Search results for "feature"

Interpretable machine learning models for single-cell ChIP-seq imputation

2019

AbstractMotivationSingle-cell ChIP-seq (scChIP-seq) analysis is challenging due to data sparsity. High degree of data sparsity in biological high-throughput single-cell data is generally handled with imputation methods that complete the data, but specific methods for scChIP-seq are lacking. We present SIMPA, a scChIP-seq data imputation method leveraging predictive information within bulk data from ENCODE to impute missing protein-DNA interacting regions of target histone marks or transcription factors.ResultsImputations using machine learning models trained for each single cell, each target, and each genomic region accurately preserve cell type clustering and improve pathway-related gene i…

Adding Domain Analysis to Software Development Method

2002

The researchers in the field of software development regard the reuse of components as one possible approach when creating quality software in less time and with fewer people. When components are used and created in the software development, one critical success factor is the use of domain analysis (DA). We report an action case study where the DA technique is first integrated into an existing software development method and then refined based on the experience of using it in a pilot project. The results indicate that our approach produces reusable components across a company-wide domain and eases the use of them in other development projects within domain.

Corrigendum to “Intelligent agents for feature modelling in computer aided design” [J. Comput. Des. Eng. (2018) 19–40]

2018

Perceptual Image Representations for Support Vector Machine Image Coding

2007

Support-vector-machine image coding relies on the ability of SVMs for function approximation. The size and the profile of the e-insensitivity zone of the support vector regressor (SVR) at some specific image representation determines (a) the amount of selected support vectors (the compression ratio), and (b) the nature of the introduced error (the compression distortion). However, the selection of an appropriate image representation is a key issue for a meaningful design of the e-insensitivity profile. For example, in image-coding applications, taking human perception into account is of paramount relevance to obtain a good rate-distortion performance. However, depending on the accuracy of t…

Convolutional Neural Networks for the Identification of Regions of Interest in PET Scans: A Study of Representation Learning for Diagnosing Alzheimer…

2017

When diagnosing patients suffering from dementia based on imaging data like PET scans, the identification of suitable predictive regions of interest (ROIs) is of great importance. We present a case study of 3-D Convolutional Neural Networks (CNNs) for the detection of ROIs in this context, just using voxel data, without any knowledge given a priori. Our results on data from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) suggest that the predictive performance of the method is on par with that of state-of-the-art methods, with the additional benefit of potential insights into affected brain regions.

A convolutional neural network framework for blind mesh visual quality assessment

2017

In this paper, we propose a new method for blind mesh visual quality assessment using a deep learning approach. To do this, we first extract visual representative features by computing locally curvature and dihedral angles from each distorted mesh. Then, we determine from these features a set of 2D patches which are learned to a convolutional neural network (CNN). The network consists of two convolutional layers with two max-pooling layers. Then, a multilayer perceptron (MLP) with two fully connected layers is integrated to summarize the learned representation into an output node. With this network structure, feature learning and regression are used to predict the quality score of a given d…

A Deep Learning Approach for Automated Fault Detection on Solar Modules Using Image Composites

2021

Aerial inspection of solar modules is becoming increasingly popular in automatizing operations and maintenance in large-scale photovoltaic power plants. Current practices are typically time-consuming as they make use of manual acquisitions and analysis of thousands of images to scan for faults and anomalies in the modules. In this paper, we explore and evaluate the use of computer vision and deep learning methods for automating the analysis of fault detection and classification in large scale photovoltaic module installations. We use convolutional neural networks to analyze thermal and visible color images acquired by cameras mounted on unmanned aerial vehicles. We generate composite images…

Feature selection using support vector machines and bootstrap methods for ventricular fibrillation detection

2012

Early detection of ventricular fibrillation (VF) is crucial for the success of the defibrillation therapy in automatic devices. A high number of detectors have been proposed based on temporal, spectral, and time-frequency parameters extracted from the surface electrocardiogram (ECG), showing always a limited performance. The combination ECG parameters on different domain (time, frequency, and time-frequency) using machine learning algorithms has been used to improve detection efficiency. However, the potential utilization of a wide number of parameters benefiting machine learning schemes has raised the need of efficient feature selection (FS) procedures. In this study, we propose a novel FS…

Texture Classification with Generalized Fourier Descriptors in Dimensionality Reduction Context: An Overview Exploration

2008

In the context of texture classification, this article explores the capacity and the performance of some combinations of feature extraction, linear and nonlinear dimensionality reduction techniques and several kinds of classification methods. The performances are evaluated and compared in term of classification error. In order to test our texture classification protocol, the experiment carried out images from two different sources, the well known Brodatz database and our leaf texture images database.

Local Feature Selection with Dynamic Integration of Classifiers

2000

Multidimensional data is often feature space heterogeneous so that individual features have unequal importance in different sub areas of the feature space. This motivates to search for a technique that provides a strategic splitting of the instance space being able to identify the best subset of features for each instance to be classified. Our technique applies the wrapper approach where a classification algorithm is used as an evaluation function to differentiate between different feature subsets. In order to make the feature selection local, we apply the recent technique for dynamic integration of classifiers. This allows to determine which classifier and which feature subset should be us…