Search results for "force"

showing 10 items of 3423 documents

Cyclic triureas—synthesis, crystal structures and properties

2008

The synthesis of 24-membered macrocycles is described, in which rigid xanthene units (X) and/or diphenyl ether units (D) as flexible analogues are linked via urea groups. All four possible combinations (XXX, XXD, XDD, DDD) have been obtained with yields of 40-72% for the cyclisation step. In two cases, the respective cyclic hexamers (XXDXXD, XXXXXX) were also isolated. Two compounds have been characterised by a single crystal X-ray analysis of the free triurea (XXD, XDD) and one example (DDD) by its complex with tetrabutylammonium chloride. It shows the chloride anion in the centre of the macrocycle, held by six NH...Cl- hydrogen bonds. The interaction with various other anions has been stu…

Models MolecularAcetonitrilesMacrocyclic CompoundsInorganic chemistryCrystallography X-RayBiochemistryChloridechemistry.chemical_compoundBromidemedicineUreaPhysical and Theoretical ChemistryAcetonitrileXantheneMolecular StructureHydrogen bondOrganic ChemistrySolvationHydrogen BondingQuaternary Ammonium CompoundsSolventCrystallographyXantheneschemistryCyclizationIntramolecular forceSpectrophotometry UltravioletChloroformCrystallizationmedicine.drugOrganic & Biomolecular Chemistry
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Tandem Nucleophilic Addition−Intramolecular Aza-Michael Reaction: Facile Synthesis of Chiral Fluorinated Isoindolines

2010

A highly stereoselective synthesis of fluorinated 1,3-disubstituted isoindolines is described. To this end, a tandem reaction consisting of a diastereoselective addition of fluorinated nucleophiles to Ellman's N-(tert-butanesulfinyl)imines followed by an intramolecular aza-Michael reaction has been developed. This strategy allows for the construction of isoindolines bearing several degrees of fluorination (mono-, di-, or trifluoromethyl as well as heavier fluorinated groups). In the majority of all cases, the products are formed as single isomers.

Models MolecularAza CompoundsIndolesTrifluoromethylNucleophilic additionHalogenationMolecular StructureTandemHydrolysisOrganic ChemistryStereoisomerismIsoindolesBiochemistryMedicinal chemistrychemistry.chemical_compoundCascade reactionchemistryNucleophileIntramolecular forceMichael reactionOrganic chemistryStereoselectivityPhysical and Theoretical ChemistryOrganic Letters
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Spectroscopic and theoretical study of the molecular and electronic structures of a terthiophene-based quinodimethane.

2004

The UV/Vis, infrared absorption, and Raman scattering spectra of 3',4'-dibutyl-5,5"-bis(dicyanomethylene)-5,5"-dihydro-2,2':5',2"-terthiophene have been analyzed with the aid of density functional theory calculations. The compound exhibits a quinoid structure in its ground electronic state and presents an intramolecular charge transfer from the terthiophene moiety to the C(CN)2 groups. The molecular system therefore consists of an electron-deficient terthiophene backbone end-capped with electron-rich C(CN)2 groups. The molecule is characterized by a strong absorption in the red, due to the HOMO-->LUMO pi-pi* electronic transition of the terthiophene backbone that shifts hypsochromically on …

Models MolecularBipolaronAbsorption spectroscopyChemistryElectronic structureThiophenesPhotochemistryCrystallography X-RayAtomic and Molecular Physics and OpticsMolecular electronic transitionDicationchemistry.chemical_compoundTerthiopheneSpectrophotometryIntramolecular forceQuinoxalinesPhysical and Theoretical ChemistryElectronicsHOMO/LUMOChemphyschem : a European journal of chemical physics and physical chemistry
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Synthesis, Crystal Structure, Magnetic Properties, and Theoretical Studies of [{Cu(mepirizole)Br}2(μ-OH)(μ-pz)] (Mepirizole = 4-Methoxy-2-(5-methoxy-…

2003

A novel mu-pyrazolato-mu-hydroxo-dibridged copper(II) complex has been synthesized and structurally characterized: [(Cu(mepirizole)Br)2(mu-OH)(mu-pz)] (mepirizole=4-methoxy-2-(5-methoxy-3-methyl-1H-pyrazol-1-yl)-6-methylpyrimidine; pz=pyrazolate). The title compound crystallizes in the monoclinic system, space group P2(1)/c, with a=15.618(2) A, b=15.369(3) A, c=16.071(3) A, and beta=112.250(1) degrees. The structure is built up of dinuclear [(Cu(mepirizole)Br)2(mu-OH)(mu-pz)] units with five-coordinated copper(II) ions (CuBrN3O chromophores) linked by mu2-OH and mu2-pyrazolato bridges that are well separated from each others. The intramolecular copper-copper distance is 3.378(3) A. Magnetic…

Models MolecularChemical PhenomenaChemistry PhysicalBand gapStereochemistryIronchemistry.chemical_elementCrystal structureChromophoreCrystallography X-RayLigandsCopperMagnetic susceptibilityIonInorganic ChemistryMagneticsCrystallographychemistryIntramolecular forceIndicators and ReagentsEpirizolePhysical and Theoretical ChemistryMonoclinic crystal systemInorganic Chemistry
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Metamorphosis of a butterfly: synthesis, structural, thermal, magnetic and DFT characterisation of a ferromagnetically coupled tetranuclear copper(ii…

2007

The reaction in water of Cu(OH)(2) with 2,2'-bipyridine (bipy) and (NH(4))(2)HPO(4) in a 4 : 4 : 2 molar ratio under an inert atmosphere leads to the formation of a tetranuclear copper(II) complex of formula {[(H(2)O)(2)Cu(4)(bipy)(4)(mu(4)-PO(4))(2)(mu(2)-OH)] x 0.5 HPO(4) x 15.5 H(2)O}, 1, with butterfly topology. The structure of the tetranuclear core in 1 consists of four crystallographically unique copper(II) ions in approximate square-pyramidal geometry with each coordinated to a bipy ligand and interacting through two mu(4)-O,O',O''-phosphate bridges. Additional bridging between Cu(3) and Cu(4) is provided by a hydroxide ligand, whereas two water molecules cap the Cu(1) and Cu(2) squ…

Models MolecularChemistryLigandInorganic chemistryTemperaturechemistry.chemical_elementChromophoreCrystallography X-RayCopperMagnetic susceptibilityIonInorganic ChemistryMagneticsCrystallographychemistry.chemical_compoundModels ChemicalIntramolecular forceOrganometallic CompoundsMoleculeHydroxideCopperDalton Transactions
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Thermal induced conformational changes involved in the aggregation pathways of beta-lactoglobulin.

2004

Aggregation of proteins appears to be associated most often with conformational and structural changes that lead to exposure of some apolar residues. Depending on the native structure of the protein in exam, aggregation is a process that involves different mechanisms, whose time of occurrence and interplay can depend upon temperature. To single out information about the multistages of the aggregation pathway, here we investigate the thermally induced conformational and structural changes of the beta-lactoglobulin (BLG). The experimental approach consists in studying steady-state fluorescence spectra of intrinsic chromophores, two tryptophans, and Anylino-Naphthalene-Sulfonate dye (ANS) mole…

Models MolecularCircular dichroismProtein DenaturationChemistryProtein ConformationSpectrum AnalysisOrganic ChemistryKineticsIntermolecular forceBiophysicsTemperatureLactoglobulinsProtein aggregationChromophoreCrystallography X-RayBiochemistryFluorescenceHydrophobic effectCrystallographyKineticsProtein structureBiophysicsDimerizationBiophysical chemistry
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Confinement inside a Crystalline Sponge Induces Pyrrole To Form N−H⋅⋅⋅π Bonded Tetramers

2021

Based on the DFT‐level calculated molecular volume (V mol ) of pyrrole and its liquid density, pyrrole manifests the highest liquid density coefficient LD c (defined as [V mol • density • 0.6023]/FW) value of 0.7. Normal liquids have LD c < 0.63. This very high LD c is due to the strong N‐H … π interactions in solution and hence pyrrole can be considered to be a pseudo‐crystalline liquid. When trapped inside the confined space of the crystalline sponge a reorientation of the N‐H … π interaction is observed leading to specific cyclic N‐H … π tetramers and N‐H … π dimers, verified by single crystal X‐ray crystallographic and computational methods. These tetramers are of the same size as four …

Models MolecularCrystallography X-Ray010402 general chemistry01 natural sciencesCatalysiskemialliset sidoksetchemistry.chemical_compoundTetramerpyrrole tetramersupramolekulaarinen kemiaconfinement effectcrystalline sponge methodhost-guest chemistryMoleculePyrrolesHost–guest chemistryConfined spacePyrroleamiinitbiology010405 organic chemistryChemistryOrganic ChemistryIntermolecular forceGeneral Chemistrypolymeriabiology.organism_classification0104 chemical sciencesSpongeCrystallographyZigzagröntgenkristallografiaaggregatioChemistry – A European Journal
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Flexible Structure of Peptide-Bound Filamin A Mechanosensor Domain Pair 20-21.

2015

Filamins (FLNs) are large, multidomain actin cross-linking proteins with diverse functions. Besides regulating the actin cytoskeleton, they serve as important links between the extracellular matrix and the cytoskeleton by binding cell surface receptors, functioning as scaffolds for signaling proteins, and binding several other cytoskeletal proteins that regulate cell adhesion dynamics. Structurally, FLNs are formed of an amino terminal actin-binding domain followed by 24 immunoglobulin-like domains (IgFLNs). Recent studies have demonstrated that myosin-mediated contractile forces can reveal hidden protein binding sites in the domain pairs IgFLNa18-19 and 20-21, enabling FLNs to transduce me…

Models MolecularDIMERIZATIONMagnetic Resonance SpectroscopyFilaminsProtein domainlcsh:MedicinePlasma protein bindingmacromolecular substancesBiologyMyosinsFilaminCrystallography X-RayLigandsfilaminsFORCEProtein structureAUTO-INHIBITIONBINDINGEscherichia coliCytoskeletonPHOSPHORYLATIONlcsh:ScienceCytoskeletonFRAGMENTMultidisciplinaryBinding Siteslcsh:Rta1182Signal transducing adaptor proteinfilamiinitSMALL-ANGLE SCATTERINGActin cytoskeletonActinsRecombinant ProteinsCell biologyProtein Structure TertiaryMODELBIOLOGICAL MACROMOLECULESCytoskeletal Proteinspeptiditpeptides1182 Biochemistry cell and molecular biologylcsh:QPeptidesINTEGRINBinding domainProtein BindingResearch ArticlePloS one
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Template-Assembled Synthetic G-Quadruplex (TASQ): A Useful System for Investigating the Interactions of Ligands with Constrained Quadruplex Topologies

2010

A new biomolecular device for investigating the interactions of ligands with constrained DNA quadruplex topologies, using surface plasmon resonance (SPR), is reported. Biomolecular systems containing an intermolecular-like G-quadruplex motif 1 (parallel G-quadruplex conformation), an intramolecular G-quadruplex 2, and a duplex DNA 3 have been designed and developed. The method is based on the concept of template-assembled synthetic G-quadruplex (TASQ), whereby quadruplex DNA structures are assembled on a template that allows precise control of the parallel G-quadruplex conformation. Various known G-quadruplex ligands have been used to investigate the affinities of ligands for intermolecular…

Models MolecularDna duplexPorphyrinsStereochemistryOligonucleotides010402 general chemistryG-quadruplexLigands01 natural sciencesCatalysischemistry.chemical_compoundStructure-Activity Relationship[CHIM.ANAL]Chemical Sciences/Analytical chemistry[CHIM]Chemical SciencesComputer SimulationBinding siteSurface plasmon resonancePromoter Regions GeneticNuclear Magnetic Resonance BiomolecularComputingMilieux_MISCELLANEOUSBinding SitesMolecular Structure010405 organic chemistryChemistryOrganic ChemistryGeneral ChemistryDNASurface Plasmon ResonanceAffinities0104 chemical sciencesQuadruplex DNAG-QuadruplexesIntramolecular forceNucleic Acid Conformation[ CHIM.ANAL ] Chemical Sciences/Analytical chemistryDNA
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Cholesterol oxidase: ultrahigh-resolution crystal structure and multipolar atom model-based analysis

2015

International audience; Author(s) of this paper may load this reprint on their own web site or institutional repository provided that this cover page is retained. Republication of this article or its storage in electronic databases other than as specified above is not permitted without prior permission in writing from the IUCr. For further information see http://journals.iucr.org/services/authorrights.html Acta Cryst. (2015). D71, 954-968 Zarychta et al. · Cholesterol oxidase research papers 954 http://dx. Examination of protein structure at the subatomic level is required to improve the understanding of enzymatic function. For this purpose, X-ray diffraction data have been collected at 100…

Models MolecularElectron densityCholesterol oxidaseProtein ConformationCrystallography X-Ray010402 general chemistry01 natural sciences03 medical and health scienceschemistry.chemical_compoundProtein structureStructural Biologycholesterol oxidase[CHIM.CRIS]Chemical Sciences/Cristallography[CHIM]Chemical Sciences030304 developmental biologyFlavin adenine dinucleotide0303 health sciencesHydrogen bondIntermolecular forceResolution (electron density)Hydrogen BondingGeneral MedicineStreptomyces0104 chemical sciencesBond lengthCrystallographychemistryFlavin-Adenine Dinucleotide
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