Search results for "ion channels"

showing 10 items of 137 documents

Mislabel Detection of Finnish Publication Ranks

2019

The paper proposes to analyze a data set of Finnish ranks of academic publication channels with Extreme Learning Machine (ELM). The purpose is to introduce and test recently proposed ELM-based mislabel detection approach with a rich set of features characterizing a publication channel. We will compare the architecture, accuracy, and, especially, the set of detected mislabels of the ELM-based approach to the corresponding reference results on the reference paper.

FOS: Computer and information sciencesComputer Science - Machine LearningComputer sciencerankinglistatMachine Learning (stat.ML)computer.software_genreMachine Learning (cs.LG)Set (abstract data type)Statistics - Machine LearningDigital Libraries (cs.DL)julkaisukanavatvirheanalyysimislabel detectionExtreme learning machineExtreme Learning Machine (ELM)publication channelsComputer Science - Digital LibrariesData setkoneoppiminendataData miningrankingsarviointicomputertieteellinen julkaisutoimintaCommunication channel
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Lack of SCN1A Mutations in Familial Febrile Seizures

2002

Summary:  Purpose: Mutations in the voltage-gated sodium channel subunit gene SCN1A have been associated with febrile seizures (FSs) in autosomal dominant generalized epilepsy with febrile seizures plus (GEFS+) families and severe myoclonic epilepsy of infancy. The present study assessed the role of SCN1A in familial typical FSs. Methods: FS families were selected throughout a collaborative study of the Italian League Against Epilepsy. For each index case, the entire coding region of SCN1A was screened by denaturant high-performance liquid chromatography. DNA fragments showing variant chromatograms were subsequently sequenced. Results: Thirty-two FS families accounting for 91 affected indiv…

GAMMA-2-SUBUNITMaleFebrile convulsionsDNA Mutational Analysismedicine.disease_causePolymerase Chain ReactionSodium ChannelsFebrileEpilepsyExonPLUSDNA Mutational AnalysisGene duplicationChildIndex caseChromatography High Pressure LiquidGeneticsChromatographyMutationIdiopathic epilepsyExonsNeurologyIon channelsHigh Pressure LiquidFemaleGeneralized epilepsy with febrile seizures plusMutationsAdultAdolescentGENERALIZED EPILEPSYNerve Tissue ProteinsSeizures FebrileSeizuresGeneticsmedicineHumansFamilybusiness.industryCONVULSIONSGene AmplificationSODIUM-CHANNELmedicine.diseaseGENEDYSFUNCTIONNAV1.1 Voltage-Gated Sodium ChannelFebrile convulsions; Genetics; Idiopathic epilepsy; Ion channels; Mutations; Adolescent; Adult; Child; Chromatography High Pressure Liquid; DNA Mutational Analysis; Exons; Female; Gene Amplification; Humans; Male; Mutation; NAV1.1 Voltage-Gated Sodium Channel; Nerve Tissue Proteins; Polymerase Chain Reaction; Seizures Febrile; Sodium Channels; FamilyMutationMyoclonic epilepsyNeurology (clinical)businessEpilepsia
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From non-excitable single-cell to multicellular bioelectrical states supported by ion channels and gap junction proteins: Electrical potentials as di…

2019

Endogenous bioelectric patterns within tissues are an important driver of morphogenesis and a tractable component of a number of disease states. Developing system-level understanding of the dynamics by which non-neural bioelectric circuits regulate complex downstream cascades is a key step towards both, an evolutionary understanding of ion channel genes, and novel strategies in regenerative medicine. An important capability gap is deriving rational modulation strategies targeting individual cells' bioelectric states to achieve global (tissue- or organ-level) outcomes. Here, we develop an ion channel-based model that describes multicellular states on the basis of spatio-temporal patterns of …

Gap Junction Proteins030303 biophysicsCellBiophysicsCell CommunicationRegenerative medicineModels BiologicalConnexinsIon ChannelsCell membrane03 medical and health sciencesmedicineMorphogenesisAnimalsHumansMolecular BiologyIon channelPhysics0303 health sciencesCell potentialElectrical potentialsGap JunctionsElectrophysiological PhenomenaMulticellular organismmedicine.anatomical_structureSingle-Cell AnalysisNeuroscienceSignal TransductionProgress in biophysics and molecular biology
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Calcium binding and ionic conduction in single conical nanopores with polyacid chains: model and experiments.

2012

Calcium binding to fixed charge groups confined over nanoscale regions is relevant to ion equilibrium and transport in the ionic channels of the cell membranes and artificial nanopores. We present an experimental and theoretical description of the dissociation equilibrium and transport in a single conical nanopore functionalized with pH-sensitive carboxylic acid groups and phosphonic acid chains. Different phenomena are simultaneously present in this basic problem of physical and biophysical chemistry: (i) the divalent nature of the phosphonic acid groups fixed to the pore walls and the influence of the pH and calcium on the reversible dissociation equilibrium of these groups; (ii) the asym…

General Physics and AstronomyIonic bondingFunctionalizedDissociation (chemistry)Conical nanoporeNanoscale regionschemistry.chemical_compoundNanoporesI - V curveIonic conductivityGeneral Materials ScienceConical nanoporesPhosphonate groupCalcium concentrationChemistryGeneral EngineeringPH effectsPartition functionsIonic channelsIon equilibriumReversible dissociationChemical physicsFunctional groupsThermodynamicsDesalination membranesIon bindingPorosityDissociationBiophysical chemistryDissociation equilibriaInorganic chemistrychemistry.chemical_elementWater filtrationCalciumIonNernst-Planck equationsApplied potentialsIon bindingCarboxylationPhosphonic acidsComputer SimulationCarboxylateParticle SizeControlled drug releaseCurrent voltage curveIonsBinding SitesFixed charge densityPH sensitiveCarboxylic acidsDesalinationPhosphonic acid groupsPoly acidsElectric ConductivityCarboxylic acid groupsFixed ChargesNanostructuresCell membranesCurrent-voltage curvesModels ChemicalQuantum theoryFISICA APLICADACalciumBiological ion channelsCalcium bindingIonic currentCytologyPore wallStatistical mechanicsAcidsACS nano
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Polycystin-1 downregulation induces ERK-dependent mTOR pathway activation in a cellular model of psoriasis

2018

Psoriatic plaques tend to localize to the knees and elbows, areas that are particularly subject to mechanical stress resulting from bending and friction. Moreover, plaques often develop at sites of mechanical trauma or injury (Koebner phenomenon). Nevertheless, mechanotransduction has never been linked to psoriasis. Polycystins (polycystin-1, PC1; polycystin-2, PC2) are mechanosensitive molecules that function as key regulators of cellular mechanosensitivity and mechanotransduction. The aim of this in vitro study was to investigate the role of polycystins in the development of psoriasis. We showed that PC1 knockdown in HaCaT cells led to an elevated mRNA expression of psoriasis-related biom…

Genetic Markers0301 basic medicineMAPK/ERK pathwayendocrine systemTRPP Cation ChannelsMAP Kinase Signaling SystemDown-RegulationModels BiologicalCell Line03 medical and health sciences0302 clinical medicineDownregulation and upregulationCell MovementPsoriasismedicineHumansPsoriasisMechanotransductionMolecular BiologyPI3K/AKT/mTOR pathwayCell ProliferationGene knockdownCell growthChemistryTOR Serine-Threonine Kinasesmedicine.diseaseCell biologyHaCaT030104 developmental biologyGene Knockdown Techniques030220 oncology & carcinogenesisMolecular MedicineBiochimica et Biophysica Acta (BBA) - Molecular Basis of Disease
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The cGMP-gated channel of the rod photoreceptor — a new type of channel structure?

1990

Recents findings from Numa's laboratory reveal that there might exist a wider variety in channel protein structure than originally anticipated. Recently, the cloning has been reported of the first cGMP-gated ion channel, the vertebrate rod photoreceptor which is activated by cGMP acting from the inside of the rod outer segment membrane

Geneticsgenetic structuresProtein ConformationChemistryBiochemistryIon ChannelsTransmembrane proteinCyclic gmpRod PhotoreceptorsProtein structureBiophysicsAnimalsPhotoreceptor Cellssense organsCyclic GMPMolecular BiologyIon channelCommunication channelTrends in Biochemical Sciences
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Peroxisome proliferator-activated receptors as regulators of lipid metabolism; tissue differential expression in adipose tissues during cold acclimat…

2004

Brown (BAT) and white (WAT) adipose tissues play a key role in the body energy balance orchestrated by the central nervous system. Hibernators have developed a seasonal obesity to respond to inhospitable environment. Jerboa is one of the deep hibernator originated from sub-desert highlands. Thus, this animal represents an excellent model to study cold adaptation mechanism. We report that the adipogenic factor PPARgamma exhibits a differential expression between BAT and WAT at mRNA level. A specific induction was only seen in WAT of pre-hibernating jerboa. Interestingly, PPAR beta/delta is specifically induced in BAT and brain of pre-hibernating jerboa, highlighting for the first time the po…

Hibernationmedicine.medical_specialtyAcclimatizationPeroxisome Proliferator-Activated ReceptorsPeroxisome proliferator-activated receptorAdipose tissueRodentiaWhite adipose tissueBiologyBiochemistryAcyl-CoA DehydrogenaseIon ChannelsMitochondrial ProteinsClofibric AcidInternal medicineHibernationBrown adipose tissuemedicineAcyl-CoA oxidaseAnimalsRNA MessengerUncoupling Protein 1chemistry.chemical_classificationFibric AcidsMembrane ProteinsGeneral MedicineLipid MetabolismLipidsMitochondriaCold TemperatureEndocrinologymedicine.anatomical_structurechemistryAdipose TissueGene Expression RegulationPhospholipasesCiprofibrateAcyl-CoA OxidaseCarrier ProteinsEnergy MetabolismOxidoreductasesThermogenesismedicine.drugBiochimie
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Cannabinoids, TRPV and nitric oxide: the three ring circus of neuronal excitability

2019

Endocannabinoid system is considered a relevant player in the regulation of neuronal excitability, since it contributes to maintaining the balance of the synaptic ionic milieu. Perturbations to bioelectric conductances have been implicated in the pathophysiological processes leading to hyperexcitability and epileptic seizures. Cannabinoid influence on neurosignalling is exerted on classic receptor-mediated mechanisms or on further molecular targets. Among these, transient receptor potential vanilloid (TRPV) are ionic channels modulated by cannabinoids that are involved in the transduction of a plethora of stimuli and trigger fundamental downstream pathways in the post-synaptic site. In this…

HistologySynaptic transmission.medicine.medical_treatmentHippocampusTRPV Cation ChannelsHyperexcitabilityNeurotransmissionTRPVSettore BIO/09 - Fisiologia050105 experimental psychologyNitric oxide03 medical and health sciencesTransient receptor potential channelchemistry.chemical_compound0302 clinical medicineHippocampuSeizuresmedicineAnimalsHumans0501 psychology and cognitive sciencesEndocannabinoidNeuronsEpilepsyChemistryCannabinoidsGeneral Neuroscience05 social sciencesBrainNitric oxideEndocannabinoid systemElectrophysiological PhenomenaTRPVCortical ExcitabilityCannabinoidAnatomyTransduction (physiology)Neuroscience030217 neurology & neurosurgeryEndocannabinoidsSignal Transduction
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Effects of Anandamide and Noxious Heat on Intracellular Calcium Concentration in Nociceptive DRG Neurons of Rats

2007

As an endogenous agonist at the cannabinoid receptor CB1 and the capsaicin-receptor TRPV1, anandamide may exert both anti- and pronociceptive actions. Therefore we studied the effects of anandamide and other activators of both receptors on changes in free cytosolic calcium ([Ca2+]i) in acutely dissociated small dorsal root ganglion neurons (diameter: ≤30 μm). Anandamide (10 μM) increased [Ca2+]iin 76% of the neurons. The EC50was 7.41 μM, the Hill slope was 2.15 ± 0.43 (mean ± SE). This increase was blocked by the competitive TRPV1-antagonist capsazepine (10 μM) and in Ca2+-free extracellular solution. Neither exclusion of voltage-gated sodium channels nor additional blockade of voltage-gate…

Hot TemperatureCannabinoid receptorPolyunsaturated AlkamidesPhysiologyTRPV1TRPV Cation ChannelsArachidonic AcidsPharmacologyCalcium in biologyRats Sprague-Dawleychemistry.chemical_compoundGanglia SpinalPhysical StimulationAnimalsDrug InteractionsDronabinolEgtazic AcidChelating AgentsNeuronsCalcium metabolismAnalysis of VarianceDose-Response Relationship DrugChemistryGeneral NeuroscienceExtracellular FluidAnandamideCalcium Channel BlockersEndocannabinoid systemRatsNociceptionCalciumCapsaicinEndogenous agonistEndocannabinoidsJournal of Neurophysiology
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Optical Gating of Photosensitive Synthetic Ion Channels

2011

4-oxo-4-(pyren-4-ylmethoxy) butanoic acid is used as a photolabile protecting group to show the optical gating of nanofluidic devices based on synthetic ion channels. The inner surface of the channels is decorated with monolayers of photolabile hydrophobic molecules that can be removed by irradiation, which leads to the generation of hydrophilic groups. This process can be exploited in the UV-light-triggered permselective transport of ionic species in aqueous solution through the channels. The optical gating of a single conical nanochannel and multichannel polymeric membranes is characterised experimentally and theoretically by means of current-voltage and selective permeation measurements,…

Hydrophilic groupsMaterials scienceSynthetic ion channelsLight sensitive materialsHydrophobicitySynthetic membraneNanotechnologyNano-fluidic devicesGatingIonIonic transportsBiomaterialsPolymeric membranesOptical gatingPhotosensitivityOptical gatingsSynthetic ion channelsMonolayerElectrochemistryControlled releasePhotolabile protecting groupsIonic speciesPolymer membranesHydrophobic moleculesFunctional polymersSelective permeationHydrophilicityMultifunctional devicesMonolayersIonsAqueous solutionCurrent rectificationUV-light irradiationMulti-channelPermeationCondensed Matter PhysicsNanostructuresElectronic Optical and Magnetic MaterialsData processingPhotosensitive nanostructuresFISICA APLICADAIrradiationNano channelsInner surfacesFunctional polymersCurrent voltageAdvanced Functional Materials
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