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Characterization of the Copper Transporters from Lotus spp. and Their Involvement under Flooding Conditions

2019

Forage legumes are an important livestock nutritional resource, which includes essential metals, such as copper. Particularly, the high prevalence of hypocuprosis causes important economic losses to Argentinian cattle agrosystems. Copper deficiency in cattle is partially due to its low content in forage produced by natural grassland, and is exacerbated by flooding conditions. Previous results indicated that incorporation of Lotus spp. into natural grassland increases forage nutritional quality, including higher copper levels. However, the biological processes and molecular mechanisms involved in copper uptake by Lotus spp. remain poorly understood. Here, we identify four genes that encode p…

0106 biological sciences0301 basic medicineBiologíalegumesLotusCOPPERFLOODING01 natural scienceslcsh:ChemistryCopper transportersProtein-fragment complementation assayCation Transport Proteinslcsh:QH301-705.5SpectroscopyPlant Proteinsbiologyfood and beveragesGeneral MedicinePhenotypeComputer Science ApplicationsLEGUMESSaccharomyces cerevisiaechemistry.chemical_elementCatalysisArticleInorganic Chemistry03 medical and health sciencesfloodingStress PhysiologicalFORAGEBotanymedicineCiencias AgrariasPhysical and Theoretical ChemistryMolecular BiologyGeneOrganic Chemistryfungiforagebiology.organism_classificationmedicine.disease//purl.org/becyt/ford/4.5 [https]CopperTRANSPORTERScopper transportersYeastFloods030104 developmental biologychemistrylcsh:Biology (General)lcsh:QD1-999CIENCIAS AGRÍCOLASLotusOtras Ciencias AgrícolasCopper deficiency//purl.org/becyt/ford/4 [https]Copper010606 plant biology & botanyInternational Journal of Molecular Sciences
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Specific binding of Bacillus thuringiensis Cry1Ea toxin, and Cry1Ac and Cry1Fa competition analyses in Anticarsia gemmatalis and Chrysodeixis include…

2019

AbstractAnticarsia gemmatalis (velvetbean caterpillar) and Chrysodeixis includens (soybean looper) are two important defoliation pests of soybeans. In the present study, we have investigated the susceptibility and brush border membrane-binding properties of both species to Bacillus thuringiensis Cry1Ea toxin. Bioassays performed in first-instar larvae demonstrated potent activity against both soybean pests in terms of mortality or practical mortality. Competition-binding studies carried out with 125Iodine-labelled Cry1Ea, demonstrated the presence of specific binding sites on the midgut brush border membrane vesicles (BBMV) of both insect species. Heterologous competition-binding experiment…

0106 biological sciences0301 basic medicineBrush borderlcsh:MedicineMoths01 natural sciencesArticleMicrobiologyApplied microbiology03 medical and health sciencesHemolysin ProteinsBacterial ProteinsChrysodeixis includensBacillus thuringiensisEnvironmental biotechnologyAnimalsCaterpillarlcsh:ScienceMultidisciplinaryBinding SitesbiologyBacillus thuringiensis ToxinsMicrovillifungilcsh:Rfood and beveragesMidgutbiology.organism_classificationEndotoxins010602 entomologyAnticarsia gemmatalis030104 developmental biologyCry1AcBiological Control AgentsLarvaBiological Assaylcsh:QPEST analysisSoybeansScientific Reports
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A Model for ERD2 Function in Higher Plants

2020

ER lumenal proteins have a K(H)DEL motif at their C-terminus. This is recognized by the ERD2 receptor (KDEL receptor in animals), which localizes to the Golgi apparatus and serves to capture escaped ER lumenal proteins. ERD2-ligand complexes are then transported back to the ER via COPI coated vesicles. The neutral pH of the ER causes the ligands to dissociate with the receptor being returned to the Golgi. According to this generally accepted scenario, ERD2 cycles between the ER and the Golgi, although it has been found to have a predominant Golgi localization. In this short article, we present a model for the functioning of ERD2 receptors in higher plants that explains why it is difficult t…

0106 biological sciences0301 basic medicineCOPI-Coated Vesiclescis-GolgiKDELMini ReviewPopulationPlant Sciencelcsh:Plant culture01 natural sciences03 medical and health sciencessymbols.namesakeERD2/KDEL receptorlcsh:SB1-1110Neutral phGolgi localizationeducationReceptorCOPII-vesicleeducation.field_of_studyChemistryGolgi apparatusCell biologysecretory unit030104 developmental biologyCOPI-vesiclesymbolsK(H)DEL ligandFunction (biology)010606 plant biology & botanyFrontiers in Plant Science
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Transcriptional responses to pre-flowering leaf defoliation in grapevine berry from different growing sites, years, and genotypes

2017

Leaf removal is a grapevine canopy management technique widely used to modify the source–sink balance and/or microclimate around berry clusters to optimize fruit composition. In general, the removal of basal leaves before flowering reduces fruit set, hence achieving looser clusters, and improves grape composition since yield is generally curtailed more than proportionally to leaf area itself. Albeit responses to this practice seem quite consistent, overall vine performance is affected by genotype, environmental conditions, and severity of treatment. The physiological responses of grape varieties to defoliation practices have been widely investigated, and just recently a whole genome trans…

0106 biological sciences0301 basic medicineCanopyBerry transcriptome; Flavonoid; Grapevine; Pre-flowering defoliation; Secondary metabolite; Plant ScienceBerry transcriptomeBerryPlant Sciencelcsh:Plant cultureBiology01 natural sciencesTranscriptomeCropSecondary metabolite03 medical and health scienceschemistry.chemical_compoundAuxinSettore AGR/07 - Genetica AgrariaBotanylcsh:SB1-1110JasmonateAbscisic acidOriginal Research2. Zero hungerchemistry.chemical_classificationfungifood and beveragesRipening15. Life on landPre-flowering defoliationberry transcriptome; flavonoid; grapevine; pre-flowering defoliation; secondary metaboliteSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboree030104 developmental biologychemistryFlavonoidGrapevine010606 plant biology & botany
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Role of Bacillus thuringiensis Cry1A toxins domains in the binding to the ABCC2 receptor from Spodoptera exigua

2018

Abstract Cry proteins from Bacillus thuringiensis (Bt) have been used to control insect pests either as formulated sprays or as in Bt-crops. However, field-evolved resistance to Bt proteins is threatening the long-term use of Bt products. The SeABCC2 locus has been genetically linked to resistance to a Bt bioinsecticide (Xentari™) in Spodoptera exigua (a mutation producing a truncated form of the transporter lacking an ATP binding domain was found in the resistant insects). Here, we investigated the role of SeABCC2 in the mode of action of Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ca, and two Cry1A-1Ca hybrids by expressing the receptor in Sf21 and HEK293T cell lines. Cell toxicity assays showed that Sf2…

0106 biological sciences0301 basic medicineCell SurvivalBacillus thuringiensisGene ExpressionSpodopteraSpodopteraTransfection01 natural sciencesBiochemistryHemolysin ProteinsStructure-Activity Relationship03 medical and health sciencesBacterial ProteinsProtein DomainsBacillus thuringiensisExiguaSf9 CellsAnimalsHumansProtein IsoformsBinding siteReceptorMolecular BiologySf21Binding SitesBacillus thuringiensis Toxinsbiologyfungibiology.organism_classificationMultidrug Resistance-Associated Protein 2Recombinant ProteinsClone CellsEndotoxins010602 entomologyHEK293 Cells030104 developmental biologyBiochemistryCry1AcLarvaInsect ScienceMutationInsect ProteinsMultidrug Resistance-Associated ProteinsPlasmidsProtein BindingBinding domainInsect Biochemistry and Molecular Biology
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To move or not to move: roles and specificity of plant RNA mobility

2020

Intercellular communication in plants coordinates cellular functions during growth and development, and in response to environmental cues. RNAs figure prominently among the mobile signaling molecules used. Many hundreds of RNA species move over short and long distances, and can be mutually exchanged in biotic interactions. Understanding the specificity determinants of RNA mobility and the physiological relevance of this phenomenon are areas of active research. Here, we highlight the recent progress in our knowledge of small RNA and messenger RNA movement. Particular emphasis is given to novel insight into the specificity determinants of messenger RNA mobility, the role of small RNA movement…

0106 biological sciences0301 basic medicineCell signalingMessenger RNASmall RNAfungiCellular functionsfood and beveragesRNA transportRNACell CommunicationPlant ScienceComputational biologyPlantsBiology01 natural sciencesRNA Transport03 medical and health sciences030104 developmental biologyRNA PlantRNA MessengerPlant metabolism010606 plant biology & botanyCurrent Opinion in Plant Biology
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A non-venomous sPLA2 of a lepidopteran insect: Its physiological functions in development and immunity

2018

Eicosanoids are oxygenated C20 polyunsaturated fatty acids that mediate various physiological processes in insects. Eicosanoid biosynthesis begins with a C20 precursor, arachidonic acid (5,8,11,14-eicosatetraenoic acid: AA). AA is usually released from phospholipids at sn-2 position by catalytic activity of phospholipase A2 (PLA2). Although various PLA2s classified into 16 gene families (= Groups) are known in various biological systems, few PLA2s are known in insects. Only two PLA2s involved in intracellular calcium independent PLA2 (iPLA2) group have been identified in lepidopteran insects with well known eicosanoid physiology. This study reports the first secretory PLA2 (sPLA2) in lepido…

0106 biological sciences0301 basic medicineCellular immunitybiologyfungiImmunologySpodopterabiology.organism_classification01 natural sciences010602 entomology03 medical and health sciencesOpen reading framechemistry.chemical_compound030104 developmental biologyPhospholipase A2BiochemistrychemistryJuvenile hormoneExiguabiology.proteinlipids (amino acids peptides and proteins)Arachidonic acidPeptide sequenceDevelopmental BiologyDevelopmental & Comparative Immunology
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Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species.

2018

International audience; Chloroplast sequences are widely used for phylogenetic analysis due to their high degree of conservation in plants. Whole chloroplast genomes can now be readily obtained for plant species using new sequencing methods, giving invaluable data for plant evolution However new annotation methods are required for the efficient analysis of this data to deliver high quality phylogenetic analyses. In this study, the two main tools for chloroplast genome annotation were compared. More consistent detection and annotation of genes were produced with GeSeq when compared to the currently used Dogma. This suggests that the annotation of most of the previously annotated chloroplast …

0106 biological sciences0301 basic medicineChloroplastsPlant GenomesPlant SciencePlant Genetics01 natural sciencesGenomeCoffeeDatabase and Informatics MethodsPlant GenomicsPlastidsPhylogenyData Management2. Zero hungerPlant evolutionMultidisciplinarybiologyPhylogenetic treeQRfood and beveragesPhylogenetic AnalysisGenome projectGenomicsPhylogenetics[INFO.INFO-MA]Computer Science [cs]/Multiagent Systems [cs.MA]MedicineEngineering and Technology[INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]Cellular Structures and OrganellesCellular TypesSequence AnalysisResearch ArticleBiotechnologyComputer and Information SciencesBioinformaticsSciencePlant Cell BiologyBioengineering[INFO.INFO-SE]Computer Science [cs]/Software Engineering [cs.SE]Coffea canephoraGenes PlantResearch and Analysis Methods010603 evolutionary biology[INFO.INFO-IU]Computer Science [cs]/Ubiquitous ComputingEvolution Molecular[INFO.INFO-CR]Computer Science [cs]/Cryptography and Security [cs.CR]03 medical and health sciencesPhylogeneticsChloroplast GenomePlant CellsGeneticsEvolutionary SystematicsGenome ChloroplastTaxonomyEvolutionary BiologyCoffea arabicaCoffeafungiBiology and Life SciencesComputational BiologyMolecular Sequence AnnotationSequence Analysis DNACell Biology15. Life on landbiology.organism_classificationGenome Analysis[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationGenome Annotation030104 developmental biologyEvolutionary biology[INFO.INFO-ET]Computer Science [cs]/Emerging Technologies [cs.ET]Plant BiotechnologySequence AlignmentPloS one
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Marine protected areas rescue a sexually selected trait in European lobster

2020

Abstract Marine protected areas (MPAs) are increasingly implemented worldwide to maintain and restore depleted populations. However, despite our knowledge on the myriad of positive responses to protection, there are few empirical studies on the ability to conserve species’ mating patterns and secondary sexual traits. In male European lobsters (Homarus gammarus), the size of claws relative to body size correlates positively with male mating success and is presumably under sexual selection. At the same time, an intensive trap fishery exerts selection against large claws in males. MPAs could therefore be expected to resolve these conflicting selective pressures and preserve males with large cl…

0106 biological sciences0301 basic medicineClawanimal structuresmedia_common.quotation_subjectlcsh:Evolution010603 evolutionary biology01 natural sciencesCompetition (biology)secondary sexual trait03 medical and health sciencesHomarus gammaruslcsh:QH359-425Geneticssexual selectionclawsHomarus gammarusMatingVDP::Landbruks- og Fiskerifag: 900::Fiskerifag: 920Ecology Evolution Behavior and Systematicsmedia_commonbiologyselective harvestingfungiMarine reservefisheries‐induced evolutionmarine reservesVDP::Matematikk og Naturvitenskap: 400Original Articlesbiology.organism_classificationMating systemFishery030104 developmental biologySexual selectiontrap fisheriesOriginal ArticleMarine protected areaGeneral Agricultural and Biological SciencesEvolutionary Applications
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Microspore Embryogenesis Through Anther Culture in Citrus clementina Hort. ex Tan.

2016

Anther culture is a biotechnological method that allows to obtain, in one step, homozygous plants, very important to plant breeding, due to their numerous applications in mutation research, selection, genome sequencing, genetic analysis, and transformation. To induce the microspores, i.e., the immature male gametes, to switch from the normal gametophytic pathway to the sporophytic one, it is necessary to submit them to a type of stress, such as high or low temperature, starvation, or magnetic field. Stress can be applied to the donor plants and/or the fl oral buds or the anthers or the isolated microspores, before or during the culture. In this chapter, the protocol to induce gametic embryo…

0106 biological sciences0301 basic medicineClementineAnther cultureCitruStamenMicrospore embryogenesiPlant DevelopmentGerminationBreedingHaploidyBiologymedicine.disease_cause01 natural sciencesGenetic analysis03 medical and health sciencesMicrosporePollenBotanyGeneticsmedicinePlant breedingCultivarMolecular BiologyPlant Somatic Embryogenesis TechniqueSomatic embryogenesifungiEmbryogenesisGametic embryogenesifood and beveragesSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeTransformation (genetics)030104 developmental biologyIsolated microspore cultureDoubled haploidPollenTissue Culture TechniqueGenome Plant010606 plant biology & botany
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