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showing 10 items of 24643 documents

Identifying potential areas of expansion for the endangered brown bear (Ursus arctos) population in the cantabrian mountains (NW Spain)

2019

Many large carnivore populations are expanding into human-modified landscapes and the subsequent increase in coexistence between humans and large carnivores may intensify various types of conflicts. A proactive management approach is critical to successful mitigation of such conflicts. The Cantabrian Mountains in Northern Spain are home to the last remaining native brown bear (Ursus arctos) population of the Iberian Peninsula, which is also amongst the most severely threatened European populations, with an important core group residing in the province of Asturias. There are indications that this small population is demographically expanding its range. The identification of the potential are…

0106 biological sciencesRange (biology)Endangered speciesForests01 natural sciencesGeographical locationsPeninsulaGeoinformaticsUrsusCarnivoreConservation ScienceMammalseducation.field_of_studyMultidisciplinarygeography.geographical_feature_categoryEcologyGeographybiologyEcologyQREukaryotaTerrestrial EnvironmentsSpatial AutocorrelationCarnivoryTrophic InteractionsHabitatsEuropeCommunity EcologyHabitatVertebratesMedicineUrsidaeResearch ArticleComputer and Information SciencesSciencePopulationBears010603 evolutionary biologyEcosystemsPopulation MetricsAnimalsHumansEuropean Union14. Life underwatereducationEcosystemPopulation DensitygeographyPopulation Biology010604 marine biology & hydrobiologyEcology and Environmental SciencesOrganismsBiology and Life Sciences15. Life on landbiology.organism_classificationSpainAmniotesThreatened speciesEarth SciencesPeople and places
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Large Spatial Scale of the Phenotype-Environment Color Matching in Two Cryptic Species of African Desert Jerboas (Dipodidae: Jaculus)

2014

We tested the camouflage hypothesis, or the linkage between animal (Saharan rodent) and habitat coloration, on the largest geographical scale yet conducted. We aimed to determine whether phenotypic variation is explained by micro-habitat variation and/or genetic polymorphism to determine 1) the strength of linkage between fur color and local substrate color, and 2) the divergence in fur coloration between two genetic clades, representing cryptic species, throughout the complete range of the African desert jerboas (Jaculus jaculus). We used a combination of museum and field-collected specimens, remote sensing tools, satellite and digital photography and molecular genetic and phylogenetic met…

0106 biological sciencesRange (biology)Skin Pigmentation01 natural sciencesDipodidaeJaculus jaculusGeoinformaticsPhylogeny0303 health sciencesMultidisciplinaryRemote Sensing ImageryPhylogenetic treeEcologyGeographyPigmentationQRCytochromes cBiological EvolutionPhenotypeSympatric speciationMedicineResearch ArticleSpecies complexComputer and Information SciencesScienceZoologyRodentiaBiologyEnvironment010603 evolutionary biology03 medical and health sciencesGenetic variationAnimalsSelection Genetic030304 developmental biologyEvolutionary BiologySpatial AnalysisPolymorphism GeneticEcology and Environmental SciencesBiology and Life SciencesGenetic Variation15. Life on landbiology.organism_classificationGenetic divergenceHaplotypesEvolutionary EcologyRemote Sensing TechnologyEarth Sciencesta1181HairPlos One
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Can video playback provide social information for foraging blue tits?

2017

Video playback is becoming a common method for manipulating social stimuli in experiments. Parid tits are one of the most commonly studied groups of wild birds. However, it is not yet clear if tits respond to video playback or how their behavioural responses should be measured. Behaviours may also differ depending on what they observe demonstrators encountering. Here we present blue tits (Cyanistes caeruleus) videos of demonstrators discovering palatable or aversive prey (injected with bittertasting Bitrex) from coloured feeding cups. First we quantify variation in demonstrators’ responses to the prey items: aversive prey provoked high rates of beak wiping and head shaking. We then show tha…

0106 biological sciencesSELECTIONForage (honey bee)Computer scienceForagingsocial information uselcsh:MedicineCommon methodECOLOGY010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyPredationMECHANISMSSYSTEMS0501 psychology and cognitive sciences050102 behavioral science & comparative psychologySocial informationCommunicationblue titsbiologyAnimal Behaviorbusiness.industryGeneral Neuroscience05 social sciencesCyanisteslcsh:RANIMALSGeneral MedicineSocial cuebiology.organism_classificationEvolutionary StudiesGALLUS-GALLUSBeakSTIMULI1181 Ecology evolutionary biologyZEBRA FINCHESMATEta1181General Agricultural and Biological Sciencesbusinessvideo-playbackBEHAVIORPeerJ
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Parasite-induced behavioral change: mechanisms.

2010

Animal behavior and parasitism are more tightly linked than commonly thought. One of the most astonishing phenomena in host–parasite antagonistic interactions is ‘host manipulation,’ that is, the ability of a parasite to alter the behavior of its host in ways that appear to increase parasite fitness at the expense of host fitness. The mechanisms by which a parasite hijacks the behavior of its host have been explored using ethopharmacological and immunocytochemical approaches or carrying out a large-scale proteomic study on manipulated host’s brain. These few mechanistic studies have confirmed both the complexity of host manipulation by parasites and the importance of understanding the molec…

0106 biological sciencesSerotonin[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyProteomeParasitismBiologyBioinformatics010603 evolutionary biology01 natural sciencesRodentsTranscriptome03 medical and health sciences[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hosting[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyAnimal behavior030304 developmental biology0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyHost (biology)Phenotype3. Good healthCrustaceansNeuromodulatorInsectsParasiteEvolutionary biologyProteome[SDE.BE]Environmental Sciences/Biodiversity and EcologyEthopharmacologyTranscriptome[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Temporal and spatial patterns of trawl fishing activities in the Adriatic Sea (Central Mediterranean Sea, GSA17)

2020

Abstract Trawl fishing activities have occurred for centuries on large spatial scale in the entire Mediterranean Sea, and today they are considered as one of the main and widespread causes of anthropogenic disturbance and habitat alteration in the marine environment. In order to delineate when, where and how marine ecosystems have been perturbed and to implement ecosystem-based management strategies, the identification and investigation of the spatial and temporal distribution of fishing effort and the fleet dynamics play a key role. In this context, Geospatial Technologies such as the Automatic Identification System (AIS) could represent a useful tool. The aim of the present work is to rec…

0106 biological sciencesSettore BIO/07 - Ecologia010504 meteorology & atmospheric sciencesHigh resolution mapsFishingContext (language use)Management Monitoring Policy and LawAquatic ScienceOceanography01 natural sciencesMediterranean seaFishing effortMarine ecosystemEcosystem14. Life underwaterAIS; Fishery management; Fishing effort; High resolution maps; Swept area; Trawl fishery0105 earth and related environmental sciencesSettore INF/01 - InformaticaTrawling010604 marine biology & hydrobiologyAISFishery managementFisheryGeographyHabitatTrawl fisherySpatial ecologySettore ING-INF/05 - Sistemi di Elaborazione delle InformazioniSwept area
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From elicitins to lipid-transfer proteins: a new insight in cell signalling involved in plant defence mechanisms.

2002

Elicitins and lipid-transfer proteins are small cysteine-rich lipid-binding proteins secreted by oomycetes and plant cells, respectively, that share some structural and functional properties. In spite of intensive work on their structure and diversity at the protein and genetic levels, the precise biological roles of lipid-transfer proteins remains unclear, although the most recent data suggest a role in somatic embryogenesis, in the formation of protective surface layers and in defence against pathogens. By contrast, elicitins are known elicitors of plant defence, and recent work demonstrating that elicitins and lipid-transfer proteins share the same biological receptors gives a new perspe…

0106 biological sciencesSomatic embryogenesisProtein ConformationDefence mechanismsPlant ScienceBiology01 natural sciencesFungal Proteins03 medical and health sciencesErgosterolReceptor030304 developmental biologyPlant DiseasesPlant Proteins0303 health sciencesBinding proteinAlgal ProteinsLysophosphatidylcholinesProteinsElicitinAntigens PlantLipidsImmunity InnateBiochemistryOomycetesProtein-lipid complexStress MechanicalSignal transductionCarrier ProteinsPlant lipid transfer proteins010606 plant biology & botanySignal TransductionTrends in plant science
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A global occurrence database of the Atlantic blue crab Callinectes sapidus

2021

The Atlantic blue crab Callinectes sapidus is a portunid native to the western Atlantic, from New England to Uruguay. The species was introduced in Europe in 1901 where it has become invasive; additionally, a significant northward expansion has been emphasized in its native range. Here we present a harmonized global compilation of C. sapidus occurrences from native and non-native distribution ranges derived from online databases (GBIF, BISON, OBIS, and iNaturalist) as well as from unpublished and published sources. The dataset consists of 40,388 geo-referenced occurrences, 39,824 from native and 564 from non-native ranges, recorded in 53 countries. The implementation of quality controls imp…

0106 biological sciencesStatistics and ProbabilityData DescriptorCallinectesRange (biology)BrachyuraScienceLibrary and Information Sciencescomputer.software_genre010603 evolutionary biology01 natural sciencesEducationNew englandAnimalsMacroecologyInvasive speciesDatabasebiologyAnimal010604 marine biology & hydrobiologyQinvasive species blue crab global occurrence databaseBiodiversitybiology.organism_classificationComputer Science ApplicationsGeographyBiogeographyStatistics Probability and UncertaintyIntroduced SpeciescomputerAnimal DistributionInformation SystemsScientific Data
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Hierarchical log Gaussian Cox process for regeneration in uneven-aged forests

2021

We propose a hierarchical log Gaussian Cox process (LGCP) for point patterns, where a set of points x affects another set of points y but not vice versa. We use the model to investigate the effect of large trees to the locations of seedlings. In the model, every point in x has a parametric influence kernel or signal, which together form an influence field. Conditionally on the parameters, the influence field acts as a spatial covariate in the intensity of the model, and the intensity itself is a non-linear function of the parameters. Points outside the observation window may affect the influence field inside the window. We propose an edge correction to account for this missing data. The par…

0106 biological sciencesStatistics and ProbabilityFOS: Computer and information sciences62F15 (Primary) 62M30 60G55 (Secondary)MCMCGaussianBayesian inferenceMarkovin ketjutStatistics - Applications010603 evolutionary biology01 natural sciencesCox processMethodology (stat.ME)010104 statistics & probabilitysymbols.namesakeregeneraatio (biologia)Applied mathematicsApplications (stat.AP)0101 mathematicsLaplace approximationStatistics - MethodologyGeneral Environmental ScienceParametric statisticsMathematicsspatial random effectsbayesilainen menetelmäMarkov chain Monte CarloFunction (mathematics)15. Life on landMissing dataMonte Carlo -menetelmätcompetition kernelLaplace's methodKernel (statistics)symbolstree regenerationpuustometsänhoitomatemaattiset mallitStatistics Probability and Uncertainty
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The "Tracked Roaming Transect" and distance sampling methods increase the efficiency of underwater visual censuses.

2018

Underwater visual census (UVC) is the most common approach for estimating diversity, abundance and size of reef fishes in shallow and clear waters. Abundance estimation through UVC is particularly problematic in species occurring at low densities and/or highly aggregated because of their high variability at both spatial and temporal scales. The statistical power of experiments involving UVC techniques may be increased by augmenting the number of replicates or the area surveyed. In this work we present and test the efficiency of an UVC method based on diver towed GPS, the Tracked Roaming Transect (TRT), designed to maximize transect length (and thus the surveyed area) with respect to diving …

0106 biological sciencesTopographyMarine and Aquatic Scienceslcsh:Medicine01 natural sciences//purl.org/becyt/ford/1 [https]Abundance (ecology)StatisticsRange (statistics)Marine Fishlcsh:ScienceIslandsAbundance estimationMultidisciplinaryDistance samplingUnderwater visual censusesAnimal BehaviorEcologyCoral ReefsGeographic Information SystemFishesEukaryotaEstimatorBiodiversityResearch DesignVertebratesEngineering and TechnologyCoral ReefCIENCIAS NATURALES Y EXACTASHumanResearch ArticleEnvironmental MonitoringCensusAccuracy and precisionFish BiologyField experimentEquipmentMarine BiologyResearch and Analysis Methods010603 evolutionary biologyCiencias BiológicasFish PhysiologyAnimal PhysiologyAnimalsHumans14. Life underwater//purl.org/becyt/ford/1.6 [https]TransectVision OcularBehaviorLandformsSurvey ResearchAnimal010604 marine biology & hydrobiologyEcology and Environmental Scienceslcsh:ROrganismsBiology and Life SciencesGeomorphologyEcologíaVertebrate PhysiologyTracked roaming transectFishEarth SciencesReefsGeographic Information SystemsEnvironmental sciencelcsh:QZoologyFishePLoS ONE
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An air-lift biofilm reactor for the production of γ-decalactones by Yarrowia lipolytica

2014

Decalactones are interesting flavouring compounds that can be produced from ricinoleic acid. In this study, the production of lactones in biofilms using Yarrowia lipolytica is investigated. The hydrophobia of cells increased for increased aeration rates resulting in higher adhesion when the reactor wall was hydrophobic (plastic). To increase adhesion, sheets of methyl-polymethacrylate (PMMA) were added in the reactor and the production of lactones increased with the surface of plastic added, reaching 850 mg/L of 3-hydroxy-γ-decalactone for 60 cm2. In an Airlift bioreactor made of PMMA, biofilms were present at the top of the reactor for increased aeration. In the meantime, a metabolic shift…

0106 biological sciencesYarrowia lipolytica[SDV]Life Sciences [q-bio]Ricinoleic acidBioengineeringHydrophobiaβ-Oxidation01 natural sciencesApplied Microbiology and BiotechnologyBiochemistryBiofilm reactor03 medical and health scienceschemistry.chemical_compound010608 biotechnologySurface properties[SDV.IDA]Life Sciences [q-bio]/Food engineeringBioreactorß-Oxidationcvg030304 developmental biology0303 health sciencesScience & TechnologybiologyChemistryLipid biotransformationcvg.computer_videogameAirliftBiofilmYarrowiabiology.organism_classification6. Clean waterYeastChemical engineeringBiochemistryAerationAroma production
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