Search results for "hemocyanin"

showing 10 items of 148 documents

Structure of a molluscan hemocyanin didecamer (HtH1 from Haliotis tuberculata) at 12 Å resolution by cryoelectron microscopy

2000

A 12 A resolution three-dimensional density map of the Haliotis tuberculata hemocyanin type 1 (HtH1) didecamer has been obtained by cryoelectron microscopy of unstained molecules and angular reconstitution. The dyad symmetry of the 8 MDa D5 HtH1 didecamer, formed by the pairing of two asymmetric 4 MDa ring-like C5 decamers, is emphasised. The major and minor surface helical grooves of the didecamer are well defined, in agreement with earlier data on molluscan hemocyanins. The location of the obliquely orientated repeating unit, a subunit dimer, within the decamer has been defined. Following interactive extraction of this dimer, several new structural features of the dimer and of the subunit…

Models MolecularSteric effectsDimermedicine.medical_treatmentProtein subunitCryoelectron MicroscopyHemocyaninBiologyCleavage (embryo)chemistry.chemical_compoundCrystallographychemistryMolluscaStructural BiologyHemocyaninsMicroscopyImage Processing Computer-AssistedmedicineAnimalsMoleculeProtein Structure QuaternaryDimerizationMolecular BiologyDyad symmetryJournal of Molecular Biology
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Comparative 11A structure of two molluscan hemocyanins from 3D cryo-electron microscopy

2006

Abstract Hemocyanins are giant extracellular proteins that transport oxygen in the hemolymph of many molluscs. Molluscan hemocyanins are cylindrical decamers or didecamers of a 350–400 kDa subunit that contains seven or eight different covalently linked globular functional units (FUs), arranged in a linear manner. Each FU carries a single copper active site and reversibly binds one dioxygen molecule. As a consequence, the decamer can carry up to 70 or 80 O 2 molecules. Although complete sequence information is now available from several molluscan hemocyanins, many details of the quaternary structure are still unclear, including the topology of the 10 subunits within the decamer. Here we sho…

Models MolecularTransport oxygenCryo-electron microscopyMacromolecular Substancesmedicine.medical_treatmentProtein subunitGeneral Physics and AstronomyHemocyaninStructural BiologyHemolymphmedicineImage Processing Computer-AssistedAnimalsGeneral Materials ScienceProtein Structure QuaternarybiologyResolution (electron density)Cryoelectron MicroscopyActive siteHemocyaninCell BiologyCrystallographyMolluscaHemocyaninsbiology.proteinProtein quaternary structure
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Structure, diversity and evolution of myriapod hemocyanins

2014

Oxygen transport in the hemolymph of many arthropods is mediated by hemocyanins, large copper-containing proteins that are well-studied in Chelicerata and Crustacea, but had long been considered unnecessary in the subphylum of Myriapoda. Only recently has it become evident that hemocyanins are present in Scutigeromorpha (Chilopoda) and Spirostreptida (Diplopoda). Here we present evidence for a more widespread occurrence of hemocyanin in the myriapods. By means of RT-PCR, western blotting and database searches, hemocyanins were identified in the symphylans Hanseniella audax and Symphylella vulgaris, the chilopod Scolopendra subspinipes dehaani and the diplopod Polydesmus angustus. No hemocya…

Models Molecularbiologymedicine.medical_treatmentMolecular Sequence DataOxygen transportMyriapodaHemocyaninCell Biologybiology.organism_classificationBiochemistryEvolution MolecularPaleontologySpirostreptidaEvolutionary biologyHemocyaninsHemolymphmedicineAnimalsChelicerataAmino Acid SequenceArthropodArthropodsMolecular BiologyScutigera coleoptrataFEBS Journal
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The refined structure of functional unit h of keyhole limpet hemocyanin (KLH1-h) reveals disulfide bridges

2011

Hemocyanins are multimeric oxygen-transport proteins in the hemolymph of many arthropods and mollusks. The overall molecular architecture of arthropod and molluscan hemocyanin is very different, although they possess a similar binuclear type 3 copper center to bind oxygen in a side-on conformation. Gastropod hemocyanin is a 35 nm cylindrical didecamer (2 × 10-mer) based on a 400 kDa subunit. The latter is subdivided into eight paralogous “functional units” (FU-a to FU-h), each with an active site. FU-a to FU-f contribute to the cylinder wall, whereas FU-g and FU-h form the internal collar complex. Atomic structures of FU-e and FU-g, and a 9 A cryoEM structure of the 8 MDa didecamer are avai…

Models Molecularchemistry.chemical_classificationbiologyCopper proteinmedicine.medical_treatmentProtein subunitClinical BiochemistryActive siteHemocyaninCell BiologyBiochemistryAmino acidCrystallographychemistryHemocyaninsHemolymphGeneticsbiology.proteinmedicineDisulfidesMolecular BiologyKeyhole limpet hemocyaninOxygen bindingIUBMB Life
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Subunit organization of the abalone Haliotis tuberculata hemocyanin type 2 (HtH2), and the cDNA sequence encoding its functional units d, e, f, g and…

1999

We have developed a HPLC procedure to isolate the two different hemocyanin types (HtH1 and HtH2) of the European abalone Haliotis tuberculata. On the basis of limited proteolytic cleavage, two-dimensional immunoelectrophoresis, PAGE, N-terminal protein sequencing and cDNA sequencing, we have identified eight different 40-60-kDa functional units (FUs) in HtH2, termed HtH2-a to HtH2-h, and determined their linear arrangement within the elongated 400-kDa subunit. From a Haliotis cDNA library, we have isolated and sequenced a cDNA clone which encodes the five C-terminal FUs d, e, f, g and h of HtH2. As shown by multiple sequence alignments, defg of HtH2 correspond structurally to defg from Octo…

Models Molecularfood.ingredientDNA ComplementarySequence analysismedicine.medical_treatmentMolecular Sequence DataOctopodiformesMegathura crenulataBiochemistryEvolution MolecularfoodSequence Analysis ProteinComplementary DNAmedicineAnimalsHaliotisAmino Acid SequenceCloning MolecularProtein Structure QuaternaryPeptide sequenceImmunoelectrophoresisbiologySequence Homology Amino AcidcDNA libraryHelix SnailsProtein primary structureHemocyaninAnatomySequence Analysis DNAbiology.organism_classificationPeptide FragmentsBiochemistryMolluscaHemocyaninsEuropean journal of biochemistry
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Complete Sequence of the 24-mer Hemocyanin of the TarantulaEurypelma californicum

2000

Hemocyanins are large oligomeric respiratory proteins found in many arthropods and molluscs. The hemocyanin of the tarantula Eurypelma californicum is a 24-mer protein complex with molecular mass of 1,726,459 Da that consists of seven different polypeptides (a–g), each occupying a distinct position within the native molecule. Here we report the complete molecular structure of the E. californicumhemocyanin as deduced from the corresponding cDNAs. This represents the first complex arthropod hemocyanin to be completely sequenced. The different subunits display 52–66% amino acid sequence identity. Within the subunits, the central domain, which bears the active center with the copper-binding sit…

Molecular massStereochemistryProtein subunitmedicine.medical_treatmentHemocyaninCell BiologyAnatomyBiologyRandom hexamerBiochemistryComplete sequencePhylogeneticsmedicineHomology modelingMolecular BiologyPeptide sequenceJournal of Biological Chemistry
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Minireview: Recent progress in hemocyanin research

2011

This review summarizes recent highlights of our joint work on the structure, evolution, and function of a family of highly complex proteins, the hemocyanins. They are blue-pigmented oxygen carriers, occurring freely dissolved in the hemolymph of many arthropods and molluscs. They are copper type-3 proteins and bind one dioxygen molecule between two copper atoms in a side-on coordination. They possess between 6 and 160 oxygen-binding sites, and some of them display the highest molecular cooperativity observed in nature. The functional properties of hemocyanins can be convincingly described by either the Monod-Wyman-Changeux (MWC) model or its hierarchical extension, the Nested MWC model; the…

Molecular modelEcologymedicine.medical_treatmentAllosteric regulationActive siteHemocyaninCooperativityPlant ScienceBiologyAffinitiesHemolymphbiology.proteinmedicineBiophysicsAnimal Science and ZoologyOxygen bindingIntegrative and Comparative Biology
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9 Å cryo-EM structure and molecular model of a gastropod hemocyanin didecamer (KLH1) reveals the architecture of the asymmetric collar

2008

Hemocyanins are blue copper proteins that transport oxygen in the hemolymph of many arthropods and molluscs. Molluscan hemocyanins are decamers, didecamers or multidecamers of a 350–400 kDa polypeptide subunit that is subdivided into seven or eight different functional units (FUs, each with a single copper active site). The quaternary structure is a semi-hollow cylinder consisting of a wall and a collar. Recently, we published a 9 A cryo-EM structure and molecular model of a cephalopod hemocyanin decamer (NpH, from Nautilus pompilius) that answered many hitherto unsolved questions concerning the quaternary structure of molluscan hemocyanin. Notably, it revealed the twisted pathway of the 10…

Molecular modelbiologyChemistryStereochemistryCopper proteinmedicine.medical_treatmentProtein subunitActive siteHemocyaninAnatomybiology.organism_classificationCephalopodHemolymphbiology.proteinmedicineProtein quaternary structure
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Respiratory proteins in Sipunculus nudus--implications for phylogeny and evolution of the hemerythrin family.

2009

Three major classes of respiratory proteins are known, hemoglobin, molluscan and arthropod hemocyanin, and hemerythrin (Hr). Similar to hemoglobin, respiratory Hr is packed into erythrocytes floating in the coelomic fluid and is only known from sipunculids, brachiopods, and priapulids. Owing to this scattered distribution, the presence of Hr is generally assumed to be the plesiomorphic condition without phylogenetic importance. By sequencing 2000 Expressed Sequence Tags (ESTs) from Sipunculus nudus, we found 75 Hr-coding ESTs assembled to 20 cDNA contigs classified as four distinct Hr isoforms: three polymeric Hrs (subunit A, A', and B) and the monomeric myo-hemerythrin (myoHr). Phylogeneti…

NematodaPhysiologymedicine.medical_treatmentBiochemistryHemerythrinEvolution MolecularPhylogeneticsSipunculus nudusmedicineAnimalsProtein IsoformsMolecular BiologyPhylogenySipunculaExpressed Sequence TagsExpressed sequence tagLikelihood FunctionsAnnelidPhylogenetic treebiologyRespirationHemocyaninBayes TheoremAnatomybiology.organism_classificationHemerythrinBiochemistryGene Expression RegulationMultigene FamilyComparative biochemistry and physiology. Part B, Biochemistrymolecular biology
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Topology of the 10 subunits within the decamer of KLH, the hemocyanin of the marine gastropod Megathura crenulata.

2002

Immunoelectron microscopy has been performed using negatively stained immune complexes of keyhole limpet hemocyanin isoform 1 (KLH1) decamers and a functional unit-specific monoclonal antibody anti-KLH1-c1. The antibody links hemocyanin molecules at both the collar and the collarless edge of the decamer, indicating a peripheral localization of functional units c. In isoform 2 (KLH2) the positions of functional units c have been identified with the peanut agglutinin (PNA), which has previously been shown to exclusively bind to KLH2-c. Ferritin linked to PNA was used to visualize labeled molecules electron microscopically. The pattern of labeling also indicates a peripheral localization of th…

Peanut agglutininGene isoformModels MolecularImmunoelectron microscopymedicine.medical_treatmentProtein subunitchemical and pharmacologic phenomenaHemocyaninBiologyMegathura crenulatabiology.organism_classificationCrystallography X-RayMolecular biologyNegative stainMolecular WeightMicroscopy ElectronProtein SubunitsStructural BiologyMolluscaHemocyaninsmedicinebiology.proteinAnimalsProtein Structure QuaternaryKeyhole limpet hemocyaninJournal of structural biology
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