Search results for "label"

showing 10 items of 797 documents

Identification of Purine Binding Sites on Torpedo Acetylcholine Receptor

1994

Electrophysiological studies from this and other laboratories have suggested a direct action of ATP on nicotinic acetylcholine receptors (nAChR). To determine the site of binding of this purine derivative, we have covalently modified the nAChR from Torpedo marmorata electrocytes employing 2-[3H]-8-azido-ATP as a photoactivable affinity label. Covalently attached radioactivity was predominantly found in the beta-polypeptide of the receptor. Based on the results of protection studies with several nAChR ligands whose target sites at the receptor are known, we conclude that the purine site(s) differ from those of acetylcholine and of physostigmine, galanthamine and related ligands, and those of…

PharmacologyPurineAzidesBinding SitesbiologyChemistryAffinity labelAffinity LabelsReceptors NicotinicTorpedolaw.inventionchemistry.chemical_compoundAdenosine TriphosphateNicotinic agonistBiochemistrylawbiology.proteinmedicineAnimalsBinding siteReceptorTorpedoAcetylcholinemedicine.drugAcetylcholine receptorJournal of Receptor Research
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Approaching ‘kit-type’ labelling with 68Ga : the DATA chelators.

2015

The DATA chelators are a novel class of tri-anionic ligands based on 6-amino-1,4-diazepine-triacetic acid, which have been introduced recently for the chelation of (68)Ga. Compared with macrocyclic chelators based on the cyclen scaffold (i.e., DOTA, DO3A, and DO2A derivatives), DATA chelators undergo quantitative radiolabelling more rapidly and under milder conditions. In this study, a systematic evaluation of the labelling of four DATA chelators--DATA(M), DATA(P), DATA(Ph), and DATA(PPh)--with (68)Ga is presented. The results highlight the extraordinary potential of this new class of chelators for application in molecular imaging using (68)Ga positron emission tomography (PET).

PharmacologyStereochemistryRadiopharmaceuticals.Organic ChemistryGallium-68Gallium RadioisotopesBiochemistryLigand designchemistry.chemical_compoundKineticsMacrocyclic ligandsCyclenchemistryLabellingIsotope LabelingDrug DiscoveryChelatesMolecular MedicineDOTAChelationGeneral Pharmacology Toxicology and PharmaceuticsMolecular imagingChelating Agents
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Photochemical and photobiological studies with acridine and phenanthridine hydroperoxides in cell-free DNA.

1997

The acridine and phenanthridine hydroperoxides 3 and 7 were synthesized as photochemical hydroxyl radical sources for oxidative DNA damage studies. The generation of hydroxyl radicals upon UVA irradiation (lambda = 350 nm) was verified by trapping experiments with 5,5-dimethyl-1-pyrroline N-oxide and benzene. The enzymatic assays of the damage in cell-free DNA from bacteriophage PM2 caused by the acridine and phenanthridine hydroperoxides 3 and 7 under near-UVA irradiation revealed a wide range of DNA modifications. Particularly, extensive single-strand break formation and DNA base modifications sensitive to formamidopyrimidine DNA glycosylase (Fpg protein) were observed. In the photooxidat…

PhenanthridineCell-Free SystemDNA damageDNA SuperhelicalHydroxyl RadicalPhotochemistryUltraviolet RaysRadicalGeneral MedicineFormamidopyrimidine DNA glycosylasePhotochemistryBiochemistryPhotoinduced electron transferPeroxidesCyclic N-Oxideschemistry.chemical_compoundchemistryAcridineHydroxyl radicalSpin LabelsPhysical and Theoretical ChemistryOxidation-ReductionDNADNA DamagePhotochemistry and photobiology
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NODAPA-OH and NODAPA-(NCS)n: Synthesis, 68Ga-radiolabelling and in vitro characterisation of novel versatile bifunctional chelators for molecular ima…

2008

This report concerns synthesis, (68)Ga-radiolabelling and stability data of 1,4,7-triazacyclononane-1,4-diacetic acid-7-p-isothio-cyanatophenyl-acetic acid (NODAPA-NCS), 1,4,7-triazacyclononane-1-acetic acid-4,7-di-p-isothiocyanatophenyl-acetic acid (NODAPA-(NCS)(2)) and 1,4,7-triazacyclononane-1,4-diacetic acid-7-p-hydroxyphenyl-acetic acid (NODAPA-OH), versatile bifunctional chelators with potential for molecular imaging. Protein binding and exemplified conjugation are also reported.

PhenylacetatesStereochemistryChemistry PharmaceuticalClinical BiochemistryLysinePharmaceutical ScienceGallium RadioisotopesIn Vitro TechniquesBiochemistryChemical synthesisHeterocyclic Compounds 1-Ringchemistry.chemical_compoundHeterocyclic CompoundsDrug DiscoveryChelationBifunctionalMolecular BiologyChelating AgentsPhenylacetatesRadioisotopesOrganic ChemistryHydrogen-Ion ConcentrationModels ChemicalchemistryAminosugarDrug DesignIsotope LabelingPositron-Emission TomographyMolecular MedicineChemical stabilityMolecular imagingBioorganic & Medicinal Chemistry Letters
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Recombinant water-soluble chlorophyll protein from Brassica oleracea var. Botrys binds various chlorophyll derivatives.

2003

A gene coding for water-soluble chlorophyll-binding protein (WSCP) from Brassica oleracea var. Botrys has been used to express the protein, extended by a hexahistidyl tag, in Escherichia coli. The protein has been refolded in vitro to study its pigment binding behavior. Recombinant WSCP was found to bind two chlorophylls (Chls) per tetrameric protein complex but no carotenoids in accordance with previous observations with the native protein [Satoh, H., Nakayama, K., Okada, M. (1998) J. Biol. Chem. 273, 30568-30575]. WSCP binds Chl a, Chl b, bacteriochlorophyll a, and the Zn derivative of Chl a but not pheophytin a, indicating that the central metal ion in Chl is essential for binding. WSCP …

PheophytinChlorophyllProtein FoldingDNA PlantLightTetrameric proteinPhotochemistryPigment bindingPhotosynthetic Reaction Center Complex ProteinsLight-Harvesting Protein ComplexesProtoporphyrinsmacromolecular substancesBrassicaBiologyBiochemistrychemistry.chemical_compoundPigmentPhytolpolycyclic compoundsChlorophyll bindingChlorophyllidesSinglet OxygenCircular DichroismElectron Spin Resonance Spectroscopyfood and beveragesWaterCarotenoidsRecombinant ProteinsBiochemistrychemistrySolubilitySpectrophotometryChlorophyllvisual_artvisual_art.visual_art_mediumProtein foldingSpin LabelsOxidation-ReductionBiochemistry
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Biotin-Labelled and Photoactivatable Aldosterone and Progesterone Derivatives as Ligands for Affinity Chromatography, Fluorescence Immunoassays and P…

1996

New derivatives of progesterone and aldosterone were synthesized and functionally tested with commercially available antibodies. The covalent labelling of antibodies specific for aldosterone and progesterone was detected by SDS/PAGE analysis and subsequent autoradiography after using 3-(O-carboxymethyl)-oximino-(3-[125I]iodo-4-azidosalicylamidobu tylamine) derivatives of aldosterone and progesterone, respectively, as photoactivatable radioligands. Labelling was not observed in the presence of an excess of the unlabelled steroid. Aldosterone was labelled with biotin and used as a tracer in a time-resolved fluorescence immunoassay. The nonradioactive tracer is highly selective for its antibod…

Photochemistrymedicine.medical_treatmentAffinity labelBiotinFluorescent Antibody TechniqueLigandsBiochemistryAntibodiesChromatography AffinitySteroidchemistry.chemical_compoundBiotinAffinity chromatographyLabellingmedicineAnimalsAldosteroneProgesteroneAldosteroneChromatographyProgesterone CongenersPhotoaffinity labelingbiologyAffinity LabelsSerum Albumin BovinechemistryBiochemistryPolyclonal antibodiesbiology.proteinCattleEuropean Journal of Biochemistry
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Photoreceptor vitality in organotypic cultures of mature vertebrate retinas validated by light-dependent molecular movements

2006

AbstractVertebrate photoreceptor cells are polarized neurons highly specialized for light absorption and visual signal transduction. Photoreceptor cells consist of the light sensitive outer segment and the biosynthetic active inner segment linked by a slender connecting cilium. The function of mature photoreceptor cells is strictly dependent on this compartmentalization which is maintained in the specialized retinal environment. To keep this fragile morphologic and functional composition for further cell biological studies and treatments we established organotypic retina cultures of mature mice and Xenopus laevis. The organotypic retina cultures of both model organisms are created as co-cul…

Photoreceptorsgenetic structuresMouseXenopusCellved/biology.organism_classification_rank.speciesXenopusGene deliverySignal transductionRetinaMicechemistry.chemical_compoundOrgan Culture TechniquesOrganotypic retina cultureIn Situ Nick-End LabelingmedicineAnimalsPhotoreceptor CellsTransducinModel organismVision OcularRetinaArrestinbiologyved/biologyRetinalbiology.organism_classificationLight-dependent movementsSensory Systemseye diseasesCell biologyMice Inbred C57BLProtein TransportOphthalmologymedicine.anatomical_structureMicroscopy FluorescencechemistryCell cultureVertebratesTransducinsense organsPhotic StimulationVision Research
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Magnetized boxes for housing polarized spins in homogeneous fields

2010

Abstract We present novel types of permanently magnetized as well as current powered boxes built from soft-ferromagnetic materials. They provide shielded magnetic fields which are homogeneous within a large fraction of the enclosed volume, thus minimizing size, weight, and costs. For the permanently magnetized solutions, homogenization is achieved either by an optimized distribution of the permanent field sources or by jacketing the field with a soft-ferromagnetic cylindrical shell which is magnetized in parallel to the enclosed field. The latter principle may be applied up to fields of about 0.1 T. With fields of about 1 mT, such boxes are being used for shipping spin-polarized 3 He worldw…

PhysicsNuclear and High Energy PhysicsCondensed matter physicsSpinsBiophysicsMechanicsModels TheoreticalCondensed Matter PhysicsBiochemistryHomogenization (chemistry)Magnetic fieldlaw.inventionMagneticsElectromagnetic FieldsHomogeneouslawShielded cableComputer SimulationSpin LabelsJournal of Magnetic Resonance
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A new method for the labelling of proteins with radioactive arsenic isotopes

2006

Abstract  Radioarsenic labelled radiopharmaceuticals could be a valuable asset to positron emission tomography. In particular, the long half-lives of 72As ( T 1 / 2 = 26 h ) and 74As ( T 1 / 2 = 17.8 d ) allow to investigate slow physiological or metabolical processes, like the enrichment and distribution of monoclonal antibodies (mab) in tumour tissue. In this work, a new method for the labelling of proteins with various radioactive arsenic isotopes was developed. For this purpose, two proteins, namely a chimeric IgG3 monoclonal antibody, ch3G4, directed against anionic phospholipids, and Rituxan (Rituximab), were labelled as a proof of principle with no-carrier-added radioarsenic isotopes…

PhysicsNuclear and High Energy PhysicsIsotopeMolecular massmedicine.drug_classRadiochemistrychemistry.chemical_elementMonoclonal antibodyno keywordsTumour tissuechemistryLabellingmedicineDistribution (pharmacology)InstrumentationArsenic
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A neural network clustering algorithm for the ATLAS silicon pixel detector

2014

A novel technique to identify and split clusters created by multiple charged particles in the ATLAS pixel detector using a set of artificial neural networks is presented. Such merged clusters are a common feature of tracks originating from highly energetic objects, such as jets. Neural networks are trained using Monte Carlo samples produced with a detailed detector simulation. This technique replaces the former clustering approach based on a connected component analysis and charge interpolation. The performance of the neural network splitting technique is quantified using data from proton-proton collisions at the LHC collected by the ATLAS detector in 2011 and from Monte Carlo simulations. …

Physics::Instrumentation and DetectorsCiencias FísicasMonte Carlo methodHigh Energy Physics - Experiment//purl.org/becyt/ford/1 [https]High Energy Physics - Experiment (hep-ex)jetParticle tracking detectors[PHYS.HEXP]Physics [physics]/High Energy Physics - Experiment [hep-ex]scattering [p p]Statistical physicscluster [track data analysis]Particle tracking detectors (solid-state detectors)InstrumentationQCMathematical PhysicsPhysicsArtificial neural networkAtlas (topology)Detectordetectors)Monte Carlo [numerical calculations]ATLASperformance [neural network]CERN LHC CollParticle tracking detectors (Solid-state detectors)Feature (computer vision)Physical SciencesParticle tracking detectors (Solid-stateParticle tracking detectors; Particle tracking detectors (Solid-state detectors)ComputingMethodologies_DOCUMENTANDTEXTPROCESSINGLHCConnected-component labelingAlgorithmNeural networksCIENCIAS NATURALES Y EXACTASParticle Physics - ExperimentInterpolationCiências Naturais::Ciências Físicas530 Physicssplitting:Ciências Físicas [Ciências Naturais]FOS: Physical sciencesParticle tracking detectors; Particle tracking detectors (solid-state detectors); Instrumentation; Mathematical Physics530FysikHigh Energy Physicsddc:610Cluster analysispixel [semiconductor detector]Science & TechnologyFísica//purl.org/becyt/ford/1.3 [https]High Energy Physics - Experiment; High Energy Physics - ExperimentParticle tracking detectorcluster [charged particle]AstronomíaParticle tracking detectors; Particle tracking detectors (Solid-state; detectors)Experimental High Energy Physicsimpact parameter [resolution]
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