Search results for "insertion"

showing 10 items of 393 documents

The C-terminal Domains of Apoptotic BH3-only Proteins Mediate Their Insertion into Distinct Biological Membranes

2016

Changes in the equilibrium of pro- and anti-apoptotic members of the B-cell lymphoma-2 (Bcl-2) protein family in the mitochondrial outer membrane (MOM) induce structural changes that commit cells to apoptosis. Bcl-2 homology-3 (BH3)-only proteins participate in this process by either activating pro-apoptotic effectors or inhibiting anti-apoptotic components and by promoting MOM permeabilization. The association of BH3-only proteins with MOMs is necessary for the activation and amplification of death signals; however, the nature of this association remains controversial, as these proteins lack a canonical transmembrane sequence. Here we used an in vitro expression system to study the inserti…

0301 basic medicineProtein familyCèl·lulesBiologyBiochemistryMitochondrial Proteins03 medical and health sciencesProtein DomainsMembranes (Biologia)Protein-fragment complementation assayMembrane BiologyMicrosomesProto-Oncogene ProteinsHumansMolecular BiologyAdaptor Proteins Signal TransducingGeneticsBcl-2-Like Protein 11030102 biochemistry & molecular biologyCell MembraneBcl-2 familyProteïnes de membranaMembrane ProteinsBiological membraneCell BiologyFusion proteinTransmembrane proteinCell biology030104 developmental biologyMembraneProto-Oncogene Proteins c-bcl-2Membrane proteinB-cell lymphoma 2 (Bcl-2) family BH3-only apoptosis membrane insertion membrane protein mitochondrial apoptosis transmembrane domainApoptosis Regulatory ProteinsHydrophobic and Hydrophilic InteractionsHeLa CellsJournal of Biological Chemistry
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Assembly of Spinach Chloroplast ATP Synthase Rotor Ring Protein-Lipid Complex

2019

Rotor ATPases are large multisubunit membrane protein complexes found in all kingdoms of life. The membrane parts of these ATPases include a ring-like assembly, so-called c-ring, consisting of several subunits c, plugged by a patch of phospholipids. In this report, we use a nature-inspired approach to model the assembly of the spinach (Spinacia oleracea) c14 ring protein-lipid complex, where partially assembled oligomers are pulled toward each other using a biasing potential. The resulting assemblies contain 23 to 26 encapsulated plug lipids, general position of which corresponds well to experimental maps. However, best fit to experimental data is achieved with 15 to 17 lipids inside the c-…

0301 basic medicineSpinaciaATPaseProtein subunitlipiditBiochemistry Genetics and Molecular Biology (miscellaneous)Biochemistrysolukalvotprotein-lipid interactions03 medical and health sciences0302 clinical medicinecomplex assemblymembrane insertionMolecular Biosciencesmembrane proteinProtein–lipid interactionlcsh:QH301-705.5Molecular BiologyOriginal ResearchbiologyATP synthaseannular lipidsChemistrybiology.organism_classificationadenosiinitrifosfaatti030104 developmental biologyMembranelcsh:Biology (General)Membrane proteinProtein-lipid complex030220 oncology & carcinogenesisbiology.proteinBiophysicslipids (amino acids peptides and proteins)proteiinitFrontiers in Molecular Biosciences
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panISa: ab initio detection of insertion sequences in bacterial genomes from short read sequence data.

2018

Abstract Motivation The advent of next-generation sequencing has boosted the analysis of bacterial genome evolution. Insertion sequence (IS) elements play a key role in prokaryotic genome organization and evolution, but their repetitions in genomes complicate their detection from short-read data. Results PanISa is a software pipeline that identifies IS insertions ab initio in bacterial genomes from short-read data. It is a highly sensitive and precise tool based on the detection of read-mapping patterns at the insertion site. PanISa performs better than existing IS detection systems as it is based on a database-free approach. We applied it to a high-risk clone lineage of the pathogenic spec…

0301 basic medicineStatistics and ProbabilityLineage (genetic)Computer scienceAb initioComputational biologyBacterial genome size[INFO.INFO-SE]Computer Science [cs]/Software Engineering [cs.SE]BiochemistryGenome[INFO.INFO-IU]Computer Science [cs]/Ubiquitous Computing03 medical and health sciences[INFO.INFO-CR]Computer Science [cs]/Cryptography and Security [cs.CR][SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Insertion sequenceMolecular BiologyGenomic organizationHigh-Throughput Nucleotide SequencingSequence Analysis DNA[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM][SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyPipeline (software)[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationComputer Science ApplicationsComputational Mathematics030104 developmental biologyComputational Theory and Mathematics[INFO.INFO-MA]Computer Science [cs]/Multiagent Systems [cs.MA]DNA Transposable Elements[INFO.INFO-ET]Computer Science [cs]/Emerging Technologies [cs.ET][INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]Genome BacterialSoftwareBioinformatics (Oxford, England)
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VISMapper: ultra-fast exhaustive cartography of viral insertion sites for gene therapy

2017

The possibility of integrating viral vectors to become a persistent part of the host genome makes them a crucial element of clinical gene therapy. However, viral integration has associated risks, such as the unintentional activation of oncogenes that can result in cancer. Therefore, the analysis of integration sites of retroviral vectors is a crucial step in developing safer vectors for therapeutic use. Here we present VISMapper, a vector integration site analysis web server, to analyze next-generation sequencing data for retroviral vector integration sites. VISMapper can be found at: http://vismapper.babelomics.org . Because it uses novel mapping algorithms VISMapper is remarkably faster t…

0301 basic medicineWeb serverVirus IntegrationGenetic enhancementGenetic VectorsContext (language use)Computational biologyBiologyGenoma humàlcsh:Computer applications to medicine. Medical informaticscomputer.software_genreBiochemistryGenome viewerViral vectorViral integrationUser-Computer Interface03 medical and health sciencesGene therapyStructural BiologySAFERViral insertionSequence mappingHumansUltra fastGens Mapatgelcsh:QH301-705.5Molecular BiologyGeneticsInternetBase SequenceApplied MathematicsHigh-Throughput Nucleotide SequencingGenetic Therapy3. Good healthComputer Science Applications030104 developmental biologylcsh:Biology (General)lcsh:R858-859.7Viral integrationDNA microarraycomputerSoftware
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Études scientifiques et marché du travail : éléments de réflexion sur la crise des formations en sciences

2007

Student disaffection towards sciences, most evident in pure science undergraduates, is causing increasing concern for the future of scientific training in France. If access to employment deteriorates more for science graduates than for graduates in other disciplines, science graduates will have a distinct advantage in terms of earnings and employment status, when the economic situation becomes less favourable. Within sciences, graduates of pure sciences have a more difficult transition from education to employment than those from applied sciences. Yet graduates from both disciplines compete for the same job in the private sector with pure science graduates receiving lower wages. The “crisis…

050402 sociologyAttractivitéSocial PsychologyScience[SHS.EDU]Humanities and Social Sciences/Education[SHS.EDU] Humanities and Social Sciences/EducationCompétenceEnseignement supérieurEducation[SHS]Humanities and Social Sciences0504 sociologySciencesCompétencesOrientation0502 economics and businessDevelopmental and Educational Psychology[ SHS.ECO ] Humanities and Social Sciences/Economies and financesFormation scientifiqueDiploma[SHS.ECO] Humanities and Social Sciences/Economics and FinanceFilière sciences4. EducationSkills05 social sciencesInsertion professionnelleDiplôme[ SHS.EDU ] Humanities and Social Sciences/EducationTertiary education[SHS.ECO]Humanities and Social Sciences/Economics and FinanceOrientation scolaire et professionnelleTransition from school to work8. Economic growthGuidance050203 business & managementMarché du travail
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Le sentiment de discrimination des descendants d'immigrés : reflet d'une orientation contrariée et d'un chômage persistant

2012

National audience; La discrimination est analysée ici en croisant les perceptions des jeunes avec la réalité de leur insertion sur le marché du travail et de leur parcours d'éducation. Une orientation contrariée en fin de troisième a un impact sur les trajectoires ultérieures, comme l'obtention d'un emploi. Certes, le chômage est lié au niveau d'études, mais les descendants d'immigrés originaires du Maghreb ou d'Afrique subsaharienne y sont surexposés, mettant en relief une discrimination à l'embauche, discrimination vivement ressentie par les jeunes eux-mêmes.

050402 sociology[SHS.EDU]Humanities and Social Sciences/Education05 social sciences[SHS.EDU] Humanities and Social Sciences/EducationInsertion professionnelle050301 educationOcean EngineeringEnfant de migrant[ SHS.EDU ] Humanities and Social Sciences/Education16. Peace & justiceOrientation scolaire et professionnelle0504 sociologyChômageDiscriminationJeunePerception10. No inequality0503 education
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Selective downregulation of the MDR1 gene product in Caco-2 cells by stable transfection to prove its relevance in secretory drug transport.

2005

Considerable interest is focused on overcoming multidrug resistance (MDR) in cancer chemotherapy. The in vitro experiments to characterize P-glycoprotein's (P-gp) function and to decrease its effects have led to a variety of strategies such as addition of competitors or supplementation of the medium with oligonucleotides complementary to the 5'-end of the MDR1-mRNA. For the Caco-2 cell line, an in vitro model for absorption screening, expressing multiple transporters including P-gp, which pumps substances back into the apical solution, P-gp activity might mask other relevant transport proteins' activity. The objective of the present study was to construct a Caco-2 subline with reduced P-gp …

ATP Binding Cassette Transporter Subfamily BTime FactorsPharmaceutical ScienceDown-RegulationBiologyTransfectionPermeabilityPropanolaminesDownregulation and upregulationDrug DiscoveryHumansNorthern blotOligonucleotideReverse Transcriptase Polymerase Chain ReactionElectroporationBiological TransportTransfectionFlow CytometryMolecular biologyIn vitroTransport proteinClone CellsMutagenesis InsertionalVerapamilCell cultureMolecular MedicineCaco-2 CellsGenes MDRMolecular pharmaceutics
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La réinsertion professionnelle des femmes

1973

Action de formationFemmeDijon[SHS.EDU] Humanities and Social Sciences/EducationBourgogneFranceRéinsertion professionnelle[SHS.ECO] Humanities and Social Sciences/Economics and FinanceComputingMilieux_MISCELLANEOUS
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Les enseignements des actions pilotes destinées aux jeunes sortis sans qualification du système scolaire

1983

International audience

Action de formation[SHS.EDU]Humanities and Social Sciences/Education[SHS.EDU] Humanities and Social Sciences/EducationInsertion professionnelleJeune sans qualificationFranceComputingMilieux_MISCELLANEOUS
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Does angiotensin-converting enzyme gene polymorphism affect blood pressure? Findings after 6 years of follow-up in healthy subjects.

2003

Background: There has been an increase in research into the association between angiotensin-converting enzyme (ACE) gene deletion polymorphism and cardiovascular disease, with conflicting results. The present prospective long-term study was conducted to evaluate whether the DD genotype could also be associated with a higher prevalence of hypertension in healthy subjects, over 6 years of follow-up. Methods: Population: 684 healthy volunteers (aged, 25–55 years): normotensive and free of cardiovascular diseases, with acceptable echocardiographic window. All subjects had to have a normal electrocardiogram (ECG) and echocardiogram (ECHO) at entry. Study protocol: All subjects underwent a comple…

AdultMaleACE-I/D gene polymorphismmedicine.medical_specialtyTime FactorsGenotypePopulationBlood PressurePeptidyl-Dipeptidase AReference ValuesInternal medicineMedicineHumansProspective StudiesFamily historyeducationeducation.field_of_studyPolymorphism Geneticbiologybusiness.industryIncidence (epidemiology)IncidenceAngiotensin-converting enzymeVenous bloodMiddle Agedmedicine.diseaseMutagenesis InsertionalEndocrinologyBlood pressureHeart failureHypertensionbiology.proteinFemaleGene polymorphismCardiology and Cardiovascular MedicinebusinessHealthy subjectGene DeletionFollow-Up StudiesEuropean journal of heart failure
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