Search results for "git"

Open data and digital morphology

2017

International audience; Over the past two decades, the development of methods for visualizing and analysing specimens digitally, in three and even four dimensions, has transformed the study of living and fossil organisms. However, the initial promise that the widespread application of such methods would facilitate access to the underlying digital data has not been fully achieved. The underlying datasets for many published studies are not readily or freely available, introducing a barrier to verification and reproducibility, and the reuse of data. There is no current agreement or policy on the amount and type of data that should be made available alongside studies that use, and in some cases…

2017

Both effective population size and life history may influence the efficacy of purifying selection, but it remains unclear if the environment affects the accumulation of weakly deleterious nonsynonymous polymorphisms. We hypothesize that the reduced energetic cost of osmoregulation in brackish water habitat may cause relaxation of selective constraints at mitochondrial oxidative phosphorylation (OXPHOS) genes. To test this hypothesis, we analyzed 57 complete mitochondrial genomes of Pungitius pungitius collected from brackish and freshwater habitats. Based on inter- and intraspecific comparisons, we estimated that 84% and 68% of the nonsynonymous polymorphisms in the freshwater and brackish …

Cannibalism facilitates gigantism in a nine-spined stickleback (Pungitius pungitius) population

2016

Cannibalism is a taxonomically widespread phenomenon that can fundamentally affect the structure and stability of aquatic communities, including the emergence of a bimodal size distribution (“dwarfs” and “giants”) in fish populations. Emergence of giants could also be driven or facilitated by parasites that divert host resources from reproduction to growth. We studied the trophic ecology of giant nine-spined sticklebacks (Pungitius pungitius) in a Finnish pond to evaluate the hypotheses that gigantism in this population would be facilitated by cannibalism and/or parasitic infections by Schistocephalus pungitii cestode. Stomach content analyses revealed an initial ontogenetic dietary shift f…

Visible implant elastomer (VIE) success in early larval stages of a tropical amphibian species

2020

AbstractAnimals are often difficult to distinguish at an individual level, but being able to identify individuals can be crucial in ecological or behavioral studies. In response to this challenge, biologists have developed a range of marking (tattoos, brands, toe-clips) and tagging (PIT, VIA, VIE) methods to identify individuals and cohorts. Animals with complex life cycles are notoriously hard to mark because of the distortion or loss of the tag across metamorphosis. In frogs, few studies have attempted larval tagging and none have been conducted on a tropical species. Here, we present the first successful account of VIE tagging in early larval stages (Gosner stage 25) of the dyeing poison…

Clutch-size variation in Western Palaearctic secondary hole-nesting passerine birds in relation to nest box design.

2014

Møller, A.P. [et al.]

Palaearctic species of Charipinae (Hymenoptera, Figitidae): two new species, synthesis and identification key

2018

The Charipinae Dalla Torre & Kieffer, 1910 present in the Palaearctic region are revised; 2410 specimens have been identified, belonging to 75 species: 52 to Alloxysta, one to Apocharips, six to Dilyta and 16 to Phaenoglyphis. For 33 species, new country-level distribution records are provided. Two new species are here described: Alloxysta palearctica Ferrer-Suay & Pujade-Villar sp. nov. and Alloxysta pascuali Ferrer-Suay sp. nov. A diagnosis for these species is included and their diagnostic features are shown in different figures. A key to identify all the species of Charipinae in the Palaearctic region is also given.

Charipinae (Hymenoptera: Cynipoidea: Figitidae) present in the Museum of Natural History of the University of Wroclaw, with an identification key for…

2020

Charipinae (Cynipoidea: Figitidae) deposited in the Museum of Natural History of Wroclaw University (Poland) have been studied. Seven species are recorded for the first time from Poland: Alloxysta brachyptera (Hartig, 1840), A. castanea (Hartig, 1841), A. citripes (Thomson, 1862), A. consobrina (Zetterstedt, 1838), A. mullensis (Cameron, 1883), A. nottoni Ferrer-Suay & Pujade-Villar, 2015 and Phaenoglyphis heterocera (Hartig, 1841). The presence of previously recorded species is confirmed and new records are specified. A key to all Charipinae species ever recorded in Poland is given.

New Charipinae ( Hymenoptera : Cynipoidea : Figitidae ) records from China

2016

Abstract Charipinae material collected from different provinces of China has been studied. Twenty-one previously described species have been identified: Alloxysta arcuata, A. brevis , A. carinata , A. castanea , A. consobrina , A. fracticornis , A. leunisii , A. macrophadna , A. mullensis , A. obscurata , A. paretasmartinezi , A. pilipennis , A. pilosa , A. postica , A. sawoniewiczi , A. victrix , A. xanthopa , Dilyta subclavata , Phaenoglyphis chinensis , P. heterocera and P. villosa . All species, except for P. chinensis and P. villosa , are here recorded for the first time from China. Diagnosis, material studied and distribution are given for each species. Plates with the diagnostic morp…

Protist predation can select for bacteria with lowered susceptibility to infection by lytic phages

2015

Background: Consumer-resource interactions constitute one of the most common types of interspecific antagonistic interaction. In natural communities, complex species interactions are likely to affect the outcomes of reciprocal co-evolution between consumers and their resource species. Individuals face multiple enemies simultaneously, and consequently they need to adapt to several different types of enemy pressures. In this study, we assessed how protist predation affects the susceptibility of bacterial populations to infection by viral parasites, and whether there is an associated cost of defence on the competitive ability of the bacteria. As a study system we used Serratia marcescens and i…

Assessing the added value of the recent declaration on unregulated fishing for sustainable governance of the central Arctic Ocean

2016

Accepted manuscript version. Published version available at https://doi.org/10.1016/j.marpol.2016.01.013. Accepted manuscript version, licensed CC BY-NC-ND 4.0. The ‘Declaration concerning the prevention of unregulated high seas fishing in the central Arctic Ocean’ signed by the Arctic 5 nations, limits unregulated high seas fishing in the central part of the Arctic Ocean, and holds potential social, economic and political impacts for numerous stakeholders. In this paper, the four Interim Measures in the Declaration are discussed and what value these measures bring beyond the existing international agreements is explored. It is found that even though the Declaration fills a gap in the manag…