Search results for "loss"
showing 10 items of 2103 documents
Characterization of eight microsatellite loci for the sea urchin Meoma ventricosa (Spatangoida, Brissidae) through Next Generation Sequencing.
2015
Eight microsatellite loci were characterized for Meoma ventricosa (Lamarck, 1816), a burrowing sea urchin that can be afflicted by a bacterial disease causing localized mass mortality. For the analyzed population (29 individuals from St. Croix, US Virgin Islands), we observed 8.125 mean number of alleles, 0.640 mean observed heterozygosity (Ho) and 0.747 mean expected heterozygosity (He). Two loci showed significant deviations from Hardy-Weinberg equilibrium. Overall, the described loci were characterized by a moderately highlevel of polymorphism suggesting that these markers are useful for a population genetic studyin the Caribbean Sea.
The impact of Carpobrotus cfr. acinaciformis (L.) L. Bolus on soil nutrients, microbial communities structure and native plant communities in Mediter…
2016
Background and aims: Carpobrotus spp. are amongst the most impactful and widespread plant invaders of Mediterranean habitats. Despite the negative ecological impacts on soil and vegetation that have been documented, information is still limited about the effect by Carpobrotus on soil microbial communities. We aimed to assess the changes in the floristic, soil and microbial parameters following the invasion by Carpobrotus cfr. acinaciformis within an insular Mediterranean ecosystem. Methods: Within three study areas a paired-site approach, comparing an invaded vs. a non-invaded plot, was established. Within each plot biodiversity indexes, C and N soil content, pH and microbial biomass and st…
Intégrer la connectivité paysagère dans la séquence ERC : une approche par la quantité d'habitat atteignable
2019
Des engagements nationaux, européens et internationaux ont été pris pour maintenir et restaurer la connectivité entre habitats naturels face à la perte et à la fragmentation de ces habitats. Dans le même temps, les politiques environnementales dans différents pays mettent en oeuvre la séquence Eviter-Réduire-Compenser (ERC) pour atteindre l’objectif d’absence de perte nette de biodiversité (PPN). La séquence ERC a pour principe d’évaluer l’ensemble des impacts écologiques d’un aménagement, mais les critères et indicateurs permettant de quantifier les impacts sur la connectivité paysagère ne sont pas satisfaisants. Nous proposons une démarche opérationnelle pour évaluer les impacts environne…
β-Amyrin Synthase1 Controls the Accumulation of the Major Saponins Present in Pea (Pisum sativum)
2021
Abstract The use of pulses as ingredients for the production of food products rich in plant proteins is increasing. However, protein fractions prepared from pea or other pulses contain significant amounts of saponins, glycosylated triterpenes that can impart an undesirable bitter taste when used as an ingredient in foodstuffs. In this article, we describe the identification and characterization of a gene involved in saponin biosynthesis during pea seed development, by screening mutants obtained from two Pisum sativum TILLING (Targeting Induced Local Lesions IN Genomes) populations in two different genetic backgrounds. The mutations studied are located in a gene designated PsBAS1 (β-amyrin s…
Heterozygosity-fitness correlations in adult and juvenile Zenaida Dove, Zenaida aurita.
2013
10 pages; International audience; Understanding how fitness is related to genetic variation is of crucial importance in both evolutionary ecology and conservation biology. We report a study of heterozygosity-fitness correlations in a wild, noninbred population of Zenaida Doves, Zenaida aurita, based on a sample comprising 489 individuals (382 adults and 107 juveniles) typed at 13 microsatellite loci, resulting in a data set comprising 5793 genotypes. In both adults and juveniles, and irrespective of sex, no evidence was found for an effect of either multilocus or single-locus heterozygosity on traits potentially related to fitness such as foraging tactic, competitive ability, and fluctuatin…
First identification of polymorphic microsatellite markers in the Burgundy truffle, Tuber aestivum (Tuberaceae)
2014
SPEIPMCT2Pour cette revue, la version de l'éditeur est autorisée mais il y a un embargo d'un an (mentionné dans les Conditions générales : "On Institutional Repositories after 12 months").On peut donc mettre la PJ en "publique" mais il faut indiquer une date d'embargo (un an à partir de la date de publication). L'embargo sera levé automatiquement. Laissée lors du dépôt en workflow par prudence.; Premise of the study: Tuber aestivum, the most common truffle in Europe, plays an important role in the commercial truffle market. For the first time, microsatellite primers were developed to investigate polymorphism within this species. • Methods and Results: Using direct shotgun pyrosequencing, 15…
Wood-decaying fungi in old-growth boreal forest fragments: extinctions and colonizations over 20 years
2021
According to ecology theory, isolated habitat fragments cannot maintain populations of specialized species. Yet, empirical evidence based on monitoring of the same fragments over time is still limited. We studied the colonizationâextinction dynamics of eight wood-decaying fungal species in 16 old-growth forest fragments (<14 ha) over a 20-year period (1997â2017). We observed 19 extinctions and 5 colonizations; yet, the distribution of extinctions and colonizations did not differ from the one expected by chance for any of the species. Twenty-six percent of the extinctions took place in two natural fragments amid large forestâpeatland complexes. (Romell) Bourdot and Galzin decreased …
A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning
2020
ABSTRACT Background Diploid genome assembly is typically impeded by heterozygosity because it introduces errors when haplotypes are collapsed into a consensus sequence. Trio binning offers an innovative solution that exploits heterozygosity for assembly. Short, parental reads are used to assign parental origin to long reads from their F1 offspring before assembly, enabling complete haplotype resolution. Trio binning could therefore provide an effective strategy for assembling highly heterozygous genomes, which are traditionally problematic, such as insect genomes. This includes the wood tiger moth (Arctia plantaginis), which is an evolutionary study system for warning colour polymorphism. F…
Weed and Weeding Effects on Medicinal Herbs
2017
Competition with weeds exerts significant depressive effects on yield and quality features of Medicinal Plants (MPs). According to the crop, the part of plant to be harvested, the environmental features (including cropping technique) and the severity of infestation, yield losses due to the presence of weeds may vary within wide intervals. Furthermore, unlike the majority of other crops, MPs are cultivated with the goal to obtain relevant quantities of specific secondary metabolites, whose final quantity determines the quality level (and, consequently, the market value) of the harvested drug. Almost all papers addressed to this topic agree on the statement that unrestricted weed growth may a…
Linking the Kinetic Energy Fraction and Equivalent Length Method for Trickle Irrigation Design under Local Losses
2020
New methods using analytical relationships to design drip irrigation laterals and subunits have been introduced in recent years based on the assumption that minor losses can be neglected. This assumption could be relaxed by applying the equivalent method, which makes it possible to account for minor losses, such as those caused by emitter connections, through formulas based on the rationale that an equivalent length of the drip lateral produces the same losses. However, equivalent length formulas are empirical; thus, they do not necessarily cover the entire range of conditions in the real-world contexts in which the formulas will be applied, and their extrapolation could lead to erroneous r…