Search results for "likelihood"
showing 10 items of 264 documents
Prior-based Bayesian information criterion
2019
We present a new approach to model selection and Bayes factor determination, based on Laplace expansions (as in BIC), which we call Prior-based Bayes Information Criterion (PBIC). In this approach, the Laplace expansion is only done with the likelihood function, and then a suitable prior distribution is chosen to allow exact computation of the (approximate) marginal likelihood arising from the Laplace approximation and the prior. The result is a closed-form expression similar to BIC, but now involves a term arising from the prior distribution (which BIC ignores) and also incorporates the idea that different parameters can have different effective sample sizes (whereas BIC only allows one ov…
Multitype spatial point patterns with hierarchical interactions.
2001
Multitype spatial point patterns with hierarchical interactions are considered. Here hierarchical interaction means directionality: points on a higher level of hierarchy affect the locations of points on the lower levels, but not vice versa. Such relations are common, for example, in ecological communities. Interacting point patterns are often modeled by Gibbs processes with pairwise interactions. However, these models are inherently symmetric, and the hierarchy can be acknowledged only when interpreting the results. We suggest the following in allowing the inclusion of the hierarchical structure in the model. Instead of regarding the pattern as a realization of a stationary multivariate po…
Generalized Symmetry Models for Hypercubic Concordance Tables
2000
Summary Frequency data obtained classifying a sample of 'units' by the same categorical variable repeatedly over 'components', can be arranged in a hypercubic concordance table (h.c.t.). This kind of data naturally arises in a number of different areas such as longitudinal studies, studies using matched and clustered data, item-response analysis, agreement analysis. In spite of the substantial diversity of the mechanisms that can generate them, data arranged in a h.c.t. can all be analyzed via models of symmetry and quasi-symmetry, which exploit the special structure of the h.c.t. The paper extends the definition of such models to any dimension, introducing the class of generalized symmetry…
Forward likelihood-based predictive approach for space-time point processes
2011
Dealing with data from a space–time point process, the estimation of the conditional intensity function is a crucial issue even if a complete definition of a parametric model is not available. In particular, in case of exploratory contexts or if we want to assess the adequacy of a specific parametric model, some kind of nonparametric estimation procedure could be useful. Often, for these purposes kernel estimators are used and the estimation of the intensity function depends on the estimation of bandwidth parameters. In some fields, like for instance the seismological one, predictive properties of the estimated intensity function are pursued. Since a direct ML approach cannot be used, we pr…
Boolean Models: Maximum Likelihood Estimation from Circular Clumps
1990
This paper deals with the problem of making inferences on the maximum radius and the intensity of the Poisson point process associated to a Boolean Model of circular primary grains with uniformly distributed random radii. The only sample information used is observed radii of circular clumps (DUPAC, 1980). The behaviour of maximum likelihood estimation has been evaluated by means of Monte Carlo methods.
Sample Size Requirements of a Mixture Analysis Method with Applications in Systematic Biology
1999
The available information on sample size requirements of mixture analysis methods is insufficient to permit a precise evaluation of the potential problems facing practical applications of mixture analysis. We use results from Monte Carlo simulation to assess the sample size requirements of a simple mixture analysis method under conditions relevant to biological applications of mixture analysis. The mixture model used includes two univariate normal components with equal variances but assumes that the researcher is ignorant as to the equality of the variances. The method used relies on the EM algorithm to compute the maximum likelihood estimates of the mixture parameters, and the likelihood r…
Comprehensive estimation of input signals and dynamics in biochemical reaction networks
2012
Abstract Motivation: Cellular information processing can be described mathematically using differential equations. Often, external stimulation of cells by compounds such as drugs or hormones leading to activation has to be considered. Mathematically, the stimulus is represented by a time-dependent input function. Parameters such as rate constants of the molecular interactions are often unknown and need to be estimated from experimental data, e.g. by maximum likelihood estimation. For this purpose, the input function has to be defined for all times of the integration interval. This is usually achieved by approximating the input by interpolation or smoothing of the measured data. This procedu…
Segmented mixed models with random changepoints: a maximum likelihood approach with application to treatment for depression study
2014
We present a simple and effective iterative procedure to estimate segmented mixed models in a likelihood based framework. Random effects and covariates are allowed for each model parameter, including the changepoint. The method is practical and avoids the computational burdens related to estimation of nonlinear mixed effects models. A conventional linear mixed model with proper covariates that account for the changepoints is the key to our estimating algorithm. We illustrate the method via simulations and using data from a randomized clinical trial focused on change in depressive symptoms over time which characteristically show two separate phases of change.
Windowed Etas Models With Application To The Chilean Seismic Catalogs
2015
Abstract The seismicity in Chile is estimated using an ETAS (Epidemic Type Aftershock sequences) space–time point process through a semi-parametric technique to account for the estimation of parametric and nonparametric components simultaneously. The two components account for triggered and background seismicity respectively, and are estimated by alternating a ML estimation for the parametric part and a forward predictive likelihood technique for the nonparametric one. Given the geographic and seismological characteristics of Chile, the sensitivity of the technique with respect to different geographical areas is examined in overlapping successive windows with varying latitude. A different b…
An approximation to maximum likelihood estimates in reduced models
1990
SUMMARY An approximation to the maximum likelihood estimates of the parameters in a model can be obtained from the corresponding estimates and information matrices in an extended model, i.e. a model with additional parameters. The approximation is close provided that the data are consistent with the first model. Applications are described to log linear models for discrete data, to models for multivariate normal distributions with special covariance matrices and to mixed discrete-continuous models.