Search results for "hemocyanin"

showing 10 items of 148 documents

Allosteric Models for Multimeric Proteins:  Oxygen-Linked Effector Binding in Hemocyanin

2005

In many crustaceans, changing concentrations of several low molecular weight compounds modulates hemocyanin oxygen binding, resulting in lower or higher oxygen affinities of the pigment. The nonphysiological effector caffeine and the physiological modulator urate, the latter accumulating in the hemolymph of the lobster Homarus vulgaris during hypoxia, increase hemocyanin oxygen affinity and decrease cooperativity of oxygen binding. To derive a model that describes the mechanism of allosteric interaction between hemocyanin and oxygen in the presence of urate or caffeine, studies of oxygen, urate, and caffeine binding to hemocyanin were performed. Exposure of lobster hemocyanin to various pH …

Protein Conformationmedicine.medical_treatmentAllosteric regulationchemistry.chemical_elementCooperativityCalorimetryBiochemistryOxygenAllosteric RegulationCaffeineHemolymphmedicineAnimalsBinding siteHypoxiaBinding SitesIsothermal titration calorimetryHemocyaninNephropidaeUric AcidOxygenModels ChemicalBiochemistrychemistryHemocyaninsOxygen bindingProtein BindingBiochemistry
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Small-angle X-ray scattering reveals differences between the quaternary structures of oxygenated and deoxygenated tarantula hemocyanin

1996

Small-angle X-ray scattering (SAXS) curves have been recorded for the oxygenated and deoxygenated states of the 4 x 6-meric hemocyanin from the tarantula Eurypelma californicum. A comparison of the curves shows that the quaternary structures of the two states are different by three criteria, which all indicate that the hemocyanin is less compact in the oxygenated compared to the deoxygenated form: (a) The radius of gyration is 8.65 +/- 0.05 nm for the deoxy- and 8.80 +/- 0.05 nm for the oxy-form. (b) The maximum particle dimension amounts to 25.0 +/- 0.5 nm for the deoxy- and to 27.0 +/- 0.5 nm for the oxy-form. (c) A dip in the intramolecular distance distribution function p(r) is more pro…

Protein Conformationmedicine.medical_treatmentBiophysicsElectronBiochemistrylaw.inventionX-Ray DiffractionStructural BiologylawGeneticsmedicineAnimalsMolecular BiologyChemistrySmall-angle X-ray scatteringScatteringSpidersHemocyaninCell BiologyModels StructuralMicroscopy ElectronCrystallographyIntramolecular forceHemocyaninsRadius of gyrationProtein quaternary structureElectron microscopeOxidation-ReductionFEBS Letters
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Structural properties, conformational stability and oxygen binding properties of Penaeus monodon hemocyanin

2004

Hemocyanin sequences allineament shows the presence of highly invariant regions especially in the active site and in the tight intersubunits interaction sites. Comparing the aminoacids in contact regions between monomers is possible to interpret the stability of hexamers.

Protein Conformationmedicine.medical_treatmentGeneral Physics and AstronomyBiologyPenaeus monodon03 medical and health scienceschemistry.chemical_compound0302 clinical medicinePenaeidaeStructural BiologymedicineAnimalsGeneral Materials Science030304 developmental biology0303 health sciencesEcologyActive siteHemocyaninCell Biologybiology.organism_classificationOxygenMonomerchemistryHemocyaninsBiophysicsbiology.proteinProtein quaternary structureConformational stability030217 neurology & neurosurgeryOxygen binding
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Conversion of crustacean hemocyanin to catecholoxidase

2004

Crustacean hemocyanin as oxygen carrier and catecholoxidase as enzymes belong to the same protein family (type 3 copper proteins) sharing very similar active sites. Treatment with SDS of these hemocyanins results in an opening of the entrance to the active site for bulky phenolic compounds. This demonstrates, that almost all hemocyanin subunits possess the ability of catecholoxidase activity.

Protein familyCopper proteinTyrosinasemedicine.medical_treatmentGeneral Physics and Astronomychemistry.chemical_elementchemical and pharmacologic phenomenacomplex mixturesOxygenStructural BiologyCrustaceamedicineAnimalsGeneral Materials ScienceCatechol oxidasechemistry.chemical_classificationbiologyActive sitehemic and immune systemsHemocyaninCell BiologyEnzymechemistryBiochemistryHemocyaninsbiology.proteinCatechol OxidaseMicron
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Red blood with blue-blood ancestry: Intriguing structure of a snail hemoglobin

2006

The phylogenetic enigma of snail hemoglobin, its isolated occurrence in a single gastropod family, the Planorbidae, and the lack of sequence data, stimulated the present study. We present here the complete cDNA and predicted amino acid sequence of two hemoglobin polypeptides from the planorbid Biomphalaria glabrata (intermediate host snail for the human parasite Schistosoma mansoni ). Both isoforms contain 13 different, cysteine-free globin domains, plus a small N-terminal nonglobin “plug” domain with three cysteines for subunit dimerization (total M r ≈ 238 kDa). We also identified the native hemoglobin molecule and present here a preliminary 3D reconstruction from electron microscopical …

Protein subunitmedicine.medical_treatmentMolecular Sequence DataBiologyEvolution MolecularHemoglobinschemistry.chemical_compoundImaging Three-DimensionalHemolymphHemolymphImage Processing Computer-AssistedmedicineAnimalsProtein IsoformsBiomphalaria glabrataAmino Acid SequenceGlobinPhylogenyMultidisciplinaryBiomphalariaSequence Homology Amino AcidHemocyaninBiological Sciencesbiology.organism_classificationMolecular biologyProtein Structure TertiaryRespiratory proteinMyoglobinchemistryHemoglobinProceedings of the National Academy of Sciences
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Molecular cloning and evolution of lobster hemocyanin.

2001

In the American lobster, Homarus americanus, oxygen is transported by a hemocyanin that is composed 2 x 6 subunits. N-terminal sequencing show the presence of three distinct subunit types (alpha, beta and gamma). We cloned the cDNA of one of these subunits that belong to the alpha-type. It encodes a hemocyanin subunit of 654 amino acids with a molecular mass of 84.8 kDa, which is synthesized in the hepatopancreas. Phylogenetic analyses of the crustacean hemocyanin sequences show two well-separated clades, which correspond to the alpha and gamma-type subunits. Sequences of beta-type subunits are still unknown. The gamma-sequences have evolved about 15% faster than the alpha-subunits, consist…

Protein subunitmedicine.medical_treatmentMolecular Sequence DataBiophysicsMolecular cloningBiochemistryEvolution MolecularComplementary DNAmedicineAnimalsTissue DistributionAmino Acid SequenceRNA MessengerCloning MolecularMolecular clockMolecular BiologyPhylogenyHomarusMolecular massbiologySequence Homology Amino AcidHemocyaninCell BiologyAmerican lobsterbiology.organism_classificationMolecular biologyNephropidaeProtein SubunitsHemocyaninsBiochemical and biophysical research communications
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Bohr-effect and buffering capacity of hemocyanin from the tarantula E. californicum.

2003

A previous report showed that binding of oxygen to the 24-meric hemocyanin from E. californicum does not correlate linearly with the release of protons as known from hemoglobin. However, this unusual complex phenomenological observation could not be explained at that time. Here, I present a full analysis of the thermodynamic coupling between protons and oxygen for the 24-meric tarantula hemocyanin in Ringer-solution based on the Nested-MWC-model. A strategy is presented which allows to reduce the number of free parameters when fitting the model to the data by including explicitly the equilibrium constants for binding of protons to the different conformations. The results show that the Neste…

Proton bindingProtonmedicine.medical_treatmentAllosteric regulationBiophysicsBohr effectBuffersBiochemistryProton transportmedicineAnimalsEquilibrium constantChemistryOrganic ChemistryHemocyaninSpidersHydrogen-Ion ConcentrationModels TheoreticalRinger's SolutionOxygenCrystallographyOxyhemoglobinsHemocyaninsProton affinityThermodynamicsIsotonic SolutionsProtonsProtein BindingBiophysical chemistry
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Toward oxygen binding curves of single respiratory proteins

2004

Oxygen binding curves of single molecules promise to discriminate between different models describing cooperativity because load distributions are accessible. Individual tarantula hemocyanins could be detected by fluorescence correlation spectroscopy using intrinsic tryptophan fluorescence as sensor of bound oxygen. However, imaging of immobilized proteins was not possible due to fast photo-bleaching. It is shown that tetra-methyl-carboxy-rhodamine (TAMRA), commonly used as a fluorescence label in single-molecule spectroscopy, can also be applied to monitor bound oxygen. The dye's fluorescence is quenched due to Förster energy transfer to the oxygenated active sites of hemocyanin.

Rhodaminesmedicine.medical_treatmentAnalytical chemistryGeneral Physics and Astronomychemistry.chemical_elementSpidersHemocyaninFluorescence correlation spectroscopyCooperativityCell BiologyFluorescenceOxygenOxygenchemistryStructural BiologyHemocyaninsmedicineBiophysicsAnimalsMoleculeGeneral Materials ScienceSpectroscopyOxygen bindingFluorescent DyesMicron
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Diplopod hemocyanin sequence and the phylogenetic position of the Myriapoda

2001

Hemocyanins are copper-containing respiratory proteins of the Arthropoda that have so far been thoroughly investigated only in the Chelicerata and the Crustacea but have remained unstudied until now in the Myriapoda. Here we report the first sequence of a myriapod hemocyanin. The hemocyanin of Spirostreptus sp. (Diplopoda: Spirostreptidae) is composed of two distinct subunits that are arranged in a 6 x 6 native molecule. The cloned hemocyanin subunit cDNA codes of for a polypeptide of 653 amino acids (75.5 kDa) that includes a signal peptide of 18 amino acids. The sequence closely resembles that of the chelicerate hemocyanins. Molecular phylogenetic analyses reject with high statistical con…

Signal peptideDNA Complementarymedicine.medical_treatmentMolecular Sequence DataMyriapodachemical and pharmacologic phenomenaBiologycomplex mixturesEvolution MolecularSequence Analysis ProteinGeneticsmedicineAnimalsAmino Acid SequenceCloning MolecularMolecular BiologyArthropodsEcology Evolution Behavior and SystematicsPhylogenyPhylogenetic treeSequence Homology Amino Acidhemic and immune systemsHemocyaninAnatomySequence Analysis DNAbiology.organism_classificationSpirostreptusSister groupEvolutionary biologyHemocyaninsChelicerataSequence AlignmentSpirostreptidae
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Subunit sequences of the 4 x 6-mer hemocyanin from the golden orb-web spider, Nephila inaurata. Intramolecular evolution of the chelicerate hemocyani…

2003

The transport of oxygen in the hemolymph of many arthropod and mollusc species is mediated by large copper-proteins that are referred to as hemocyanins. Arthropod hemocyanins are composed of hexamers and oligomers of hexamers. Arachnid hemocyanins usually form 4 x 6-mers consisting of seven distinct subunit types (termed a-g), although in some spider taxa deviations from this standard scheme have been observed. Applying immunological and electrophoretic methods, six distinct hemocyanin subunits were identified in the red-legged golden orb-web spider Nephila inaurata madagascariensis (Araneae: Tetragnathidae). The complete cDNA sequences of six subunits were obtained that corresponded to a-,…

SpiderMultiple sequence alignmentNephila inauratabiologyProtein subunitmedicine.medical_treatmentchemical and pharmacologic phenomenaHemocyaninAnatomybiology.organism_classificationcomplex mixturesBiochemistryEvolutionary biologyHemolymphmedicineChelicerataArthropodEuropean Journal of Biochemistry
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