Search results for "insulator"
showing 10 items of 228 documents
Accessing finite momentum excitations of the one-dimensional Bose-Hubbard model using superlattice modulation spectroscopy
2018
We investigate the response to superlattice modulation of a bosonic quantum gas confined to arrays of tubes emulating the one-dimensional Bose-Hubbard model. We demonstrate, using both time-dependent density matrix renormalization group and linear response theory, that such a superlattice modulation gives access to the excitation spectrum of the Bose-Hubbard model at finite momenta. Deep in the Mott-insulator, the response is characterized by a narrow energy absorption peak at a frequency approximately corresponding to the onsite interaction strength between bosons. This spectroscopic technique thus allows for an accurate measurement of the effective value of the interaction strength. On th…
Topological Devil's staircase in atomic two-leg ladders
2019
Abstract We show that a hierarchy of topological phases in one dimension—a topological Devil’s staircase—can emerge at fractional filling fractions in interacting systems, whose single-particle band structure describes a topological or a crystalline topological insulator. Focusing on a specific example in the BDI class, we present a field-theoretical argument based on bosonization that indicates how the system, as a function of the filling fraction, hosts a series of density waves. Subsequently, based on a numerical investigation of the low-lying energy spectrum, Wilczek–Zee phases, and entanglement spectra, we show that they are symmetry protected topological phases. In sharp contrast to t…
CTCF and BORIS Regulate Rb2/p130 Gene Transcription: A Novel Mechanism and a New Paradigm for Understanding the Biology of Lung Cancer
2011
Abstract Although innumerable investigations regarding the biology of lung cancer have been carried out, many aspects thereof remain to be addressed, including the role played by the retinoblastoma-related protein Rb2/p130 during the evolution of this disease. Here we report novel findings on the mechanisms that control Rb2/p130 gene expression in lung fibroblasts and characterize the effects of Rb2/p130 deregulation on the proliferative features of lung cancer cells. We revealed for the first time that in lung fibroblasts the expression of Rb2/p130 gene is directly controlled by the chromatin insulator CCCTC-binding factor, CTCF, which by binding to the Rb2/p130 gene promoter induces, and/…
The Ambulacraria-specific COMPASS-like protein contributes to sns5 chromatin insulator function in the sea urchin embryo
2013
The Compass-like Locus, Exclusive to the Ambulacrarians, Encodes a Chromatin Insulator Binding Protein in the Sea Urchin Embryo
2013
Chromatin insulators are eukaryotic genome elements that upon binding of specific proteins display barrier and/or enhancer-blocking activity. Although several insulators have been described throughout various metazoans, much less is known about proteins that mediate their functions. This article deals with the identification and functional characterization in Paracentrotus lividus of COMPASS-like (CMPl), a novel echinoderm insulator binding protein. Phylogenetic analysis shows that the CMPl factor, encoded by the alternative spliced Cmp/Cmpl transcript, is the founder of a novel ambulacrarian-specific family of Homeodomain proteins containing the Compass domain. Specific association of CMPl…
Observation of topological gravity-capillary waves in a water wave crystal
2019
The discovery of topological phases of matter, initially driven by theoretical advances in quantum condensed matter physics, has been recently extended to classical wave systems, reaching out to a wealth of novel potential applications in signal manipulation and energy concentration. Despite the fact that many realistic wave media (metals at optical frequencies, polymers at ultrasonic frequencies) are inherently dispersive, topological wave transport in photonic and phononic crystals has so far been limited to ideal situations and proof-of-concept experiments involving dispersionless media. Here, we report the first experimental demonstration of topological edge states in a classical water …
Steering molecular island morphology on an insulator surface by exploiting sequential deposition
2011
Depending on the deposition order in coadsorption of C(60) and SubPc molecules on CaF(2) (111), distinctly different island morphologies can be obtained. We demonstrate that non-equilibrium processes can play a significant role in molecular structure formation and constitute a new route for complex molecular patterning of an insulating surface.
Down-regulation of early sea urchin histone H2A gene relies on cis regulative sequences located in the 5' and 3' regions and including the enhancer b…
2004
The tandem repeated sea urchin alpha-histone genes are developmentally regulated by gene-specific promoter elements. Coordinate transcription of the five genes begins after meiotic maturation of the oocyte, continues through cleavage, and reaches its maximum at morula stage, after which these genes are shut off and maintained in a silenced state for the life cycle of the animal. Although cis regulative sequences affecting the timing and the level of expression of these genes have been characterized, much less is known about the mechanism of their repression. Here we report the results of a functional analysis that allowed the identification of the sequence elements needed for the silencing …
The Sea Urchin sns5 Insulator Protects Retroviral Vectors From Chromosomal Position Effects by Maintaining Active Chromatin Structure
2009
Silencing and position-effect (PE) variegation (PEV), which is due to integration of viral vectors in heterochromatin regions, are considered significant obstacles to obtaining a consistent level of transgene expression in gene therapy. The inclusion of chromatin insulators into vectors has been proposed to counteract this position-dependent variegation of transgene expression. Here, we show that the sea urchin chromatin insulator, sns5, protects a recombinant gamma-retroviral vector from the negative influence of chromatin in erythroid milieu. This element increases the probability of vector expression at different chromosomal integration sites, which reduces both silencing and PEV. By chr…