Search results for "lineage"
showing 10 items of 331 documents
Phenolic metabolites from 5,000-year-old coprolites of Myotragus balearicus, an extinct insular bovid
2020
Abstract To date, the identification of polyphenols in the archaeological and palaeontological record has been limited. Here, we demonstrate for the first time the presence of flavonoid and phenolic metabolites from non-mineralised coprolites belonging to a non-human mammal species. Myotragus balearicus is the last species of a bovid lineage that became extinct during the Holocene in the western Mediterranean basin. In this work, we characterize the phenolic metabolites of M. balearicus coprolites for the first time. The chemical analysis of coprolites revealed the presence of flavonoids, such as flavones and flavonols. Moreover, the detection of conjugates of hydroxyphenylvaleric, hydroxyp…
Biogeography of the smooth snake (Coronella austriaca): origin and conservation of the northernmost population
2014
Understanding historical range expansions and population demography can be crucial for the conservation and management of endangered species. In doing so, valuable information can be obtained regarding, for example, the identification of isolated populations, associations to particular habitats and distribution range shifts. As poikilotherms, snakes are vulnerable to environmental changes that can greatly shape their distribution ranges. Here we used mitochondrial data to elucidate the origin of the smooth snake population in Aland island, which is the northernmost location where the species is found. In Aland, we used mitochondrial and microsatellite data to fine-map its spatial genetic st…
The phylogeny and biogeography of Gentiana L. sect. Ciminalis (Adans.) Dumort.: A historical interpretation of distribution ranges in the European hi…
1998
Abstract Gentiana sect. Ciminalis consists of seven mostly ecologically or geographically vicariant and closely related species which are distributed throughout the South and Central European high mountains. The analysis of a RAPD data set and trn L-intron and ITS sequences resulted in slightly different phylogenetic hypotheses. In the preferred hypothesis the group consists of two completely resolved main lineages: 1) G. clusii and G. alpina. 2) G. dinarica, G. acaulis, G. ligustica, G. angustifolia and G. occidentalis. The most important conclusions we have drawn from this phylogenetic hypothesis and from the observed patterns of molecular variation are: 1) The calcifuge ecology of G. aca…
A new approach to the Late Miocene-Early Pliocene forms of the genus Apocricetus. Apocricetus alberti (Rodentia, Mammalia) from Venta del Moro (Cabri…
2014
Abstract The species of the genus Apocricetus are considered to form the phyletic lineage A. aff. plinii (MN11)– A. plinii – A. alberti – A. barrierei – A. angustidens (MN16). Along this lineage, gradual morphological and biometrical changes occur, but not all the species are represented by rich populations. The assemblage of Apocricetus alberti from Venta del Moro is by far the most abundant collection of this species. This population shows a great morphological variability in some characters like the morphology of the anteroconid and the anterolophulids in m1 and the shape of the anterolophule in M1, with morphotypes that resemble both older and younger populations of Apocricetus . Along …
Topography of somatostatin gene expression relative to molecular progenitor domains during ontogeny of the mouse hypothalamus
2010
The hypothalamus comprises alar, basal, and floor plate developmental compartments. Recent molecular data support a rostrocaudal subdivision into rostral (terminal) and caudal (peduncular) halves. In this context, the distribution of neuronal populations expressing somatostatin (Sst) mRNA was analyzed in the developing mouse hypothalamus, comparing with the expression pattern of the genes Orthopedia (Otp), Distal-less 5 (Dlx5), Sonic Hedgehog (Shh), and Nk2 homeobox 1 (Nkx2.1). At embryonic day 10.5 (E10.5), Sst mRNA was first detectable in the anterobasal nucleus, a Nkx2.1-, Shh-, and Otp-positive basal domain. By E13.5, nascent Sst expression was also related to two additional Otp-positiv…
Germinal center B cells govern their own fate via antibody feedback
2013
High-affinity antibodies reenter germinal centers (GCs) and limit antigen access, thus causing sustained directional evolution in GCs toward higher-affinity antibody production.
Systems level approach reveals the correlation of endoderm differentiation of mouse embryonic stem cells with specific microstructural cues of fibrin…
2014
Stem cells receive numerous cues from their associated substrate that help to govern their behaviour. However, identification of influential substrate characteristics poses difficulties because of their complex nature. In this study, we developed an integrated experimental and systems level modelling approach to investigate and identify specific substrate features influencing differentiation of mouse embryonic stem cells (mESCs) on a model fibrous substrate, fibrin. We synthesized a range of fibrin gels by varying fibrinogen and thrombin concentrations, which led to a range of substrate stiffness and microstructure. mESCs were cultured on each of these gels, and characterization of the diff…
Genome rearrangement distances and gene order phylogeny in gamma-Proteobacteria.
2005
Genome rearrangements have been studied in 30 gamma-proteobacterial complete genomes by comparing the order of a reduced set of genes on the chromosome. This set included those genes fulfilling several characteristics, the main ones being that an ortholog was present in every genome and that none of them had been acquired by horizontal gene transfer. Genome rearrangement distances were estimated based on either the number of breakpoints or the minimal number of inversions separating two genomes. Breakpoint and inversion distances were highly correlated, indicating that inversions were the main type of rearrangement event in gamma-Proteobacteria. In general, the progressive increase in seque…
Evolutionary priming and transition to the ectomycorrhizal habit in an iconic lineage of mushroom-forming fungi: is preadaptation a requirement?
2021
AbstractThe ectomycorrhizal symbiosis is an essential guild of many forested ecosystems and has a dynamic evolutionary history across kingdom Fungi, having independently evolved from diverse types of saprotrophic ancestors. In this study, we seek to identify genomic features of the transition to the ectomycorrhizal habit within the Russulaceae, one of the most diverse lineages of ectomycorrhizal fungi. We present comparative analyses of the pangenome and gene repertoires of 21 species across the order Russulales, including a closely related saprotrophic member of Russulaceae. The ectomycorrhizal Russulaceae is inferred to have originated around the Cretaceous-Paleogene extinction event (73.…