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showing 10 items of 24643 documents

Exploiting Helminth–Host Interactomes through Big Data

2017

Helminths facilitate their parasitic existence through the production and secretion of different molecules, including proteins. Some helminth proteins can manipulate the host's immune system, a phenomenon that is now being exploited with a view to developing therapeutics for inflammatory diseases. In recent years, hundreds of helminth genomes have been sequenced, but as a community we are still taking baby steps when it comes to identifying proteins that govern host-helminth interactions. The information generated from genomic, immunomic, and proteomic studies, as well as from cutting-edge approaches such as proteogenomics, is leading to a substantial volume of big data that can be utilised…

0301 basic medicineGenome HelminthVaccinesHost (biology)business.industryHelminth proteinBig dataComputational BiologyHelminth ProteinsComputational biologyBiologyProteogenomicsHelminth GenomesProteomicsBioinformaticsHost-Parasite Interactions03 medical and health sciences030104 developmental biologyInfectious Diseasesparasitic diseasesAnimalsHumansParasitologybusinessTrends in Parasitology
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CLOVE: classification of genomic fusions into structural variation events

2017

Background A precise understanding of structural variants (SVs) in DNA is important in the study of cancer and population diversity. Many methods have been designed to identify SVs from DNA sequencing data. However, the problem remains challenging because existing approaches suffer from low sensitivity, precision, and positional accuracy. Furthermore, many existing tools only identify breakpoints, and so not collect related breakpoints and classify them as a particular type of SV. Due to the rapidly increasing usage of high throughput sequencing technologies in this area, there is an urgent need for algorithms that can accurately classify complex genomic rearrangements (involving more than …

0301 basic medicineGenomicsBiologycomputer.software_genrelcsh:Computer applications to medicine. Medical informaticsBiochemistryChromosomesDNA sequencingSet (abstract data type)Structural variationUser-Computer Interface03 medical and health sciencesStructural BiologyEscherichia coliHumansCopy-number variationMolecular Biologylcsh:QH301-705.5InternetMethodology ArticleApplied MathematicsBreakpointGenomic rearrangementsDNAGenomicsStructural variationsComputer Science ApplicationsIdentification (information)030104 developmental biologylcsh:Biology (General)Nucleic Acid ConformationGraph (abstract data type)lcsh:R858-859.7Data miningcomputerAlgorithmsBMC Bioinformatics
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Motivators, barriers and strategies of weight management: A cross-sectional study among Finnish adults.

2018

Abstract Background Weight management (WM) is an ongoing global challenge. The purpose of this study was to analyze motivators, barriers, and strategies of WM among Finnish adults. Methods Data were collected in the ‘KULUMA’ (Consumers at the Weight Management Market) project among 667 community-dwelling adults in Eastern and Central Finland (Kuopio and Jyvaskyla). The self-reported questionnaire collected background information and responses to motivators, barriers, and strategy items. Principal component analysis (PCA) was used to extract components of motivators, barriers, and strategies of WM, along with K-means clustering to categorize the participants. Results About 55% of the respond…

0301 basic medicineGerontologyBackground informationAdultMaleCross-sectional studybarriersmotivatorspainonhallintaBody Weight Maintenance03 medical and health sciences0302 clinical medicineWeight lossSurveys and QuestionnairesWeight managementWeight LossmedicineCluster AnalysisHumans030212 general & internal medicineLife Styleta515Finlandta415motivaatioMotivationPrincipal Component Analysis030109 nutrition & dieteticsMiddle AgedesteetDietstrategiatweight managementPsychiatry and Mental healthClinical PsychologyCross-Sectional StudiesCategorizationstrategiesklusterianalyysiFemalemedicine.symptomPsychologyPsychosocialFood environmentEating behaviors
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A nutrition intervention with a main focus on vegetables and bread consumption among young men in the Norwegian National Guard

2013

Background : Young men are difficult to reach with conventional nutrition information and they have a low intake of vegetables and whole grain cereals. Few intervention studies have focused on improving young men’s consumption of vegetables and whole grains. Objective : A 5-month intervention focusing on a combination of increased availability of healthy foods and nutritional information was developed to stimulate the intake of vegetables and semi-whole grain bread among a group of young men in the Norwegian military. Subjects : A total of 376 recruits in the intervention group and 105 recruits in the control group participated in the entire study. Results: The average daily increase in con…

0301 basic medicineGerontologyvegetablesbreadlcsh:TX341-641NorwegianWhole grains03 medical and health sciences0302 clinical medicineEnvironmental healthIntervention (counseling)Nutritional knowledgeMedicineNutrition information030212 general & internal medicinePublic Health NutritionWhole Grain CerealsinterventionConsumption (economics)030109 nutrition & dieteticsNutrition and Dieteticsbusiness.industryPublic Health Environmental and Occupational Healthfood and beverageslanguage.human_languageNutrition InterventionIntervention young men vegetables breadlanguageOriginal ArticleNational guardbusinessyoung menlcsh:Nutrition. Foods and food supplyFood ScienceFood & Nutrition Research
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BDE-47 exposure modulates cellular responses, oxidative stress and biotransformation related-genes in Mytilus galloprovincialis.

2020

Abstract Polybrominated diphenyl ethers (PBDEs) are flame retardants, characterized by elevated stability in the marine environment, where are accumulated by organisms, inducing a wide panel of negative effects. In this study, some biochemical patterns related to toxicity, biotransformation and oxidative stress, were studied in the marine model system, Mytilus galloprovincialis, exposed to BDE-47. Mussels were fed with microalgae, previously treated with increasing concentrations of PBDEs (maximum dose 100 ng L-1 of BDE-47 per day). After 15 days of treatment, mussels were fed with the same diet without BDE-47, for additional 15 days. Gills and digestive glands were analyzed at T 0, at 15 a…

0301 basic medicineGillanimal structuresTime FactorsGene ExpressionAquatic SciencePBDEmedicine.disease_causeAndrology03 medical and health sciencesRandom AllocationPolybrominated diphenyl ethersBiotransformationSettore AGR/20 - ZoocoltureDetoxificationGene expressionmedicineHalogenated Diphenyl EthersEnvironmental ChemistryMusselsAnimalsTissue DistributionSettore BIO/06 - Anatomia Comparata E CitologiaBiotransformationMytilusbiologyDose-Response Relationship DrugfungiCell Cycle04 agricultural and veterinary sciencesGeneral Medicinebiology.organism_classificationBioaccumulationMytilusDrug Resistance MultipleOxidative Stress030104 developmental biologyToxicityInactivation Metabolic040102 fisheries0401 agriculture forestry and fisheriesOxidative stressWater Pollutants ChemicalFishshellfish immunology
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Genetic Diversity of O-Antigens in Hafnia alvei and the Development of a Suspension Array for Serotype Detection.

2016

Hafnia alvei is a facultative and rod-shaped gram-negative bacterium that belongs to the Enterobacteriaceae family. Although it has been more than 50 years since the genus was identified, very little is known about variations among Hafnia species. Diversity in O-antigens (O-polysaccharide, OPS) is thought to be a major factor in bacterial adaptation to different hosts and situations and variability in the environment. Antigenic variation is also an important factor in pathogenicity that has been used to define clones within a number of species. The genes that are required to synthesize OPS are always clustered within the bacterial chromosome. A serotyping scheme including 39 O-serotypes has…

0301 basic medicineGlycobiologylcsh:MedicineArtificial Gene Amplification and ExtensionGenomePolymerase Chain ReactionBiochemistryDatabase and Informatics MethodsNucleic AcidsGene clusterlcsh:SciencePhylogenyGeneticsMultidisciplinaryChromosome BiologyPolysaccharides BacterialO AntigensEnzymesMultigene FamilySequence AnalysisResearch ArticleDNA Bacterial030106 microbiologySequence DatabasesBiologyResearch and Analysis MethodsSensitivity and SpecificityChromosomesBacterial genetics03 medical and health sciencesTransferasesSequence Motif AnalysisPolysaccharidesGenetic variationAntigenic variationGeneticsSerotypingMolecular Biology TechniquesSequencing TechniquesOperonsGeneMolecular BiologyGenetic diversityCircular bacterial chromosomelcsh:RGenetic VariationReproducibility of ResultsBiology and Life SciencesProteinsHafnia alveiCell BiologyDNABiosynthetic Pathways030104 developmental biologyBiological DatabasesEnzymologylcsh:QSequence AlignmentGenome BacterialPLoS ONE
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Designing food packaging for the Spanish market: Do motivations differ between involved and non-involved adolescents?

2018

Abstract This paper investigates the relationships among food choice motivations and the relevance of packaging elements (visual and informative elements) in the adolescent market. In addition, these relationships are re-tested in two different frameworks: high-involved consumers and low-involved consumers. 590 young consumers between 13 and 17 years were interviewed at the door of their public or private schools. Structural Modelling was used to test our hypotheses. The first analysis was done considering the global sample. The second one split off the sample into two groups: 351 high-involved adolescents and 239 low-involved adolescents. Our results showed, on one side, that weight contro…

0301 basic medicineHealth Knowledge Attitudes PracticeAdolescentAttitude of Health PersonnelDecision MakingSample (statistics)Product LabelingAffect (psychology)Choice BehaviorFood Preferences03 medical and health sciencesSurveys and Questionnaires0502 economics and businessFood choicemedicineHumansRelevance (information retrieval)MarketingMarketingMotivationSchools030109 nutrition & dietetics05 social sciencesCommerceFood PackagingHispanic or LatinoWeight controlConsumer BehaviorTest (assessment)Food packaging050211 marketingCuesmedicine.symptomPsychologyFood ScienceDietingFood Research International
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Honey and obesity-related dysfunctions: a summary on health benefits

2020

Honey is a natural product, containing flavonoids and phenolic acids, appreciated for its therapeutic abilities since ancient times. Although the bioactive potential is linked to the composition, that is variable depending on mainly the botanical origin, honey has antioxidant and anti-inflammatory properties. Therefore, honey, administered alone or in combination with conventional therapy, might result useful in the management of chronic diseases that are commonly associated with oxidative stress and inflammation state. Obesity is a metabolic disorder characterized by visceral adiposity. The adipose tissue becomes hypertrophic and undergoes hyperplasia, resulting in a hypoxic environment, o…

0301 basic medicineHealth StatusEndocrinology Diabetes and MetabolismClinical BiochemistryAnti-Inflammatory AgentsAdipose tissueGlycemic Controlmedicine.disease_causeBioinformaticsBiochemistryAntioxidants03 medical and health sciences0302 clinical medicineHydroxybenzoatesAnimalsHumansMedicineObesityNeurodegenerationMolecular BiologyGlycemicFlavonoidsInflammationMetabolic SyndromeHyperplasiaNutrition and Dieteticsmedicine.diagnostic_testbusiness.industryfungiMetabolic disorderNeurodegenerationPolyphenolsfood and beveragesNeurodegenerative DiseasesHoneymedicine.diseaseObesityOxidative Stress030104 developmental biologyDiabetes Mellitus Type 2HypertensionOxidative streInsulin ResistanceMetabolic syndromebusinessLipid profile030217 neurology & neurosurgeryOxidative stressThe Journal of Nutritional Biochemistry
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Analytical insight into degradation processes of aminopolyphosphonates as potential factors that induce cyanobacterial blooms

2017

Aminopolyphosphonates (AAPs) are commonly used industrial complexones of metal ions, which upon the action of biotic and abiotic factors undergo a breakdown and release their substructures. Despite the low toxicity of AAPs towards vertebrates, products of their transformations, especially those that contain phosphorus and nitrogen, can affect algal communities. To verify whether such chemical entities are present in water ecosystems, much effort has been made in developing fast, inexpensive, and reliable methods for analyzing phosphonates. However, unfortunately, the methods described thus far require time-consuming sample pretreatment and offer relatively high values of the limit of detect…

0301 basic medicineHealth Toxicology and MutagenesisMetal ions in aqueous solutionOrganophosphonatesFresh Water010501 environmental sciencesCyanobacteria01 natural sciencesChloride03 medical and health scienceschemistry.chemical_compoundSpecies SpecificitymedicineEnvironmental ChemistryOrganic chemistryDerivatization0105 earth and related environmental sciencesCyanobacterial biodegradationPollutant transformationGeneral MedicineEutrophicationPollutionDTPMPPhosphonateDecompositionAminopolyphosphonates030104 developmental biologychemistryWater pollutionGlycineOrganophosphonatesAnalytical determinationHPLCWater Pollutants Chemicalmedicine.drugResearch ArticleEnvironmental Science and Pollution Research International
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Novel deletion in 11p15.5 imprinting center region 1 in a patient with Beckwith-Wiedemann syndrome provides insight into distal enhancer regulation a…

2016

Background Beckwith–Wiedemann syndrome (BWS) is an early-onset overgrowth disorder with a high risk for embryonal tumors. It is mainly caused by dysregulation of imprinted genes on chromosome 11p15.5; however, the driving forces in the development of tumors are not fully understood. Procedure We report on a female patient presenting with macrosomia, macroglossia, organomegaly and extensive bilateral nephroblastomatosis. Adjuvant chemotherapy was initiated; however, the patient developed hepatoblastoma and Wilms tumor at 5 and 12 months of age, respectively. Subsequent radiofrequency ablation of the liver tumor and partial nephrectomy followed by consolidation therapy achieved complete remis…

0301 basic medicineHepatoblastomaPathologymedicine.medical_specialtyBeckwith-Wiedemann SyndromeBeckwith–Wiedemann syndrome030105 genetics & hereditymedicine.disease_cause03 medical and health sciencesGenomic ImprintingInsulin-Like Growth Factor IIMacroglossiaMedicineHumansImprinting (psychology)NephroblastomatosisSequence Deletionbusiness.industryChromosomes Human Pair 11Infant NewbornWilms' tumorHematologyDNA Methylationmedicine.diseasePrognosis030104 developmental biologyCell Transformation NeoplasticPhenotypeOncologyPediatrics Perinatology and Child HealthCancer researchFemalemedicine.symptombusinessGenomic imprintingCarcinogenesisPediatric bloodcancer
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