Search results for "hydrophilic"

showing 10 items of 276 documents

High Submicellar Liquid Chromatography

2013

Surfactant addition above the critical micellar concentration (CMC), in reversed-phase liquid chromatography (RPLC), was proposed as a way to modify the selectivity and analysis time, giving rise to a chromatographic mode called micellar liquid chromatography (MLC). However, solutions containing only surfactant are too weak and yield poor peak shape. This was remediated by the addition of a small amount of organic solvent. To preserve the existence of micelles, in MLC high contents of organic solvent are avoided. Nevertheless, there is no reason to neglect the potentiality of mobile phases containing a surfactant above its CMC in water and a high organic solvent content (without micelles). …

Chromatographycolumn interactionsElutionChemistryHydrophilic interaction chromatographyAnalytical chemistryFiltration and Separationmacromolecular substancesReversed-phase chromatographyMicelleAnalytical Chemistryreversed-phase liquid chromatographyCountercurrent chromatographyPulmonary surfactantMicellar liquid chromatographyCritical micelle concentrationchromatographic performancesubmicellar liquid chromatographySeparation & Purification Reviews
researchProduct

Effects of succinylation on thermal induced amyloid formation in Concanavalin A.

2007

We have recently shown that upon slight thermal destabilization the legume lectin Concanavalin A may undergo two different aggregation processes, leading, respectively, to amyloid fibrils at high pH and amorphous aggregates at low pH. Here we present an experimental study on the amyloid aggregation of Succinyl Concanavalin A, which is a dimeric active variant of Concanavalin. The results show that, as for the native protein, the fibrillation process appears to be favoured by alkaline pH, far from the isoelectric point of the protein. Moreover, it strongly depends on temperature and requires large conformational changes both at secondary and tertiary structure level. With respect to the nati…

Circular dichroismAmyloidProtein DenaturationAmyloidbiologyChemistryCircular DichroismBiophysicsLegume lectinGeneral MedicineProtein aggregationHydrogen-Ion ConcentrationProtein tertiary structureProtein Structure SecondaryProtein Structure Tertiaryprotein aggregationSuccinylationIsoelectric pointBiochemistryConcanavalin Abiology.proteinConcanavalin AThermodynamicsDimerizationHydrophobic and Hydrophilic Interactions
researchProduct

Carnosine Inhibits Aβ42Aggregation by Perturbing the H-Bond Network in and around the Central Hydrophobic Cluster

2013

Aggregation of the amyloid-β peptide (Aβ) into fibrillar structures is a hallmark of Alzheimer's disease. Thus, preventing self-assembly of the Aβ peptide is an attractive therapeutic strategy. Here, we used experimental techniques and atomistic simulations to investigate the influence of carnosine, a dipeptide naturally occurring in the brain, on Aβ aggregation. Scanning force microscopy, circular dichroism and thioflavin T fluorescence experiments showed that carnosine does not modify the conformational features of Aβ42 but nonetheless inhibits amyloid growth. Molecular dynamics (MD) simulations indicated that carnosine interacts transiently with monomeric Aβ42 by salt bridges with charge…

Circular dichroismMagnetic Resonance Spectroscopy1303 BiochemistryStereochemistryStatic ElectricityCarnosinePeptideMolecular Dynamics SimulationBiochemistryproteinprotein interactionsProtein–protein interactionchemistry.chemical_compoundMolecular dynamicsnutraceutical compounds10019 Department of Biochemistry1312 Molecular BiologyMolecular Biologychemistry.chemical_classificationAmyloid beta-PeptidesDipeptideHydrogen bondOrganic ChemistryIntermolecular forceTemperatureneuroprotective agentHydrogen BondingAlzheimer's diseasePeptide Fragmentsmolecular dynamicscarnosinechemistry1313 Molecular Medicine570 Life sciences; biologyMolecular MedicineHydrophobic and Hydrophilic Interactionsprotein aggregation fibrillogenesis carnosine AFM1605 Organic ChemistryChemBioChem
researchProduct

Cytotoxic hydrophilic iminophosphorane coordination compounds of d8 metals. Studies of their interactions with DNA and HSA

2012

The synthesis and characterization of a new water-soluble N,N-chelating iminophosphorane ligand TPAN-C(O)-2-NC(5)H(4) (N,N-IM) (1) and its d(8) (Au(III), Pd(II) and Pt(II)) coordination complexes are reported. The structures of cationic [AuCl(2)(N,N-IM)]ClO(4) (2) and neutral [MCl(2)(N,N-IM)] M=Pd (3), Pt(4) complexes were determined by X-ray diffraction studies or by means of density-functional calculations. While the Pd and Pt compounds are stable in mixtures of DMSO/H(2)O over 4 days, the gold derivative (2) decomposes quickly to TPAO and previously reported neutral gold(III) compound [AuCl(2)(N,N-H)] 5 (containing the chelating N,N-fragment HN-C(O)-2-NC(5)H(4)). The cytotoxicities of co…

Circular dichroismMagnetic Resonance SpectroscopyStereochemistryPhosphoranesAntineoplastic AgentsBiochemistryMedicinal chemistryArticleCoordination complexInorganic ChemistryX-Ray DiffractionCell Line TumorSpectroscopy Fourier Transform InfraredmedicineHumansChelationSerum Albuminchemistry.chemical_classificationCisplatinLigandCircular DichroismIsothermal titration calorimetryDNANuclear magnetic resonance spectroscopyHuman serum albuminSpectrometry FluorescencechemistryMetalsCisplatinHydrophobic and Hydrophilic Interactionsmedicine.drugJournal of Inorganic Biochemistry
researchProduct

Electrokinetic capillary chromatography in a polar continuous‐phase water‐in‐oil microemulsion constituted by water, sodium dodecyl sulfate, and n ‐p…

2005

A water-in-oil (w/o) microemulsion (ME) constituted by 15% Tris buffer, pH 8.4, in water and 85% sodium dodecyl sulfate (SDS)/n-pentanol 1:4 mixture, capable of dissolving up to 30% vegetable oils and lard, was used as background electrolyte in reverse microemulsion electrokinetic capillary chromatography (RMEEKC). Owing to the free SDS ions in the continuous phase and some degree of percolation, the ME showed a high conductivity (0.65 mS. cm(-1) at 25 degrees C) and sustained a very stable capillary current. Previous rinsing of the capillary with a quaternary ammonium salt for electroosmotic flow (EOF) reduction, a series of nonionic and anionic solutes dissolved either in the ME or in fat…

Clinical BiochemistryAnalytical chemistrySalt (chemistry)ElectrolyteBiochemistryAnalytical Chemistrychemistry.chemical_compoundElectrokinetic phenomenaPentanolsPlant OilsMicroemulsionAmmoniumSodium dodecyl sulfateDissolutionChromatography Micellar Electrokinetic Capillarychemistry.chemical_classificationAqueous solutionChromatographyElectrophoresis CapillaryReproducibility of ResultsSodium Dodecyl SulfateWaterDietary FatschemistryEmulsionsHydrophobic and Hydrophilic InteractionsELECTROPHORESIS
researchProduct

Reversed Phase Liquid Chromatography

2015

Countercurrent chromatographyChromatographyColumn chromatographyAqueous normal-phase chromatographyChemistryHydrophilic interaction chromatographySupercritical fluid chromatographyAnalytical chemistryReversed-phase chromatographyChromatography columnHigh-performance liquid chromatography
researchProduct

The differentiation antigen NY-BR-1 is a potential target for antibody-based therapies in breast cancer

2007

Antibody-based cancer immunotherapy relies on the identification and characterization of target antigens and the development of potent antibodies recognizing the target. Here we report the expression analysis and molecular characterization of the differentiation antigen NY-BR-1, which we previously identified by using the SEREX (serological analysis of recombinant cDNA expression libraries) method. Corroborating methodologies, including mRNA quantitation and immunoblotting show that NY-BR-1 is strongly expressed in >70% of 129 breast tumors. Application of a NY-BR-1 specific antibody demonstrated NY-BR-1 expression in primary and metastastic breast cancers. In contrast, most of the breast c…

CytoplasmCancer ResearchPathologymedicine.medical_specialtyRecombinant Fusion Proteinsmedicine.medical_treatmentCellular differentiationGreen Fluorescent ProteinsImmunoblottingBreast NeoplasmsBiologyTargeted therapyBreast cancerAntigenCancer immunotherapyAntigens NeoplasmCell Line TumormedicineHumansRNA MessengerBinding SitesMicroscopy ConfocalReverse Transcriptase Polymerase Chain ReactionCell MembraneAntibodies MonoclonalMembrane ProteinsFlow Cytometrymedicine.diseaseAntigens DifferentiationImmunohistochemistryTumor antigenGene Expression Regulation NeoplasticOncologyCancer researchbiology.proteinImmunohistochemistryFemaleAntibodyHydrophobic and Hydrophilic InteractionsInternational Journal of Cancer
researchProduct

Multifunctionality of F-rich nucleoporins

2020

Nucleoporins (Nups) represent a range of proteins most known for composing the macromolecular assembly of the nuclear pore complex (NPC). Among them, the family of intrinsically disordered proteins (IDPs) phenylalanine-glycine (FG) rich Nups, form the permeability barrier and coordinate the high-speed nucleocytoplasmic transport in a selective way. Those FG-Nups have been demonstrated to participate in various biological processes besides nucleocytoplasmic transport. The high number of accessible hydrophobic motifs of FG-Nups potentially gives rise to this multifunctionality, enabling them to form unique microenvironments. In this review, we discuss the multifunctionality of disordered and …

CytoplasmProtein FoldingDNA RepairPhenylalanineAmino Acid MotifsActive Transport Cell NucleusGlycineIntrinsically disordered proteinsBiochemistryArticle03 medical and health sciences0302 clinical medicineAnimalsHumansCell LineageCiliaNuclear pore030304 developmental biologyCell Nucleus0303 health sciencesChemistryNeurodegenerative DiseasesIntrinsically Disordered ProteinsNuclear Pore Complex ProteinsMacromolecular assemblyProtein TransportGene Expression RegulationNucleocytoplasmic TransportNuclear PoreBiophysicsNucleoporinHydrophobic and Hydrophilic Interactions030217 neurology & neurosurgeryBiological networkBiochemical Society Transactions
researchProduct

Acquisition of Structure-guiding and Structure-forming Properties during Maturation from the Pro-silicatein to the Silicatein Form

2012

Silicateins are the key enzymes involved in the enzymatic polycondensation of the inorganic scaffold of the skeletal elements of the siliceous sponges, the spicules. The gene encoding pro-silicatein is inserted into the pCold TF vector, comprising the gene for the bacterial trigger factor. This hybrid gene is expressed in Escherichia coli and the synthesized fusion protein is purified. The fusion protein is split into the single proteins with thrombin by cleavage of the linker sequence present between the two proteins. At 23 °C, the 87 kDa trigger factor-pro-silicatein fusion protein is cleaved to the 51 kDa trigger factor and the 35 kDa pro-silicatein. The cleavage process proceeds and res…

DNA ComplementaryPolymersRecombinant Fusion Proteins02 engineering and technologyPlasma protein bindingCleavage (embryo)Models BiologicalBiochemistry03 medical and health sciencesThrombinPEG ratioEscherichia colimedicineAnimalsMolecular Biology030304 developmental biologychemistry.chemical_classification0303 health sciencesbiologyPhotoelectron SpectroscopyTemperatureThrombinCell Biology021001 nanoscience & nanotechnologybiology.organism_classificationFusion proteinElasticityExtracellular MatrixPoriferaEnzymechemistryBiochemistryProtein Structure and FoldingPeptidesSuberites0210 nano-technologyHydrophobic and Hydrophilic InteractionsLinkerProtein Bindingmedicine.drugSuberitesJournal of Biological Chemistry
researchProduct

A Polyphenylene Dendrimer Drug Transporter with Precisely Positioned Amphiphilic Surface Patches

2014

The design and synthesis of a polyphenylene dendrimer (PPD 3) with discrete binding sites for lipophilic guest molecules and characteristic surface patterns is presented. Its semi-rigidity in combination with a precise positioning of hydrophilic and hydrophobic groups at the periphery yields a refined architecture with lipophilic binding pockets that accommodate defined numbers of biologically relevant guest molecules such as fatty acids or the drug doxorubicin. The size, architecture, and surface textures allow to even penetrate brain endothelial cells that are a major component of the extremely tight blood-brain barrier. In addition, low to no toxicity is observed in in vivo studies using…

DendrimersScaffoldEmbryo NonmammalianMaterials sciencePolymersStereochemistryBiomedical EngineeringPharmaceutical ScienceChemistry Techniques SyntheticBlood–brain barrierCell LineBiomaterialsMiceIn vivoDendrimerAmphiphilemedicineAnimalsHumansMoleculeTissue DistributionBinding siteZebrafishDrug CarriersBrainEndothelial CellsTransportermedicine.anatomical_structureDoxorubicinDrug DesignBiophysicsHydrophobic and Hydrophilic InteractionsAdvanced Healthcare Materials
researchProduct