Search results for "localization"

showing 10 items of 443 documents

Single molecule localization microscopy of the distribution of chromatin using Hoechst and DAPI fluorescent probes.

2014

Several approaches have been described to fluorescently label and image DNA and chromatin in situ on the single-molecule level. These superresolution microscopy techniques are based on detecting optically isolated, fluorescently tagged anti-histone antibodies, fluorescently labeled DNA precursor analogs, or fluorescent dyes bound to DNA. Presently they suffer from various drawbacks such as low labeling efficiency or interference with DNA structure. In this report, we demonstrate that DNA minor groove binding dyes, such as Hoechst 33258, Hoechst 33342, and DAPI, can be effectively employed in single molecule localization microscopy (SMLM) with high optical and structural resolution. Upon ill…

DNA ReplicationHoechstDNA RepairDNA repairBiologyfluorescence microscopyDAPIchemistry.chemical_compoundphotoconversionsuper-resolution microscopylocalization microscopyFluorescence microscopeSPDMAnimalsHumansDAPIdSTORMSMLMFluorescent DyesMicroscopySuper-resolution microscopynucleusDNA replicationdSTORCell BiologyDNADNA Minor Groove BindingChromatinChromatinCell biologychemistryMicroscopy FluorescencechromatinblinkingDNAResearch PaperNucleus (Austin, Tex.)
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Tonoplast subcellular localization of maize cytochrome b5 reductases

2000

Plant cytochrome b 5 reductases (b 5 R) are assumed to be part of an ER-associated redox chain that oxidizes NADH to provide electrons via cytochrome b5 (cyt b 5 ) to ER-associated fatty acyl desaturase and related hydroxylases, as in mammalian cells. Here we report on cDNA cloning of a novel maize b 5 R, NFR II, strongly related to a previously cloned cDNA, NFR I (Bagnaresi et al., 1999, Biochem, J. 338, 499-5051. Maize b 5 R isoforms are produced by a small multi-gene family. The NFR cDNAs were shown to encode active b 5 Rs by heterologous expression in yeast. Both reductases, in addition to Fe 3+ -chelates, efficiently reduced Cu 2+ -chelates. Using a polyclonal antibody able to recogniz…

DNA ComplementaryMolecular Sequence DataSaccharomyces cerevisiaePlant ScienceMolecular cloningBiologyPlant RootsZea maysIsozymeGene Expression Regulation EnzymologicComplementary DNACytochrome b5GeneticsAmino Acid SequenceMicroscopy ImmunoelectronCytochrome ReductasesCytochrome b5 reductaseSequence Homology Amino AcidCytochrome bSequence Analysis DNACell BiologySubcellular localizationMolecular biologyIsoenzymesBiochemistryVacuolesHeterologous expressionSequence AlignmentCytochrome-B(5) ReductaseThe Plant Journal
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Identification of a novel Drosophila melanogaster gene, angel, a member of a nested gene cluster at locus 59F4,5.

1996

The identification of a novel Drosophila melanogaster gene, angel, is presented in this study. angel is located on the right arm of the second chromosome at locus 59F5, close to the nested genes l(2)tid, l(2)not, l(2)rot and l(2)dtl. We describe the genetic and molecular localization of angel and present its temporal expression in the wild-type. The deduced amino acid sequence of the ANG39 protein is characterized by a nuclear localization signal. Furthermore, the central part of the predicted ANG39 protein shows significant homology to the C-terminal portion of the yeast transcriptional effector CCR4.

DNA ComplementarySaccharomyces cerevisiae ProteinsMolecular Sequence DataRestriction MappingBiophysicsLocus (genetics)Genes InsectBiochemistryHomology (biology)ChromosomesFungal ProteinsRibonucleasesStructural BiologyGeneticsAnimalsDrosophila ProteinsAmino Acid SequenceCloning MolecularGenePeptide sequenceGeneticsbiologyBase SequenceEffectorChromosome MappingGene Expression Regulation Developmentalbiology.organism_classificationBlotting NorthernNested geneDrosophila melanogasterMultigene FamilyInsect ProteinsDrosophila melanogasterSequence AlignmentNuclear localization sequenceTranscription FactorsBiochimica et biophysica acta
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Cloning, structure, cellular localization, and possible function of the tumor suppressor gene lethal(3)malignant blood neoplasm-1 of Drosophila melan…

1994

The tumor suppressor gene, lethal(3)malignant blood neoplasm-1+, of Drosophila melanogaster is required for the differentiation of the phagocytic blood-cell type, the plasmatocyte. In the homozygously mutated state it causes the malignant transformation of these blood cells. We present here the cloning, sequencing, structure, and expression of the l(3)mbn-1+ gene during development. The cloned gene was identified by germ-line transformation, generation of revertants, and the detection of the corresponding mRNA in blood cells and other tissues. Homologies of the G-S-rich C-terminus of the putative MBN83 protein to human cytokeratins K1, K10, and mouse loricrin were found. The structure and p…

DNA ComplementaryTumor suppressor geneMolecular Sequence DataMalignant transformationGene expressionAnimalsGenes Tumor SuppressorAmino Acid SequenceRNA MessengerCloning MolecularMolecular BiologyGeneCellular localizationAllelesCloningBlood CellsbiologyBase SequenceChromosome MappingCell Biologybiology.organism_classificationMolecular biologyCell Transformation NeoplasticDrosophila melanogasterLoricrinDrosophila melanogasterDevelopmental BiologyDevelopmental biology
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[1,2,3]Triazolo[1,5-a]pyridines. A theoretical (DFT) study of the ring-chain isomerization

2008

The ring opening isomerization of [1,2,3]triazolo[1,5-a]pyridines to the corresponding 2-pyridyl derivatives has been studied by means of DFT calculations at the B3LYP/6-31+G(d,p) computational level. The effect of the substitution as well as those of protonation, deprotonation, and lithiation on different positions has been studied. The electronic characteristics of the optimized structures have been analyzed by means of the Atoms In Molecules (AIM), Electron Localization Function (ELF), Molecular Electrostatic Potential (MEP), and Natural Bond Orbital (NBO) methodologies. © 2008 Elsevier Ltd. All rights reserved.

DeprotonationComputational chemistryChemistryOrganic ChemistryDrug DiscoveryAtoms in moleculesTriazolopyridineProtonationRing (chemistry)BiochemistryIsomerizationElectron localization functionNatural bond orbital
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GW170817: Implications for the Stochastic Gravitational-Wave Background from Compact Binary Coalescences

2018

The LIGO Scientific and Virgo Collaborations have announced the first detection of gravitational waves from the coalescence of two neutron stars. The merger rate of binary neutron stars estimated from this event suggests that distant, unresolvable binary neutron stars create a significant astrophysical stochastic gravitational-wave background. The binary neutron star background will add to the background from binary black holes, increasing the amplitude of the total astrophysical background relative to previous expectations. In the Advanced LIGO-Virgo frequency band most sensitive to stochastic backgrounds (near 25 Hz), we predict a total astrophysical background with amplitude $\Omega_{\rm…

Design sensitivityneutron star: binarygravitational radiation: stochasticAstronomyX-ray binaryGeneral Physics and AstronomyAstrophysicsAstrophysics01 natural sciencesGeneral Relativity and Quantum CosmologylocalizationGravitational wave backgroundGravitational Waves Neutron Stars Stochastic Background Virgo LIGOblack holeLIGOstochastic modelQCQBPhysicsGAMMA-RAY BURSTSSignal to noise ratioStochastic systemsBlack holesGravitational effectsarticleAstrophysics::Instrumentation and Methods for AstrophysicsComputingMethodologies_DOCUMENTANDTEXTPROCESSING[PHYS.GRQC]Physics [physics]/General Relativity and Quantum Cosmology [gr-qc]Gravitational wave sources Experimental studies of gravity Gravitational WavesGravitationBinary neutron starsX-ray bursterBinsAstrophysics::High Energy Astrophysical PhenomenaMERGERSFOS: Physical sciencesGeneral Relativity and Quantum Cosmology (gr-qc)Astrophysics::Cosmology and Extragalactic AstrophysicsGravity wavesgravitational radiation: direct detectionBinary pulsarNeutron starsSTAR-FORMATIONPhysics and Astronomy (all)General Relativity and Quantum CosmologyBinary black holebinary: coalescence0103 physical sciencesFrequency bandsddc:530RATESINTERFEROMETERS010306 general physicsAstrophysics::Galaxy AstrophysicsNeutronsGravitational Waves010308 nuclear & particles physicsGravitational waveVirgogravitational radiation: backgroundgravitational radiationAstronomyNeutron Stars530 Physikbinary: compactsensitivityStarsLIGObackground: stochasticEVOLUTIONsignal noise ratioVIRGOPhysics and Astronomyblack hole: binarygravitational radiation: emissionStellar black holeStochastic BackgroundDewey Decimal Classification::500 | Naturwissenschaften::530 | PhysikHIGH-REDSHIFTneutron star: coalescencePhysical Review Letters
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Search for Subsolar-Mass Ultracompact Binaries in Advanced LIGO's First Observing Run

2018

We present the first Advanced LIGO and Advanced Virgo search for ultracompact binary systems with component masses between 0.2 $M_\odot$ - 1.0 $M_\odot$ using data taken between September 12, 2015 and January 19, 2016. We find no viable gravitational wave candidates. Our null result constrains the coalescence rate of monochromatic (delta function) distributions of non-spinning (0.2 $M_\odot$, 0.2 $M_\odot$) ultracompact binaries to be less than $1.0 \times 10^6 \text{Gpc}^{-3} \text{yr}^{-1}$ and the coalescence rate of a similar distribution of (1.0 $M_\odot$, 1.0 $M_\odot$) ultracompact binaries to be less than $1.9 \times 10^4 \text{Gpc}^{-3} \text{yr}^{-1}$ (at 90 percent confidence). N…

Dewey Decimal Classification::500 | Naturwissenschaften::550 | Geowissenschaftendensity: fluctuationMACHOAstronomyGeneral Physics and AstronomyPrimordial black holeAstrophysicsCoalescence01 natural sciencesGeneral Relativity and Quantum CosmologylocalizationLIMITSddc:550Massive compact halo objectLIGOneutron starQCQBPhysicseducation.field_of_studyPhysicsDensity fluctuationBinary systemsgravitational wavesPhysical SciencesSearch enginesastro-ph.COblack hole: primordialAstrophysics - Cosmology and Nongalactic AstrophysicsGravitationCosmology and Nongalactic Astrophysics (astro-ph.CO)gr-qcBinary formationAstrophysics::High Energy Astrophysical PhenomenaPopulationDark matterPhysics MultidisciplinaryEarly universeFOS: Physical sciencesPrimordial black holesGeneral Relativity and Quantum Cosmology (gr-qc)dark matter: densityAstrophysics::Cosmology and Extragalactic AstrophysicsGravity wavesCoalescence rateGravitation and AstrophysicsPhysics and Astronomy (all)General Relativity and Quantum Cosmologybinary: coalescence0103 physical sciencesddc:530Delta functions010306 general physicseducationSTFCAstrophysics::Galaxy AstrophysicsScience & Technologymass: solar010308 nuclear & particles physicsGravitational waveStellar evolutionsbinary: formationgravitational radiationRCUKblack hole: massGalaxiesStarsGalaxyLIGOBlack holeVIRGOPhysics and Astronomyblack hole: binarygravitational radiation: emissionDewey Decimal Classification::500 | Naturwissenschaften::530 | PhysikMicro-lensing[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph]
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Electronic fluxes during diels-alder reactions involving 1,2-benzoquinones: mechanistic insights from the analysis of electron localization function …

2012

By means of the joint use of electron localization function (ELF) and Thom's catastrophe theory, a theoretical analysis of the energy profile for the hetero-Diels-Alder reaction of 4-methoxy-1,2-benzoquinone 1 and methoxyethylene 2 has been carried out. The 12 different structural stability domains obtained by the bonding evolution theory have been identified as well as the bifurcation catastrophes (fold and cusp) responsible for the changes in the topology of the system. This analysis permits finding a relationship between the ELF topology and the evolution of the bond breaking/forming processes and electron pair rearrangements through the reaction progress in terms of the different ways o…

Diels-Alder reactionsElectron pairElectron localization functionMolecular StructureChemistryCatastrophe theoryRegioselectivityElectronsGeneral ChemistryElectron localization function12-benzoquinonesComputational MathematicsRegioselectivityEnergy profileNucleophileChemical physicsComputational chemistryElectrophileBenzoquinonesQuantum TheoryDensity functional theoryCatastrophe theoryJournal of Computational Chemistry
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Crystal behavior of potassium bromate under compression.

2015

We report on high-pressure angle-dispersive X-ray diffraction data up to 15 GPa andab initiototal-energy calculations up to 242 GPa for KBrO3. No phase transition was found below 15 Pa in contrast to previously reported data. Its experimental bulk modulus in the quasi-hydrostatic regime isB0= 18.8 (9) GPa with a bulk modulus pressure derivativeB′0= 8.2 (4). However, according to ourab initiocalculations, KBrO3significantly reduces its rhombohedral distortionviasmall cooperative movements of the atoms and the structure progressively approaches the cubic symmetry, where the KBr subarray would adopt a topology similar to that of the corresponding B2-type bromide. This rearrangement of atoms is…

DiffractionPhase transitionBulk modulusChemistryMetals and AlloysAb initioAtomic and Molecular Physics and OpticsElectron localization functionElectronic Optical and Magnetic MaterialsCrystalCrystallographyAb initio quantum chemistry methodsMaterials ChemistryIsostructuralActa crystallographica Section B, Structural science, crystal engineering and materials
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A small HSP, Lo18, interacts with the cell membrane and modulates lipid physical state under heat shock conditions in a lactic acid bacterium

2005

International audience; The small heat shock proteins (sHSP) are characterized by a chaperone activity to prevent irreversible protein denaturation. This study deals with the sHSP Lo18 induced by multiple stresses in Oenococcus oeni, a lactic acid bacterium. Using in situ immunocytochemistry and cellular fractionation experiments, we demonstrated the association of Lo18 with the membrane in O. oeni cells submitted to heat shock. The same result was obtained after exposure of cells to ethanol or benzyl alcohol, agents known to have an influence on membranes. For the different stresses, the protein was located on the periphery of the cell at membrane level and was also found within the cytopl…

DiphenylhexatrieneHot TemperatureBiophysicsFluorescence PolarizationBiologyBiochemistryImmunolocalizationSmall HSPCell membraneMembrane Lipids03 medical and health scienceschemistry.chemical_compoundHeat shock proteinMembrane fluiditymedicineMembrane fluidityLipid bilayer030304 developmental biologyOenococcus oeni0303 health sciences030306 microbiologyCell MembraneLipid–protein interactionCell Biologybiology.organism_classificationHeat-Shock Proteins SmallGram-Positive CocciMembranemedicine.anatomical_structure[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologychemistryBiochemistryBiophysicsLipochaperoneLaurdanOenococcus oeni
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