Search results for "layer"

showing 10 items of 2667 documents

Self-assembly of semiflexible polymers confined to thin spherical shells

2018

Confinement effects are critical for stiff macromolecules in biological cells, vesicles, and other systems in soft matter. For these molecules, the competition between the packing entropy and the enthalpic cost of bending is further shaped by strong confinement effects. Through coarse-grained molecular dynamics simulations, we explore the self-assembly of semiflexible polymers confined in thin spherical shells for various chain lengths, chain stiffnesses, and shell thicknesses. Here, we focus on the case where the contour and persistence length of the polymers are comparable to the radius of the confining cavity. The range of ordered structures is analyzed using several order parameters to …

Models Molecularchemistry.chemical_classificationPersistence lengthMaterials scienceCondensed matter physicsPolymersMolecular Conformation02 engineering and technologyGeneral ChemistryPolymer021001 nanoscience & nanotechnologyCondensed Matter Physics01 natural sciencesSpherical shellTopological defectCondensed Matter::Soft Condensed MatterMolecular dynamicschemistryLiquid crystal0103 physical sciencesMonolayerSoft matter010306 general physics0210 nano-technologyMechanical PhenomenaSoft Matter
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Structural and Theoretical Basis for Ligand Exchange on Thiolate Monolayer Protected Gold Nanoclusters

2012

Ligand exchange reactions are widely used for imparting new functionality on or integrating nanoparticles into devices. Thiolate-for-thiolate ligand exchange in monolayer protected gold nanoclusters has been used for over a decade; however, a firm structural basis of this reaction has been lacking. Herein, we present the first single-crystal X-ray structure of a partially exchanged Au(102)(p-MBA)(40)(p-BBT)(4) (p-MBA = para-mercaptobenzoic acid, p-BBT = para-bromobenzene thiol) with p-BBT as the incoming ligand. The crystal structure shows that 2 of the 22 symmetry-unique p-MBA ligand sites are partially exchanged to p-BBT under the initial fast kinetics in a 5 min timescale exchange reacti…

Models Molecularchemistry.chemical_classificationta114LigandMetal NanoparticlesBridging ligandGeneral ChemistryAssociative substitutionCrystal structureCrystallography X-RayLigandsBiochemistryArticleCatalysisNanoclustersCrystallographyColloid and Surface ChemistrychemistryMonolayerSolventsThiolThermodynamicsDensity functional theoryGoldJournal of the American Chemical Society
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The impact of model peptides on structural and dynamic properties of egg yolk lecithin liposomes - experimental and DFT studies.

2015

Electron spin resonance (ESR), 1H-NMR, voltage and resistance experiments were performed to explore structural and dynamic changes of Egg Yolk Lecithin (EYL) bilayer upon addition of model peptides. Two of them are phenylalanine (Phe) derivatives, Ac-Phe-NHMe (1) and Ac-Phe-NMe2 (2), and the third one, Ac-(Z)-ΔPhe-NMe2 (3), is a derivative of (Z)-α,β-dehydrophenylalanine. The ESR results revealed that all compounds reduced the fluidity of liposome's membrane, and the highest activity was observed for compound 2 with N-methylated C-terminal amide bond (Ac-Phe-NMe2). This compound, being the most hydrophobic, penetrates easily through biological membranes. This was also observed in voltage an…

Models Molecularfood.ingredientBioengineeringBiochemistryLecithinlaw.inventionfoodlawLecithinsOrganic chemistryPeptide bondElectron paramagnetic resonanceMolecular BiologyLiposomeMolecular StructureChemistryBilayerBiological membraneGeneral ChemistryGeneral MedicineNuclear magnetic resonance spectroscopyEgg YolkCrystallographyMembraneLiposomesMolecular MedicineQuantum TheoryThermodynamicsPeptidesChemistrybiodiversity
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Effect of tin and lead chlorotriphenyl analogues on selected living cells.

2010

Three kinds of living cells, human embryonic kidney cells, Saccharomyces cerevisiae, and Escherichia coli, were tested for their sensitivity to chlorotriphenyltin and chlorotriphenyllead. The tin compound proved definitely more toxic than the lead derivative, particularly in the case of the human embryonic kidney cells devoid of any protective cell wall. Electron paramagnetic resonance (EPR) comparative studies carried out by using a natural model liposome system (egg yolk lecithin) confirmed considerable changes within the lipid bilayer upon doping by the aforementioned additives, which may be crucial to the mechanism of the observed cell cleavage. The individual dopants revealed diverse i…

Models Molecularfood.ingredientCell SurvivalHealth Toxicology and MutagenesisCellMolecular Conformationchemistry.chemical_elementSaccharomyces cerevisiaeToxicologyCleavage (embryo)BiochemistryLecithinCell wallfoodLecithinsmedicineEscherichia coliOrganometallic CompoundsOrganotin CompoundsHumansChlorotriphenyltinLipid bilayerMolecular BiologyLiposomeElectron Spin Resonance SpectroscopyGeneral MedicineYeastChlorotriphenylleadElectron Paramagnetic Resonancemedicine.anatomical_structureMembraneHEK293 CellsBiochemistrychemistryLeadHuman Embryonic Kidney CellsLiposomesMolecular MedicineTinJournal of biochemical and molecular toxicology
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Formation of irreversibly bound annexin A1 protein domains on POPC/POPS solid supported membranes

2008

AbstractThe specific interaction of annexin A1 with phospholipid bilayers is scrutinized by means of scanning force and fluorescence microscopy, quartz crystal microbalance, ellipsometry, and modeled by dynamic Monte Carlo simulations. It was found that POPC/POPS bilayers exhibit phase separation in POPC- and POPS-enriched domains as a function of Ca2+ concentration. Annexin A1 interacts with POPC/POPS bilayers by forming irreversibly bound protein domains with monolayer thickness on POPS-enriched nanodomains, while the attachment of proteins to the POPC-enriched regions is fully reversible. A thorough kinetic analysis of the process reveals that both, the binding constant of annexin A1 at …

Models Moleculargenetic structuresLipid BilayersBiophysicsPhospholipidAnalytical chemistryPhosphatidylserines02 engineering and technologyMicroscopy Atomic ForceBiochemistryBiophysical PhenomenaMembrane Lipids03 medical and health scienceschemistry.chemical_compoundProtein structureSFMMonolayerMicropatterned membranesAnimalsHumansPOPCMonte Carlo simulationAnnexin A1030304 developmental biologyFluorescence microscopy0303 health sciencesEllipsometrytechnology industry and agricultureCell BiologyQuartz crystal microbalanceSurface Plasmon Resonance021001 nanoscience & nanotechnologyBinding constantProtein Structure TertiaryMembraneMicroscopy FluorescencechemistryQCMPhosphatidylcholinesBiophysicsCalciumlipids (amino acids peptides and proteins)Adsorption0210 nano-technologyMonte Carlo MethodProtein BindingAnnexin A1Biochimica et Biophysica Acta (BBA) - Biomembranes
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Mechanistic analysis and experimental verification of bicarbonate-controlled enteric coat dissolution: Potential in vivo implications

2019

Enteric coatings have shown in vivo dissolution rates that are poorly predicted by traditional in vitro tests, with the in vivo dissolution being considerably slower than in vitro. To provide a more mechanistic understanding of this, the dependence of the release properties of various enteric-coated (EC) products on bulk pH and bicarbonate molarity was investigated. It was found that, at presumably in vivo-relevant values, the bicarbonate molarity is a more significant determinant of the dissolution profile than the bulk pH. The findings also indicate that this steep relationship between the dissolution of enteric coatings and bicarbonate molarity limits those coatings' performance in vivo.…

Molar concentrationChemistry PharmaceuticalBicarbonateInorganic chemistryKineticsPharmaceutical ScienceCapsules02 engineering and technologyBuffers030226 pharmacology & pharmacyExcipientsDiffusion layer03 medical and health scienceschemistry.chemical_compoundHypromellose Derivatives0302 clinical medicineIntestine SmallmedicineHumansIntestinal MucosaMesalamineDissolutionAcetaminophenCarbonic acidGeneral MedicineHydrogen-Ion Concentration021001 nanoscience & nanotechnologyEnteric coatingBicarbonatesDrug LiberationModels ChemicalSolubilitychemistryCarbon dioxide0210 nano-technologyBiotechnologymedicine.drugEuropean Journal of Pharmaceutics and Biopharmaceutics
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Effect of rotary cutting instruments on the resin-tooth interfacial ultra structure: An in vivo study

2013

Objectives: To evaluate the effect of cutting teeth with different types of burs at various speeds on surface topogra - phy of tooth surface and interfacial gap formation at resin-tooth interface. Material and Methods: The human molars were divided into seven groups: Diamond bur in airrotor (DA) & mi - cromotor (DM), crosscut carbide bur in airrotor (CCA) & micromotor (CCM), plain carbide bur in airrotor (CA) & micromotor (CM) and #600-grit silicon carbide paper (SiC). In five samples from each group Class II box-only cavities were restored. The occlusal surface of four teeth per group was flattened. Two out of four teeth were acid etched. Teeth were subjected for scanning electron microsco…

MolarMaterials scienceScanning electron microscopeSmear layerDentistryOdontologíaengineering.materialEndodonticsCarbidechemistry.chemical_compoundstomatognathic systemSilicon carbideComposite materialGeneral Dentistrybusiness.industryResearchTooth surfaceDiamond:CIENCIAS MÉDICAS [UNESCO]Ciencias de la saludAmorphous solidstomatognathic diseaseschemistryUNESCO::CIENCIAS MÉDICASengineeringbusinessJournal of Clinical and Experimental Dentistry
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Ultrastructural patterns of human dentinal tubules, odontoblasts processes and nerve fibres.

2005

The structure of the dentin, consists of the following elements: the odontoblastic processes, dentinal tubules and their periodontoblastic spaces. The odontoblasts are aligned in a single layer in the periphery of the dental pulp and secrete the organic components of dentin. The vitality of dentin is mediated too by the nerve fibres. The ultrastructure of the trigeminal sensory nerves in dentin, especially in relation to odontoblasts remains to be clarified. We studied the third molars and young premolars. The specimens were fixed in glutaraldehyde immediately after extraction. Our investigations give evidence to prove that the distribution of the dentinary tubules is homogeneous, containin…

MolarPathologymedicine.medical_specialtyAdolescentBiologyNerve Fibersstomatognathic systemMicroscopy Electron TransmissionmedicineDentinHumansBicuspidOdontoblastsCell BiologyGeneral MedicineAnatomystomatognathic diseasesMicroscopy ElectronOdontoblastDentinal Tubulemedicine.anatomical_structureHomogeneousDentinUltrastructurePulp (tooth)Molar ThirdSingle layerDevelopmental BiologyTissuecell
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Ultramorphology and dentine permeability changes induced by prophylactic procedures on exposed dentinal tubules in middle dentine

2010

Objectives: The purpose of this study was to evaluate the changes in dentinal permeability (i.e. hydraulic conductance) after prophylactic treatments performed using prophy-powders with air-polishing system or prophy-pastes on exposed middle dentine. The changes in dentine morphology were evaluated by SEM. Study design: Commercial prophylactic pastes and air-polishing powders were tested in this study. Dentine discs from human third molars were used to study the quantitative reduction of the dentine permeability under simulated pulpal pressure (20 cm H 2O). Further specimens were gold-coated and analysed using observed a SEM. Results: The results of this study showed different dentine perme…

MolarSmear layerDentistryIn Vitro Techniqueslaw.inventionstomatognathic systemlawDentine permeabilityDentinmedicineDentifriceHumansGeneral Dentistrybusiness.industryChemistryDental Prophylaxis:CIENCIAS MÉDICAS [UNESCO]Dentin Permeabilitystomatognathic diseasesDentinal Tubulemedicine.anatomical_structureOtorhinolaryngologyPermeability (electromagnetism)Bioactive glassDentinUNESCO::CIENCIAS MÉDICASMicroscopy Electron ScanningSurgerybusiness
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Molecular Dynamic Simulation on Polyamide6/Graphene nano-layers nanocomposites

2016

In this work results obtained from Molecular Dynamic Simulation (MDS) on Polyamide 6 (PA6) chains in graphene containing nanocomposites are presented. Through detailed MDS, the interface of complex nanocomposites systems can be fully characterized, furthermore different physical properties, such as density, end-to-end distance , and average radius of gyration of polymers chains can be predicted. This issue is useful for the design of highly value-added nanocomposites and the optimization of their production process, by defining transformation steps and status variables (temperature, time and pressure), that can also help the industrial production.

Molecular Dynamic Simulation Polyamide6 Graphene nano-layers nanocomposites
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