6533b860fe1ef96bd12c3af8

RESEARCH PRODUCT

Cyclic triureas—synthesis, crystal structures and properties

Emilie JobinFrançoise Arnaud-neuIris ThondorfSabine WernerDenys MeshcheryakovVéronique Hubscher-bruderVolker BöhmerMichael Bolte

subject

Models MolecularAcetonitrilesMacrocyclic CompoundsInorganic chemistryCrystallography X-RayBiochemistryChloridechemistry.chemical_compoundBromidemedicineUreaPhysical and Theoretical ChemistryAcetonitrileXantheneMolecular StructureHydrogen bondOrganic ChemistrySolvationHydrogen BondingQuaternary Ammonium CompoundsSolventCrystallographyXantheneschemistryCyclizationIntramolecular forceSpectrophotometry UltravioletChloroformCrystallizationmedicine.drug

description

The synthesis of 24-membered macrocycles is described, in which rigid xanthene units (X) and/or diphenyl ether units (D) as flexible analogues are linked via urea groups. All four possible combinations (XXX, XXD, XDD, DDD) have been obtained with yields of 40-72% for the cyclisation step. In two cases, the respective cyclic hexamers (XXDXXD, XXXXXX) were also isolated. Two compounds have been characterised by a single crystal X-ray analysis of the free triurea (XXD, XDD) and one example (DDD) by its complex with tetrabutylammonium chloride. It shows the chloride anion in the centre of the macrocycle, held by six NH...Cl- hydrogen bonds. The interaction with various other anions has been studied by 1H NMR. Complexation constants for chloride, bromide and acetate have been measured for all trimers by UV spectrophotometry. Molecular dynamics simulations have been carried out to determine the conformation of the free receptors in chloroform and acetonitrile. They show that in chloroform, intramolecular hydrogen bonding occasionally facilitated by trans--cis isomerisation of an amide bond dominates the conformation of the macrocycles while in acetonitrile (the solvent used for complexation measurements), the ligating urea NH protons are properly arranged for the complexation of anions, however, their strong solvation is counteractive to the complexation.

https://doi.org/10.1039/b718114k