Search results for "functions"
showing 10 items of 1066 documents
Experimental community coalescence sheds light on microbial interactions in soil and restores impaired functions
2023
Abstract Background Microbes typically live in communities where individuals can interact with each other in numerous ways. However, knowledge on the importance of these interactions is limited and derives mainly from studies using a limited number of species grown in coculture. Here, we manipulated soil microbial communities to assess the contribution of interactions between microorganisms for assembly of the soil microbiome. Results By combining experimental removal (taxa depletion in the community) and coalescence (mixing of manipulated and control communities) approaches, we demonstrated that interactions between microorganisms can play a key role in determining their fitness during soi…
Metagenomics of human microbiome: beyond 16s rDNA.
2012
Clin Microbiol Infect 2012; 18 (Suppl. 4): 4749 Abstract The gut microbiota presents a symbiotic relationship with the human host playing a beneficial role in human health. Since its establishment, the bacterial community is subjected to the influence of many different factors that shape its composition within each individual. However, an important convergence is observed at functional level in the gut microbiota. A metatranscriptomic study of healthy individuals showed homogeneity in the composition of the active microbiota that increased further at functional level.
The complete mitochondrial genome of Bactrocera biguttula (Bezzi) (Diptera: Tephritidae) and phylogenetic relationships with other Dacini
2018
Bactrocera biguttula is an African olive fruit fly that does not attack cultivated olives but rather develops in the fruits of wild species of Olea and Noronhia. The complete mitochondrial genome of an individual specimen was characterized in comparison to other Bactrocera. The phylogenetic relationships of B. biguttula with other Dacini were investigated, with special focus on B. oleae, an agricultural pest known to attack cultivated and wild olives. The sequence had a total length of 15,829 bp, and included the typical features of insect mitogenomes, similarly to the other Bactrocera analysed. Start codons included ATG, ATC, ATT, and TCG (in COI). The majority of stop codons (TAA) were fu…
Adaptive estimation of Laguerre models with time-varying delay
2000
Abstract An Orthonormal Basis Functions (OBF) approach is effectively used in adaptive parameter estimation of linear(ized) open-loop stable, possibly nonminimum phase plants with time-varying delay. In particular, discrete Laguerre models are considered in detail. A special attention is paid to the numerical conditioning issue in case of ’poor’ excitation of a plant under control, where OBF models are of particular value. Closed-loop predictive control simulations confirm the usefulness of adaptive OBF modelling, especially for systems with time-varying delays.
Modelling Photoionisation in Isocytosine: Potential Formation of Longer‐Lived Excited State Cations in its Keto Form
2021
Abstract Studying the effects of UV and VUV radiation on non‐canonical DNA/RNA nucleobases allows us to compare how they release excess energy following absorption with respect to their canonical counterparts. This has attracted much research attention in recent years because of its likely influence on the origin of our genetic lexicon in prebiotic times. Here we present a CASSCF and XMS‐CASPT2 theoretical study of the photoionisation of non‐canonical pyrimidine nucleobase isocytosine in both its keto and enol tautomeric forms. We analyse their lowest energy cationic excited states including 2π+ , 2nO+ and 2nN+ and compare these to the corresponding electronic states in cytosine. Investigat…
MR2524292 (2010f:26007): Kolyada, V. I.; Lind, M. On functions of bounded p-variation. J. Math. Anal. Appl. 356 (2009), no. 2, 582–604. (Reviewer: Lu…
2009
For p∈(1,+∞), let f∈Lp be a 1-periodic function on the real line, with the norm of f given by ∥f∥p=(∫10|f(x)|pdx)1/p. The Lp-modulus of continuity of f is defined by ω(f,δ)p=sup0≤h≤δ(∫10|f(x+h)−f(x)|pdx)1/p, 0≤δ≤1. A partition of period 1 (or simply a partition) is a set Π={x0,x1,…,xn} of points such that x0<x1<…<xn=x0+1. For a given partition Π={x0,x1,…,xn} let vp(f;Π)=(∑k=0n−1|f(xk+1)−f(xk)|p)1/p. The modulus of p-continuity of f is defined by ω1−1/p(f,δ)=sup∥Π∥≤δvp(f;Π), where the supremum is taken over all partitions Π such that ∥Π∥=maxk(xk+1−xk)≤δ. In this paper, improving a previous estimate given by A. P. Terehin [Mat. Zametki 2 (1967), 289--300; MR0223512 (36 #6560)], it is shown th…
Selection on Coding Regions Determined Hox7 Genes Evolution
2003
The important role of Hox genes in determining the regionalization of the body plan of the vertebrates makes them invaluable candidates for evolutionary analyses regarding functional and morphological innovation. Gene duplication and gene loss led to a variable number of Hox genes in different vertebrate lineages. The evolutionary forces determining the conservation or loss of Hox genes are poorly understood. In this study, we show that variable selective pressures acted on Hox7 genes in different evolutionary lineages, with episodes of positive selection occurring after gene duplications. Tests for functional divergence in paralogs detected significant differentiation in a region known to …
The origin of Lecithodesmus (Digenea: Campulidae) based on ND3 gene comparison
2000
Species of Lecithodesmus (Campulidae) occur almost exclusively in baleen whales throughout a wide geographical distribution. Other campulids occur only in odontocetes and, secondarily, in pinnipeds and the sea otter. Therefore, the ancestor of Lecithodesmus might have either cospeciated with mysticetes during the early divergence of mysticete and odontocete cetaceans or originated later via host switching. We evaluate both possibilities based on a phylogenetic analysis. The ND3 mitochondrial gene sequence of a species of Lecithodesmus was included in a previous partial molecular phylogeny of the Campulidae. Fasciola hepatica and Dicrocoelium dendriticum were used as outgroups. Maximum parsi…
Millimeter-Scale and Billion-Atom Reactive Force Field Simulation on Sunway Taihulight
2020
Large-scale molecular dynamics (MD) simulations on supercomputers play an increasingly important role in many research areas. With the capability of simulating charge equilibration (QEq), bonds and so on, Reactive force field (ReaxFF) enables the precise simulation of chemical reactions. Compared to the first principle molecular dynamics (FPMD), ReaxFF has far lower requirements on computational resources so that it can achieve higher efficiencies for large-scale simulations. In this article, we present our efforts on scaling ReaxFF on the Sunway TaihuLight Supercomputer (TaihuLight). We have carefully redesigned the force analysis and neighbor list building steps. By applying fine-grained …
On the definition of viscosity solutions for parabolic equations
2001
In this short note we suggest a refinement for the definition of viscosity solutions for parabolic equations. The new version of the definition is equivalent to the usual one and it better adapts to the properties of parabolic equations. The basic idea is to determine the admissibility of a test function based on its behavior prior to the given moment of time and ignore what happens at times after that.