Search results for "gastroenteritis"

showing 10 items of 135 documents

Genetic heterogeneity of porcine enteric caliciviruses identified from diarrhoeic piglets

2008

Enteric caliciviruses (noroviruses and sapoviruses) are responsible for the majority of non-bacterial gastroenteritis in humans of all age groups. Analysis of the polymerase and capsid genes has provided evidence for a huge genetic diversity, but the understanding of their ecology is limited. In this study, we investigated the presence of porcine enteric caliciviruses in the faeces of piglets with diarrhoea. A total of 209 samples from 118 herds were analysed and calicivirus RNA was detected by RT-PCR in 68 sample (32.5%) and in 46 herds (38.9%), alone or in mixed infection with group A and C rotaviruses. Sequence and phylogenetic analysis of the calicivirus-positive samples characterized t…

DiarrheaRotavirusmedicine.medical_specialtySettore MED/07 - Microbiologia E Microbiologia ClinicaGenes ViralSwineanimal diseasesvirusesMolecular Sequence DataBiologymedicine.disease_causeRotavirus InfectionsEnteritis Porcine calicivirus SapovirusEnteritisMicrobiologyFecesfluids and secretionsMedical microbiologyVirologyGenetic variationGeneticsmedicineAnimalsHumansAmino Acid SequenceMolecular BiologyFecesPhylogenyCaliciviridae InfectionsSwine DiseasesBase SequenceGenetic heterogeneityvirus diseasesOutbreakGenetic VariationSapovirusGeneral Medicinemedicine.diseasebiology.organism_classificationVirologyGastroenteritisNorovirusCaliciviridaeSequence Alignment
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Distribution of VP7 serotypes and VP4 genotypes among rotavirus strains recovered from Italian children with diarrhea

1997

108 rotavirus strains obtained from children with diarrhea hospitalized in Palermo, Italy, in the years 1990-1994, were examined by seminested PCR to study the relative frequency and distribution of the four most common alleles of the gene 4. Such strains were selected from 344 human rotavirus strains recovered in palermo during those years after characterization by electropherotyping, subgrouping and G serotyping. One hundred and seven of the 108 strains could be classified into P types, the P[8], G1 (38.3%) and the P[8], G4 (52.3%) types being predominant. The unique strain whose P genotype could not be identified showed an unusual combination of long migration electrophoretic pattern and…

DiarrheaSerotypemedicine.medical_specialtyGenotypeReoviridaeBiologymedicine.disease_causePolymerase Chain ReactionRotavirus Infectionslaw.inventionCapsidMedical microbiologylawVirologyRotavirusGenotypemedicineHumansUNIQUE VP4SerotypingChildAntigens ViralPolymerase chain reactionMolecular epidemiologyGeneral MedicinePOLYMERASE CHAIN-REACTIONbiology.organism_classificationVirologyGastroenteritisDiarrhearotavirusItalyChild PreschoolRNA ViralCapsid Proteinsmedicine.symptomArchives of Virology
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Detection of enteric adenoviruses 40 and 41 in stool specimens by monoclonal antibody-based enzyme immunoassays

1996

To examine the role of enteric adenoviruses (Ad40 and Ad41) in children with acute gastroenteritis, we evaluated 273 children with diarrhoea and 137 without enteric symptoms in Palermo, Italy, during an 8-month period. Stools were tested by two home-made monoclonal-based ELISAs to detected genus-specific adenovirus antigen and to type Ad40 and Ad41. Twenty-five samples (6.1%) were found to contain adenovirus, 18 of which were grown in Graham 293 and in HEp-2 cells. Ad40 and Ad41 were detected in 2.6% of children with diarrhoea and in none in the control group, while non-enteric adenoviruses were obtained from both patients (3.2%) and controls (6.5%). Samples containing Ad40 and Ad41 were po…

Diarrheamedicine.drug_classImmunologyEnzyme-Linked Immunosorbent AssayMonoclonal antibodymedicine.disease_causeVirusCell LineAdenovirus Infections HumanFecesAgglutination TestsVirologyPrevalencemedicineHumansTypingChildbiologybusiness.industryAdenoviruses HumanAntibodies Monoclonalbiology.organism_classificationVirologyGastroenteritisLatex fixation testAdenoviridaeMastadenovirusDiarrheaItalyEvaluation Studies as TopicMonoclonalmedicine.symptombusinessResearch in Virology
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Sequential variation in genomic RNA patterns of human rotaviruses isolated from infantile gastroenteritis

1986

The incidence and RNA electrophoretypes of rotaviral isolates obtained from infants and young children with acute gastroenteritis were studied from October, 1985 through April, 1986. Analysis of the viral RNA was carried out by Polyacrylamide gel electrophoresis followed by silver staining. Fourteen electrophoretypes were identified. A single dominant electrophoretype was found during the first months of the rotavirus seasonal outbreak. In contrast, a large variety of RNA patterns were observed during the latter portion of the study period. Subgrouping of rotavirus isolates by a double-sandwich enzyme-linked immunosorbent assay using monoclonal-detecting antibodies showed that all strains b…

Gel electrophoresisMolecular epidemiologyOutbreakRNAReoviridaeGeneral MedicineBiologyEnfant Epidémiologie moléculaire Electrophorétypes Profils de l’ARN génomique Variation séquentiellemedicine.disease_causebiology.organism_classificationVirologyArticleVirusMicrobiologyMolecular epidemiology Genomic RNA patterns Sequential variation Electrophoretypes ChildrenSilver stainRotavirus Gastroentérite ARNRotavirus RNA GastroenteritisRotavirusmedicineAnnales de l'Institut Pasteur / Virologie
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Identification of sapovirus infection among Japanese infants in a day care center.

2005

A total of 921 fecal specimens collected from 44 infants in a day care center in Tokyo, Japan during June 1999 to July 2000 were tested for the presence of sapovirus by reverse transcription-polymerase chain reaction (RT-PCR). Of 88 fecal specimens from infants with acute gastroenteritis, 2.3% (2) were found to be positive for sapovirus. Twenty-two of 833 (2.6%) fecal specimens collected from asymptomatic infants were also infected with this virus. Another interesting feature was the demonstration of high incidence of sapovirus infection (95.5%, 21 of 22) identified in a single day care center, which was not due to viral shedding after the latest acute gastroenteritis. Sapovirus was subject…

GenotypeAsymptomaticVirusSapovirusFecesJapanVirologyGenotypeMedicineHumansViral sheddingPathogenFecesPhylogenyCaliciviridae Infectionsbiologybusiness.industryReverse Transcriptase Polymerase Chain ReactionAge FactorsInfant NewbornOutbreakGenetic VariationInfantSapovirusChild Day Care Centersbiology.organism_classificationVirologyGastroenteritisInfectious DiseasesAcute DiseaseDiarrhea InfantileSeasonsmedicine.symptombusinessJournal of medical virology
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Real-world impact of rotavirus vaccination in European healthcare settings: a systematic literature review

2022

INTRODUCTION: Rotavirus is one of the most common pathogens causing diarrhea in children <5 years and has a major impact on childhood morbidity and mortality. Since the implementation of rotavirus vaccines into childhood immunization programs across Europe, there has been a reduction in rotavirus burden, including hospitalizations, outpatient cases, costs, and deaths. AREAS COVERED: A systematic literature review identified publications describing the clinical and economic impact of rotavirus vaccinations across Europe, from their introduction in 2006 to the end of 2020. A total of 3,137 articles were identified, of which 46 were included in the review. Included articles reported the impact…

ImmunologydiarrheaRotavirus InfectionsDrug DiscoveryHumansChildren; diarrhea; gastroenteritis; rotavirus; systematic literature review; vaccinesChildChildrenAgedPharmacologySettore MED/38 - Pediatria Generale e Specialisticarotaviruvaccines.Immunization ProgramsVaccinationRotavirus Vaccinessystematic literature reviewInfantvaccinesHospitalizationrotavirusMolecular MedicinegastroenteritiDelivery of Health Caregastroenteritis
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Norovirus in captive lion cub (Panthera leo)

2007

African lions (Panthera leo) are susceptible to viral diseases of domestic carnivores, including feline calici-virus infection. We report the identification of a novel enteric calicivirus, genetically related to human noroviruses of genogroup IV, in a lion cub that died of severe hemorrhagic enteritis.

LionsMicrobiology (medical)GenotypeEpidemiologyanimal diseasesvirusesMolecular Sequence Datalcsh:MedicineDNA FragmentationPanthera leomedicine.disease_causelcsh:Infectious and parasitic diseasesEnteritisFatal Outcomefluids and secretionsSpecies Specificitybiology.animalmedicineAnimalslcsh:RC109-216Amino Acid SequenceFeline calicivirus infectionenteritisPhylogenyCaliciviridae Infectionsbiologylcsh:RNorovirusZoonosisDispatchCaliciviruscalicivirusvirus diseaseszoonosismedicine.diseaseVirologydigestive system diseasesGastroenteritisInfectious DiseasesCaliciviridae InfectionsHemorrhagic enteritisAnimals NewbornDNA ViralNorovirusAnimals ZooPantheraAfrican lion
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Identification of Cpgp40/15 Type Ib as the Predominant Allele in Isolates of Cryptosporidium spp. from a Waterborne Outbreak of Gastroenteritis in So…

2006

ABSTRACT Cryptosporidium sp. isolates from a waterborne outbreak of diarrhea in France were analyzed by PCR-restriction fragment length polymorphism analysis and sequencing of the Cpgp40/15 locus. Ninety-one percent of the isolates were Cryptosporidium hominis type Ib. The results of this study and those of studies of other outbreaks suggest that the type Ib allele is the predominant allele associated with waterborne cryptosporidiosis.

MESH : France/epidemiologyEpidemiologyMESH : polymerase chain reactionMESH : molecular sequence dataProtozoan ProteinsCryptosporidiosisPolymerase Chain Reactionlaw.inventionDisease OutbreaksMESH : Cryptosporidium/geneticsMESH : water/parasitologylaw[ SDV.MP ] Life Sciences [q-bio]/Microbiology and ParasitologyMESH : gastroenteritis/parasitologyMESH : Polymorphism restriction fragment lengthwaterborne outbreakPolymerase chain reactionbiologyMESH : DNA Protozoan/analysisCryptosporidiumGastroenteritisDiarrheaMESH : Cryptosporidiosis/epidemiologyFrancemedicine.symptomMESH : Cryptosporidium/classificationCryptosporidium hominisMESH : Protozoan proteins/metabolismPolymorphism Restriction Fragment LengthMicrobiology (medical)MESH : Cryptosporidium/isolation&purificationMolecular Sequence DataCryptosporidiumLocus (genetics)MESH : Disease outbreaksMicrobiologyMESH : Cryptosporidiosis/parasitologymedicineAnimalsAlleleGenotyping[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyAllelesMESH : animalsMESH : sequence analysis DNAOutbreakWaterSequence Analysis DNADNA Protozoanbiology.organism_classificationMESH : protozoan proteins/geneticsVirologygenotypingMESH : Gastroenteritis/epidemiologyMESH : Alleles
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Performance analysis of two immunochromatographic assays for the diagnosis of rotavirus infection

2017

Group A rotaviruses (RVAs) are the primary cause of acute gastroenteritis (AGE) in young children worldwide. Several commercial tests including latex agglutination, enzyme-linked assays (ELISA) and immunochromatographic tests (ICT) have been developed for the diagnosis of RVA infection. In the present study, the performance of two commercially available one-step chromatographic immunoassays, CerTest Rotavirus + Adenovirus (Biotec S.L, Zaragoza, Spain) and Vikia Rota-Adeno (bioMerieux SA, Lyon, France) were retrospectively evaluated using Real-time PCR as reference test. Re-testing by Real-time PCR of 2096 stool samples of children hospitalized with AGE previously screened by ICTs (1467 by C…

Male0301 basic medicineSettore MED/07 - Microbiologia E Microbiologia Clinica030106 microbiologymedicine.disease_causeSensitivity and SpecificityChromatography AffinityRotavirus InfectionsAstrovirusSentitivity03 medical and health sciencesPredictive Value of TestsVirologyRotavirusGenotypemedicineHumansImmunochromatographic AssaysDiagnostic ErrorsRetrospective Studiesbiologybusiness.industryInfant NewbornInfantRotavirubiology.organism_classificationVirologyGastroenteritisLatex fixation testRotavirus infectionItalyChild PreschoolSpecificityNorovirusFemaleImmunochromatographybusinessViral loadJournal of Virological Methods
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Waterborne Norovirus outbreak at a seaside resort likely originating from municipal water distribution system failure

2018

AbstractIn May 2016 a Norovirus (NoV) gastroenteritis outbreak involved a high school class visiting a seaside resort near Taormina (Mascali, Sicily). Twenty-four students and a teacher were affected and 17 of them showed symptoms on the second day of the journey, while the others got ill within the following 2 days. Symptoms included vomiting, diarrhoea and fever, and 12 students required hospitalisation. Stool samples tested positive for NoV genome by Real-Time polymerase chain reaction assay in all 25 symptomatic subjects. The GII.P2/GII.2 NoV genotype was linked to the outbreak by ORF1/ORF2 sequence analysis. The epidemiological features of the outbreak were consistent with food/waterbo…

Male0301 basic medicineSettore MED/07 - Microbiologia E Microbiologia ClinicaVeterinary medicinemedicine.medical_specialtywaterborneAdolescentEpidemiology030106 microbiologySewagemedicine.disease_causeDisease Outbreaks03 medical and health sciences0302 clinical medicineTap waterWaterborne DiseasesGenotypeEpidemiologymedicineHumans030212 general & internal medicineSicilyFecesCaliciviridae InfectionsNoroviruOriginal Paperbusiness.industryDrinking WaterNorovirusOutbreakWaterborne diseasesmedicine.diseaseGastroenteritisInfectious DiseasesGeographyNorovirusFemalegenotype GII.P2/GII.2businessgastroenteritis outbreakEpidemiology and Infection
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