Search results for "lcsh:Science"

showing 10 items of 2187 documents

Long-Distance Travellers: Phylogeography of a Generalist Parasite, Pholeter gastrophilus, from Cetaceans

2017

We studied the phylogeography and historical demography of the most generalist digenean from cetaceans, Pholeter gastrophilus, exploring the effects of isolation by distance, ecological barriers and hosts' dispersal ability on the population structure of this parasite. The ITS2 rDNA, and the mitochondrial COI and ND1 from 68 individual parasites were analysed. Worms were collected from seven oceanic and coastal cetacean species from the south western Atlantic (SWA), central eastern Atlantic, north eastern Atlantic (NEA), and Mediterranean Sea. Pholeter gastrophilus was considered a single lineage because reciprocal monophyly was not detected in the ML cladogram of all individuals, and seque…

0106 biological sciences0301 basic medicineHeredityTroglotrematidaePopulation Dynamicslcsh:MedicinePopulation geneticsMarine and Aquatic SciencesPathogenesisGeneralist and specialist speciesPathology and Laboratory Medicine01 natural sciencesMonophylyDatabase and Informatics MethodsOceansMedicine and Health Scienceslcsh:ScienceAtlantic OceanMammalseducation.field_of_studyLikelihood FunctionsMultidisciplinaryGeographyReproductive isolationDNA HelminthPhylogeographyGenetic MappingBiogeographyVertebratesHost-Pathogen InteractionsSequence AnalysisResearch ArticleReproductive IsolationBioinformaticsGenetic SpeciationDolphinsPopulationZoologyMarine BiologyBiologyResearch and Analysis Methods010603 evolutionary biology03 medical and health sciencesBodies of waterGeneticsMediterranean SeaAnimalseducationMarine MammalsIsolation by distanceDemographyEvolutionary BiologyAnalysis of VariancePopulation BiologyPilot Whaleslcsh:REcology and Environmental SciencesOrganismsWhalesBiology and Life SciencesGenetic VariationSequence Analysis DNAPhylogeography030104 developmental biologyHaplotypesAmniotesEarth SciencesBiological dispersallcsh:QCetaceaPopulation GeneticsPLoS ONE
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High and uneven levels of 45S rDNA site-number variation across wild populations of a diploid plant genus (Anacyclus, Asteraceae)

2017

The nuclear genome harbours hundreds to several thousand copies of ribosomal DNA. Despite their essential role in cellular ribogenesis few studies have addressed intrapopulation, interpopulation and interspecific levels of rDNA variability in wild plants. Some studies have assessed the extent of rDNA variation at the sequence and copy-number level with large sampling in several species. However, comparable studies on rDNA site number variation in plants, assessed with extensive hierarchical sampling at several levels (individuals, populations, species) are lacking. In exploring the possible causes for ribosomal loci dynamism, we have used the diploid genus Anacyclus (Asteraceae) as a suitab…

0106 biological sciences0301 basic medicineHereditylcsh:MedicineAsteraceae01 natural sciencesGenuslcsh:ScienceAnacyclusIn Situ Hybridization FluorescenceFlowering PlantsHeterozygosityMultidisciplinarybiologyChromosome BiologyEukaryotaPlantsKaryotypesPloidyResearch ArticleChromosome Structure and FunctionEvolutionary ProcessesContext (language use)DNA RibosomalChromosomes PlantChromosomesPolyploidyAnacyclusCytogenetics03 medical and health sciencesPolyploidBotanyGenetic variationGeneticsHybridizationRibosomal DNAEvolutionary Biologylcsh:ROrganismsGenetic VariationBiology and Life SciencesCell BiologyRibosomal RNAbiology.organism_classificationDiploidy030104 developmental biologyRNA RibosomalGenetic LociEvolutionary biologyKaryotypinglcsh:QDepartures from Diploidy010606 plant biology & botanyPLOS ONE
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Novel mutations in the voltage-gated sodium channel of pyrethroid-resistant Varroa destructor populations from the Southeastern USA

2016

The parasitic mite Varroa destructor has a significant worldwide impact on bee colony health. In the absence of control measures, parasitized colonies invariably collapse within 3 years. The synthetic pyrethroids tau-fluvalinate and flumethrin have proven very effective at managing this mite within apiaries, but intensive control programs based mainly on one active ingredient have led to many reports of pyrethroid resistance. In Europe, a modification of leucine to valine at position 925 (L925V) of the V. destructor voltage-gated sodium channel was correlated with resistance, the mutation being found at high frequency exclusively in hives with a recent history of pyrethroid treatment. Here,…

0106 biological sciences0301 basic medicineInsecticidesVeterinary medicineGene Identification and Analysislcsh:MedicineMicrobiologiaVoltage-Gated Sodium ChannelsFlumethrinmedicine.disease_causeBiochemistry01 natural sciencesAbellesInsecticide Resistancechemistry.chemical_compoundMethioninePyrethrinsÀcarsDestructorAmino Acidslcsh:ScienceMitesMutationMultidisciplinaryPyrethroidbiologyOrganic CompoundsGeneral MedicineBeesSoutheastern United StatesInsectsChemistryPhysical SciencesInsect ProteinsGeneral Agricultural and Biological SciencesResearch ArticleArthropodaApiaryParàsitsVarroidaeGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesLeucineparasitic diseasesGeneticsMitemedicineAnimalsPoint MutationSulfur Containing Amino AcidsIsoleucineMutation DetectionAllelesbusiness.industryPoint mutationOrganic Chemistrylcsh:ROrganismsChemical CompoundsBiology and Life SciencesProteinsbiology.organism_classificationInvertebratesHymenopteraBiotechnology010602 entomology030104 developmental biologyAliphatic Amino AcidschemistryGenetic LociVarroa destructorMutationlcsh:Qbusiness
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Co-infection with iflaviruses influences the insecticidal properties of Spodoptera exigua multiple nucleopolyhedrovirus occlusion bodies: Implication…

2017

Biological insecticides based on Spodoptera exigua multiple nucleopolyhedrovirus (SeMNPV) can efficiently control S. exigua larvae on field and greenhouse crops in many parts of the world. Spanish wild populations and laboratory colonies of S. exigua are infected by two iflaviruses (SeIV-1 and SeIV-2). Here we evaluated the effect of iflavirus co-infection on the insecticidal characteristics of SeMNPV occlusion bodies (OBs). Overall, iflavirus co-inoculation consistently reduced median lethal concentrations (LC50) for SeMNPV OBs compared to larvae infected with SeMNPV alone. However, the speed of kill of SeMNPV was similar in the presence or absence of the iflaviruses. A reduction of the we…

0106 biological sciences0301 basic medicineLife CyclesInsecticidesPhysiologyBiosecuritySeMNPV occlusion bodieslcsh:MedicineInsectPathogenesisPathology and Laboratory MedicineWeight Gain01 natural sciencesIflavirus co-infectionLarvaeInvertebrate GenomicsMedicine and Health Scienceslcsh:Sciencemedia_commonLarvaMultidisciplinaryCoinfectionAgricultureGenomicsInsectsPhysiological ParametersAgrochemicalsResearch ArticleArthropodamedia_common.quotation_subjectBiologySpodopteraSpodopteraMicrobiologyLepidoptera genitalia03 medical and health sciencesExtraction techniquesExiguaGeneticsAnimalsPest Control BiologicalBiological InsecticidesInoculationlcsh:RfungiBody WeightOrganismsBiology and Life SciencesPesticidebiology.organism_classificationInvertebratesRNA extractionNucleopolyhedrovirusesResearch and analysis methods010602 entomology030104 developmental biologyBiological insecticidesAnimal Genomicslcsh:QDevelopmental BiologyPLoS ONE
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Transcriptomic responses to biotic stresses in Malus x domestica: a meta-analysis study.

2017

AbstractRNA-Seq analysis is a strong tool to gain insight into the molecular responses to biotic stresses in plants. The objective of this work is to identify specific and common molecular responses between different transcriptomic data related to fungi, virus and bacteria attacks in Malus x domestica. We analyzed seven transcriptomic datasets in Malus x domestica divided in responses to fungal pathogens, virus (Apple Stem Grooving Virus) and bacteria (Erwinia amylovora). Data were dissected using an integrated approach of pathway- and gene- set enrichment analysis, Mapman visualization tool, gene ontology analysis and inferred protein-protein interaction network. Our meta-analysis revealed…

0106 biological sciences0301 basic medicineMalusKnowledge BasesArabidopsislcsh:MedicineSecondary MetabolismErwiniaGenes Plant01 natural sciencesArticleTranscriptome03 medical and health sciencesPlant Growth RegulatorsGene Expression Regulation PlantStress PhysiologicalSettore AGR/07 - Genetica AgrariaProtein Interaction Mapslcsh:ScienceSecondary metabolismGeneCrosses GeneticPlant ProteinsGeneticsMultidisciplinarybiologyGene Expression Profilinglcsh:RfungiMalus transcriptomic biotic stressfood and beveragesBiotic stressbiology.organism_classificationSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeGene expression profiling030104 developmental biologyGene OntologyMalustranscriptomic responses biotic stress meta-analysis RNA-seq plantsInactivation Metaboliclcsh:QTranscriptomeApple stem grooving virus010606 plant biology & botanyTranscription FactorsScientific reports
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The role of the Strait of Gibraltar in shaping the genetic structure of the Mediterranean Grenadier, Coryphaenoides mediterraneus, between the Atlant…

2017

24 pages, 4 figures, 4 tables, supplementary information https://dx.doi.org/10.1371/journal.pone.0174988.-- Data Availability: The mtDNA COI sequences can be accessed at BOLD systems through the sample ID: ME-9911; ME-11972; ME-13727; GLF011. New mtDNA COI sequences can be accessed at GenBank by the accession numbers KY345206 - KY345398. GenBank accession numbers for close related species of C. mediterraneus are: Coryphaenoides striaturus - KX656427.1, KX656428.1; Coryphaenoides murray - KX656411.1, KX656410.1; Coryphaenoides carapinus - KX656382.1, KX656381.1; Coryphaenoides brevibarbis - KX656377.1, KX656376.1, KX656375.1. An alignment in fasta with all the haplotypes and respective frequ…

0106 biological sciences0301 basic medicineMediterranean climateLife CyclesHeredityPopulation geneticslcsh:MedicineArtificial Gene Amplification and ExtensionBiochemistryPolymerase Chain Reaction01 natural sciencesBathyal zoneLarvaeMediterranean sealcsh:ScienceAtlantic OceanPrincipal Component Analysiseducation.field_of_studyMultidisciplinaryGeographyMitochondrial DNANucleic acidsGenetic MappingGenetic structureResearch ArticleFish ProteinsGene FlowForms of DNAPopulationZoologyBiologyResearch and Analysis MethodsModels Biological010603 evolutionary biologyElectron Transport Complex IVEvolution Molecular03 medical and health sciencesMediterranean SeaGeneticsAnimalsComputer Simulation14. Life underwaterMolecular Biology TechniqueseducationMolecular BiologyGibraltarEvolutionary BiologyPopulation Biologylcsh:RGenetic VariationBiology and Life SciencesPaleontologyBayes TheoremDNAGenetic divergenceGadiformes030104 developmental biologyHaplotypesGenetic LociEarth SciencesBiological dispersallcsh:QPaleogeneticsPopulation GeneticsMicrosatellite RepeatsDevelopmental BiologyPLoS ONE
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Response to formal comment on Myhrvold (2016) submitted by Griebeler and Werner (2017)

2018

In his 2016 paper, Myhrvold criticized ours from 2014 on maximum growth rates (Gmax, maximum gain in body mass observed within a time unit throughout an individual’s ontogeny) and thermoregulation strategies (ectothermy, endothermy) of 17 dinosaurs. In our paper, we showed that Gmax values of similar-sized extant ectothermic and endothermic vertebrates overlap. This strongly questions a correct assignment of a thermoregulation strategy to a dinosaur only based on its Gmax and (adult) body mass (M). Contrary, Gmax separated similar-sized extant reptiles and birds (Sauropsida) and Gmax values of our studied dinosaurs were similar to those seen in extant similar-sized (if necessary scaled-up) …

0106 biological sciences0301 basic medicineMetabolic AnalysisPhysiologylcsh:MedicineAnimal Phylogenetics01 natural sciencesDinosaursBody TemperatureExtant taxonOrnithologyMaximum gainMedicine and Health SciencesGrowth rateSauropsidalcsh:ScienceArchosauriaData ManagementMammalsMultidisciplinarybiologyVertebrateEukaryotaPrehistoric AnimalsThermoregulationPhylogeneticsBioassays and Physiological AnalysisPhysiological ParametersEctothermVertebratesRegression AnalysisComputer and Information SciencesVertebrate PaleontologyZoologyResearch and Analysis Methods010603 evolutionary biologyFormal CommentBirds03 medical and health sciencesbiology.animalBasal Metabolic Rate MeasurementAnimalsAnimal PhysiologyEvolutionary SystematicsPaleozoologyTaxonomyEvolutionary Biologylcsh:ROrganismsBiology and Life SciencesPaleontologyReptilesbiology.organism_classificationBird Physiology030104 developmental biologyAmniotesEarth Scienceslcsh:QAllometryPaleobiologyZoologyPLoS ONE
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Dinosaur Metabolism and the Allometry of Maximum Growth Rate

2016

In his 2016 paper, Myhrvold criticized ours from 2014 on maximum growth rates (Gmax, maximum gain in body mass observed within a time unit throughout an individual’s ontogeny) and thermoregulation strategies (ectothermy, endothermy) of 17 dinosaurs. In our paper, we showed that Gmax values of similar-sized extant ectothermic and endothermic vertebrates overlap. This strongly questions a correct assignment of a thermoregulation strategy to a dinosaur only based on its Gmax and (adult) body mass (M). Contrary, Gmax separated similar-sized extant reptiles and birds (Sauropsida) and Gmax values of our studied dinosaurs were similar to those seen in extant similar-sized (if necessary scaled-up) …

0106 biological sciences0301 basic medicineMetabolic stateMetabolic AnalysisPhysiologylcsh:MedicineAnimal Phylogenetics01 natural sciencesBody TemperatureDinosaursMathematical and Statistical TechniquesExtant taxonMedicine and Health SciencesBody SizeGrowth ratelcsh:Sciencemedia_commonArchosauriaData ManagementMammalsMultidisciplinaryEcologyFossilsEukaryotaRegression analysisPrehistoric AnimalshumanitiesCurve FittingPhylogeneticsBioassays and Physiological AnalysisPhysiological ParametersEctothermPhysical SciencesVertebratesRegression AnalysisStatistics (Mathematics)Research ArticleComputer and Information Sciencesmedia_common.quotation_subjectVertebrate PaleontologyBiologyResearch and Analysis Methods010603 evolutionary biologyMarsupialsFormal CommentBirds03 medical and health sciencesBasal Metabolic Rate MeasurementAnimalsEvolutionary SystematicsStatistical MethodsPaleozoologyTaxonomyEvolutionary BiologyVariableslcsh:ROrganismsReptilesBiology and Life SciencesPaleontology030104 developmental biologyEvolutionary biologyBasal metabolic rateAmniotesEarth Scienceslcsh:QAllometryPaleobiologyEnergy MetabolismZoologyMathematical FunctionsMathematicsPLoS ONE
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Fungal spore diversity reflects substrate-specific deposition challenges

2018

AbstractSexual spores are important for the dispersal and population dynamics of fungi. They show remarkable morphological diversity, but the underlying forces driving spore evolution are poorly known. We investigated whether trophic status and substrate associations are associated with morphology in 787 macrofungal genera. We show that both spore size and ornamentation are associated with trophic specialization, so that large and ornamented spores are more probable in ectomycorrhizal than in saprotrophic genera. This suggests that spore ornamentation facilitates attachment to arthropod vectors, which ectomycorrhizal species may need to reach lower soil layers. Elongated spore shapes are mo…

0106 biological sciences0301 basic medicinePopulationPopulation Dynamicslcsh:MedicineMorphology (biology)Biology010603 evolutionary biology01 natural sciencesArticle03 medical and health sciencesmorfologiaAscomycotaMycorrhizaelcsh:ScienceeducationSoil MicrobiologyTrophic levelitiöteducation.field_of_studyMultidisciplinaryEcologyBasidiomycotalcsh:Rfungisubstrate-specific deposition challengesSpores FungalSubstrate (marine biology)Spore030104 developmental biologyTaxonBiological dispersalfungal spore diversitylcsh:QsienetSoil microbiologyleviäminen
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Arbuscular mycorrhizal symbiosis mitigates the negative effects of salinity on durum wheat

2017

Arbuscular mycorrhizal (AM) symbiosis is generally considered to be effective in ameliorating the plant tolerance to salt stress. Unfortunately, the comprehension of the mechanisms implicated in salinity stress alleviation by AM symbiosis is far from being complete. Thus, an experiment was performed by growing durum wheat (Triticum durum Desf.) plants under salt-stress conditions to evaluate the influence of AM symbiosis on both the plant growth and the regulation of a number of genes related to salt stress and nutrient uptake. Durum wheat plants were grown outdoors in pots in absence or in presence of salt stress and with or without AM fungi inoculation. The inoculum consisted of a mixture…

0106 biological sciences0301 basic medicineRhizophagus irregularisSalinityLeavesGene Expressionlcsh:MedicinePlant SciencePlant RootsPolymerase Chain ReactionPhysical Chemistry01 natural sciencesNutrientMycorrhizaePlant Resistance to Abiotic Stresslcsh:ScienceTriticumBiomass (ecology)MultidisciplinaryEcologyPlant Anatomyfood and beveragesSalt TolerancePlantsSettore AGR/02 - Agronomia E Coltivazioni ErbaceeChemistryPlant PhysiologyPhysical SciencesWheatSymbiosiResearch ArticleBiology03 medical and health sciencesSymbiosisSettore AGR/07 - Genetica AgrariaPlant-Environment InteractionsBotanyGeneticsPlant DefensesGene RegulationGrassesSymbiosisBiochemistry Genetics and Molecular Biology (all)InoculationGene Expression ProfilingPlant EcologyEcology and Environmental Scienceslcsh:RfungiOrganismsFungiBiology and Life SciencesPlant RootPlant Pathologybiology.organism_classificationSporeSalinitySpecies Interactions030104 developmental biologyAgricultural and Biological Sciences (all)Chemical PropertiesArbuscular mycorrhizal symbiosislcsh:QSalt-Tolerance010606 plant biology & botanyPLOS ONE
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