Search results for "labeling"

showing 10 items of 372 documents

Demonstration of endogenous lectins in synovial tissue.

1991

We have recently shown that synoviocytes and extracellular matrices exhibit distinct patterns of carbohydrate expression. Their biological relevance is however not known. The purpose of the present study was to find out whether human synovial tissue would also show a specific receptor pattern for complex sugar molecules. Endogenous lectins were displayed by means of biotinylated neoglycoproteins and sulfated polysaccharides in paraffin-embedded material or cryosections. In addition to certain carbohydrate components that are known to be constituents of the carbohydrate part of cellular glycoconjugates, our panel included heparin and fucoidan, a sulfated fucose. Binding sites were shown usin…

GlycoconjugateBiopsyImmunologyReceptors Cell SurfaceBiologyFucoseArthritis Rheumatoidchemistry.chemical_compoundRheumatologyReference ValuesSynovitisLectinsOsteoarthritismedicineImmunology and AllergyHumansReceptorchemistry.chemical_classificationStaining and LabelingHistocytochemistrySynovial MembraneLectinAntibodies MonoclonalGeneral Medicinemedicine.diseasemedicine.anatomical_structureBiochemistrychemistrySynovial CellBiotinylationImmunologybiology.proteinCarbohydrate MetabolismSynovial membraneScandinavian journal of rheumatology
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A constitutively active pituitary adenylate cyclase activating polypeptide (PACAP) type I receptor shows enhanced photoaffinity labeling of its highl…

2001

Abstract In the present study, we have analyzed a previously identified constitutively active pituitary adenylate cyclase activating polypeptide (PACAP) type I (PAC1) receptor with a deletion of the single amino acid residue Glu 261 (Y.-J. Cao, G. Gimpl, F. Fahrenholz, A mutation of second intracellular loop of pituitary adenylate cyclase activating polypeptide type I receptor confers constitutive receptor activation, FEBS Lett. 469 (2000)). This glutamic acid residue is highly conserved within the second intracellular loop of class II G protein-coupled receptors and may thus be of importance for many members of this receptor class. To explore the molecular characteristics of this mutant re…

GlycosylationBiophysicsReceptors Pituitary Adenylate Cyclase-Activating PolypeptideBiochemistryCyclaseAmidohydrolasesStructural BiologyEnzyme-linked receptorAnimalsPeptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase5-HT5A receptorReceptors Pituitary HormoneReceptorMolecular BiologyCOS cellsPhotoaffinity labelingChemistryAffinity LabelsGlutamic acidMolecular biologyRatsMolecular WeightBiochemistryCOS CellsMutationSignal transductionAdenylyl CyclasesPlasmidsReceptors Pituitary Adenylate Cyclase-Activating Polypeptide Type IBiochimica et biophysica acta
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Radio Labelings of Distance Graphs

2013

A radio $k$-labeling of a connected graph $G$ is an assignment $c$ of non negative integers to the vertices of $G$ such that $$|c(x) - c(y)| \geq k+1 - d(x,y),$$ for any two vertices $x$ and $y$, $x\ne y$, where $d(x,y)$ is the distance between $x$ and $y$ in $G$. In this paper, we study radio labelings of distance graphs, i.e., graphs with the set $\Z$ of integers as vertex set and in which two distinct vertices $i, j \in \Z$ are adjacent if and only if $|i - j| \in D$.

Graph labeling05C12 05C78Edge-graceful labeling0211 other engineering and technologies0102 computer and information sciences02 engineering and technology[INFO.INFO-DM]Computer Science [cs]/Discrete Mathematics [cs.DM]01 natural sciencesCombinatoricsIndifference graphChordal graphradio k-labeling numberFOS: MathematicsDiscrete Mathematics and CombinatoricsMathematics - CombinatoricsGraph toughnessMathematicsDiscrete mathematicsResistance distanceApplied Mathematicsgraph labeling021107 urban & regional planning[ INFO.INFO-DM ] Computer Science [cs]/Discrete Mathematics [cs.DM]distance graph[INFO.INFO-DM] Computer Science [cs]/Discrete Mathematics [cs.DM]010201 computation theory & mathematicsIndependent setdistance graph.Combinatorics (math.CO)MSC 05C12 05C78Distance
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Quantifying the contribution of nitrification and denitrification to the nitrous oxide flux using 15N tracers.

2006

8 pages; International audience; Microbial transformations of nitrification and denitrification are the main sources of nitrous oxide (N2O) from soils. Relative contributions of both processes to N2O emissions were estimated on an agricultural soil using 15N isotope tracers (15NH4+ or 15NO3-), for a 10-day batch experiment. Under unsaturated and saturated conditions, both processes were significantly involved in N2O production. Under unsaturated conditions, 60% of N-N2O came from nitrification, while denitrification contributed around 85-90% under saturated conditions. Estimated nitrification rates were not significantly different whatever the soil moisture content, whereas the proportion o…

Greenhouse EffectDenitrificationHealth Toxicology and Mutagenesis[SDE.MCG]Environmental Sciences/Global ChangesNitrous OxideToxicologychemistry.chemical_compound[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/Geochemistry[ SDU.ENVI ] Sciences of the Universe [physics]/Continental interfaces environmentSoil Pollutants[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces environmentFertilizersWater contentBiotransformationHydrologyAir PollutantsMoistureBacteriaNitrogen IsotopesChemistryStable isotope ratioGeneral MedicineNitrous oxideSoil moisture content[ SDU.STU.GC ] Sciences of the Universe [physics]/Earth Sciences/GeochemistryPollutionNitrification[ SDE.MCG ] Environmental Sciences/Global Changes15N tracerEnvironmental chemistryIsotope LabelingSoil waterDenitrificationNitrificationAerationEnvironmental MonitoringEnvironmental pollution (Barking, Essex : 1987)
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20-Hydroxyecdysone-induced differentiation and apoptosis in the Drosophila cell line, l(2)mbn

2001

20-Hydroxyecdysone has an inhibitory effect on the proliferation of l(2)mbn cells, causes vacuolization and fragmentation of cells, and promotes a strong phagocytotic activity. From several lines of evidence, it can be concluded that 20-hydroxyecdysone induces apoptosis. Long-term video observations following the fate of individual cells, scanning and transmission electron microscopy reveal the typical characteristics of apoptosis: sequestration of small cellular protuberances or larger parts of the cell with nuclear fragments (apoptotic bodies), chromatin condensation, condensation and vesiculation of cytoplasm, whereas the mitochondria retain their normal appearance. The induction of apop…

HemocytesCellApoptosisBiologyIn Situ Nick-End LabelingTumor Cells CulturedmedicineAnimalsFragmentation (cell biology)TUNEL assayCell growthCell DifferentiationCell BiologyGeneral MedicineCell biologyMicroscopy ElectronEcdysteronemedicine.anatomical_structureVacuolizationCell cultureApoptosisCytoplasmVacuolesMicroscopy Electron ScanningDrosophilaSesquiterpenesCell DivisionDevelopmental BiologyTissue and Cell
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SILAC labeling coupled to shotgun proteomics analysis of membrane proteins of liver stem/hepatocyte allows to candidate the inhibition of TGF-beta pa…

2014

Background: Despite extensive research on hepatic cells precursors and their differentiated states, much remains to be learned about the mechanism underlying the self-renewal and differentiation.Results: We apply the SILAC (stable isotope labeling by amino acids in cell culture) approach to quantitatively compare the membrane proteome of the resident liver stem cells (RLSCs) and their progeny spontaneously differentiated into epithelial/hepatocyte (RLSCdH). By means of nanoLC-MALDI-TOF/TOF approach, we identified and quantified 248 membrane proteins and 57 of them were found modulated during hepatocyte differentiation. Functional clustering of differentially expressed proteins by Ingenuity …

Hepatocyte differentiationProteomicsStem cellChemistryResearchLiver Stem CellProteomicProteomicsBioinformaticsBiochemistrySILACCell biologyMembrane proteinStable isotope labeling by amino acids in cell cultureTGF beta signaling pathwayHepatocyte; Proteomics; SILAC; Stem cell; Biochemistry; Molecular Biology[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyHepatocyteStem cellShotgun proteomics[SDV.BDD]Life Sciences [q-bio]/Development BiologyMolecular BiologyProteome Science
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Inhibition of ubiquitin-dependent proteolysis by a synthetic glycine-alanine repeat peptide that mimics an inhibitory viral sequence.

2002

AbstractThe glycine–alanine repeat (GAr) of the Epstein–Barr virus nuclear antigen-1 is a cis-acting transferable element that inhibits ubiquitin/proteasome-dependent proteolysis in vitro and in vivo. We have here examined the effect of a synthetic 20-mer GAr oligopeptide on the degradation of iodinated or biotin labeled lysozyme in a rabbit reticulocyte lysates in vitro assay. Micromolar concentrations of the GA-20 peptide inhibited the hydrolysis of lysozyme without significant effect on ubiquitination. Addition of the peptide did not inhibit the hydrolysis of fluorogenic substrate by purified proteasomes and did not affect the ubiquitination of lysozyme. An excess of the peptide failed t…

Herpesvirus 4 HumanProteasome Endopeptidase ComplexGly–Ala repeatPolymersProteolysisMolecular Sequence DataBiophysicsGlycineBiotinPeptideBiochemistryIodine Radioisotopeschemistry.chemical_compoundS5aUbiquitinStructural BiologyMultienzyme ComplexesGeneticsmedicineAnimalsAmino Acid SequenceEnzyme InhibitorsMolecular BiologyPeptide sequenceUbiquitinsEpstein–Barr virus nuclear antigen-1Alaninechemistry.chemical_classificationOligopeptideAlaninebiologymedicine.diagnostic_testProteasomeMolecular MimicryUbiquitinationCell BiologyCysteine EndopeptidasesBiochemistryProteasomechemistryEpstein-Barr Virus Nuclear AntigensIsotope Labelingbiology.proteinMuramidaseRabbitsLysozymeCarrier ProteinsPeptidesOligopeptidesFEBS letters
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Unusual basement layer in the midgut of gammaridean Niphargus virei Chevreux (Crustacea, Amphipoda).

1988

The basement membrane of the midgut and posterior caeca epithelium in the gammaridean amphipod Niphargus virei Chevreux, 1896 is made of an unusual structure. This basal lamina, properly called “basal layer”, shows a dense sheet formed by a system of dense hexagonal plates connected by thin filaments. Histochemical studies and enzymatic reactions lead to the conclusion that these structures are proteinaceous, without collagenous protein, and embedded in a neutral polysaccharide matrix. The possible mechanical significance of these mesenteric structures is discussed.

HistologyAmphipodaMatrix (biology)Basement MembraneCrustaceamedicineAnimalsMolecular BiologyBasement membranebiologyStaining and LabelingHistocytochemistryProteinsMidgutCell BiologyGeneral MedicineAnatomybiology.organism_classificationCrustaceanEpitheliumMedical Laboratory TechnologyMicroscopy Electronmedicine.anatomical_structureBasal laminaCollagenAnatomyGeneral Agricultural and Biological SciencesLayer (electronics)Digestive SystemHistochemistry
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Supravital Uptake of Methylene Blue by Dendritic Cells within Stratified Squamous Epithelia: a Light and Electron Microscope Study

1996

Electron microscopic data on methylene blue staining of dendritic cells in the epithelia of the soft palate and skin of the mouse after supravital dye injection are presented. The ultra-structural details were compared with corresponding light microscopic findings. Methylene blue stained tissue was fixed by immersion in a paraformaldehyde-glutaraldehyde solution containing phosphomolybdic acid. The ensuing dye precipitate was stabilized by ammonium heptamolybdate. The light microscopic investigation revealed that selective staining of dendritic cells depended on the presence of ambient oxygen. In addition, delicate morphological characteristics, like spinous structures of the dendrites, wer…

HistologyConnective tissueEpitheliumlaw.inventionMicechemistry.chemical_compoundlawOrganellemedicineAnimalsColoring AgentsSkinParaffin EmbeddingStaining and LabelingEpithelial CellsDendritic CellsGeneral MedicineEpitheliumStainingMethylene BlueMicroscopy ElectronMedical Laboratory Technologymedicine.anatomical_structureVital stainchemistryBiochemistryCytoplasmBiophysicsPalate SoftElectron microscopeMethylene blueBiotechnic & Histochemistry
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Differential staining of mucin granules from epoxy resin sections by a phosphotungstic acid-methyl green procedure.

1991

After treatment of epoxy resin semithin sections from glutaraldehyde fixed rat large intestine with 5% aqueous phosphotungstic acid (PTA), staining with unpurified 0.2% solutions of methyl green at 60 C for 5 min produces a color differentiation between mucin granules of goblet cells. Some mucin granules and the glycocalyx appear deep green while the remaining granules, luminal mucin and collagen fibers are pink. The known contamination of unpurified methyl green with crystal violet seems to be responsible for the pink staining reaction of the latter structures, which also present an orange-red fluorescence under green exciting light. Electron microscopic observations show selective contras…

HistologyCytoplasmic Granuleslaw.inventionGlycocalyxchemistry.chemical_compoundMethyl GreenlawAnimalsPhosphotungstic acidCrystal violetIntestine LargeStaining and LabelingDifferential stainingEpoxy ResinsGastric MucinsMucinRats Inbred StrainsGeneral MedicinePhosphotungstic AcidStainingRatsMedical Laboratory TechnologyMicroscopy ElectronchemistryBiochemistryGentian VioletGlutaraldehydeElectron microscopeNuclear chemistryBiotechnichistochemistry : official publication of the Biological Stain Commission
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