Search results for "lost"

showing 10 items of 626 documents

Molecular signatures of silencing suppression degeneracy from a complex RNA virus

2021

As genomic architectures become more complex, they begin to accumulate degenerate and redundant elements. However, analyses of the molecular mechanisms underlying these genetic architecture features remain scarce, especially in compact but sufficiently complex genomes. In the present study, we followed a proteomic approach together with a computational network analysis to reveal molecular signatures of protein function degeneracy from a plant virus (as virus-host protein-protein interactions). We employed affinity purification coupled to mass spectrometry to detect several host factors interacting with two proteins of Citrus tristeza virus (p20 and p25) that are known to function as RNA sil…

0106 biological sciences0301 basic medicineProteomicsCitrusInteraction NetworksPathogenesisPlant Sciencemedicine.disease_causePathology and Laboratory Medicine01 natural sciencesInteractomeBiochemistryBimolecular fluorescence complementationRNA interferenceRNA silencing supressorsCitrus tristeza virusMedicine and Health SciencesDegeneracy (biology)Protein Interaction MapsBiology (General)H20 Plant diseasesPlant ProteinsEcologybiologyPlant virusesEukaryotaArgonautePlantsSmall interfering RNANucleic acidsRNA silencingComputational Theory and MathematicsGenetic interferenceExperimental Organism SystemsModeling and SimulationProteomeArgonaute ProteinsHost-Pathogen InteractionsRNA ViralEpigeneticsResearch ArticleClosterovirusRNA virusViral proteinQH301-705.5Arabidopsis ThalianaPlant PathogensComputational biologyGenome ViralBrassicaResearch and Analysis MethodsModels BiologicalPlant Viral Pathogens03 medical and health sciencesCellular and Molecular NeuroscienceViral ProteinsModel OrganismsPlant and Algal ModelsTobaccomedicineGeneticsGenomesNon-coding RNAProtein InteractionsMolecular signaturesMolecular BiologyEcology Evolution Behavior and SystematicsPlant DiseasesHost Microbial InteractionsBiology and life sciencesMass spectrometryOrganismsComputational BiologyProteinsRNA virusPlant Pathologybiology.organism_classificationGene regulationRepressor Proteins030104 developmental biologyU30 Research methodsAnimal StudiesRNAGene expression010606 plant biology & botanyF30 Plant genetics and breeding
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Gastrointestinal parasites of two populations of Arctic foxes (Vulpes lagopus) from north-east Greenland

2017

Parasitological examination of 275 faecal samples from Arctic foxes (Vulpes lagopus) collected at Zackenberg Valley and Karupelv Valley in north-east Greenland from 2006 to 2008 was conducted using sieving and microscopy. Overall, 125 (45.5%) samples contained parasite eggs of Taenia crassiceps, Taenia serialis, Toxascaris leonina, Eucoleus boehmi, Physalopteridae and Ancylostomatidae, and Strongyloides-like larvae. As long-term ecological studies are conducted at both sampling locations, the present findings constitute a baseline data set for further parasitological monitoring.

0106 biological sciences0301 basic medicineVulpesEucoleus boehmiZoologyOceanography010603 evolutionary biology01 natural sciencesToxascaris leoniana03 medical and health scienceslcsh:OceanographyEarth and Planetary Sciences (miscellaneous)Environmental Chemistry[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyToxascaris leonina14. Life underwaterlcsh:GC1-1581lcsh:Environmental sciencesGeneral Environmental ScienceTaenia crassicepslcsh:GE1-350Toxascaris leoninabiologyAncylostomatidaeTaeniaEcologyfaecal analysis030108 mycology & parasitologybiology.organism_classificationTaenia serialisArcticLagopusTaeniaArctic parasites[SDE.BE]Environmental Sciences/Biodiversity and Ecologycoprological examinationPolar Research
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Shoaling with infected conspecifics does not improve resistance to trematode infection

2018

Group‐living animals can gain protection against parasitic infections through social contacts with previously infected conspecifics (social immunization). Recent research suggests that such protective effects can be induced through visual or chemical cues released by infected individuals, resulting in anticipatory immune upregulation among group members. Here, we study cue‐induced social resistance in rainbow trout Oncorhynchus mykiss exposed to a trematode parasite, the eye‐fluke Diplostomum pseudospathaceum. We established groups of naïve individuals (receivers) that were paired with previously infected individuals (donors) at different ratios of donors to receivers and at different time …

0106 biological sciences0301 basic medicineZoologyDiplostomum pseudospathaceumGroup living010603 evolutionary biology01 natural sciencesDiplostomum pseudospathaceum03 medical and health scienceskirjolohisocial immunizationloisetParasite hostingimmuniteettiryhmätEcology Evolution Behavior and SystematicsResistance (ecology)biologygroup livingShoaling and schoolingbiology.organism_classificationrainbow troutcue030104 developmental biologyparasiteta1181Animal Science and ZoologyRainbow trout
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The combined effect on initial glucose concentration and pH control strategies for acetone-butanol-ethanol (ABE) fermentation by Clostridium acetobut…

2021

Abstract The use and depletion of fossil fuels raised the interest in biofuels like biobutanol. Clostridium acetobutylicum DSM 792 is capable of producing biobutanol through ABE fermentation. Butanol production can be influenced by low sugar concentrations, like those obtained after hydrolysis of pre-treated lignocellulosic biomass. This study aimed to evaluate the influence of the initial glucose concentrations (33, 66 and 100 g L−1) and pH control strategies on biobutanol production and glucose consumption. Uncontrolled pH fermentation exhibited low butanol production due to either glucose exhaustion (33 g L−1) or the phenomenon of acid crash (66 and 100 g L−1), which was alleviated by th…

0106 biological sciences0303 health sciencesAcidogenesisEnvironmental EngineeringClostridium acetobutylicumbiologyChemistryButanolBiomedical EngineeringLignocellulosic biomassBioengineeringbiology.organism_classification01 natural sciences03 medical and health sciencesHydrolysischemistry.chemical_compoundBiofuel010608 biotechnologyFermentationFood scienceSugar030304 developmental biologyBiotechnologyBiochemical Engineering Journal
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A new parasitoid (Hymenoptera: Braconidae: Aphidiinae) of the invasive bamboo aphidsTakecallisspp. (Hemiptera: Aphididae) from Western Europe

2017

ABSTRACTA long-term survey of tritrophic (plant–aphid–parasitoid) associations in the urban ecosystems of Lleida (Catalonia) and Paris (France) resulted in the detection of associations of two bamboo aphids, Takecallis arundinariae (Essig) and Takecallis taiwanus (Takahashi), respectively, with a new aphid parasitoid species. Trioxys remaudierei Starý & Rakhshani sp. nov. is described and illustrated as a unique parasitoid of Takecallis aphids outside the area of their origin. The new species is easily distinguishable from its congeners in having the ventral prongs of the abdomen fused over two-thirds of their length, then bifurcated towards the tip. The only morphologically similar species…

0106 biological sciencesAphidbiologyAphididaeHymenopterabiology.organism_classification010603 evolutionary biology01 natural sciencesHemipteraParasitoidPhyllostachysBotanyAphidiinaeBraconidaeEcology Evolution Behavior and Systematics010606 plant biology & botanyJournal of Natural History
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Eye fluke-induced cataracts in natural fish populations: is there potential for host manipulation?

2010

SUMMARYManipulation of host phenotype (e.g. behaviour, appearance) is suggested to be a common strategy to enhance transmission in trophically transmitted parasites. However, in many systems, evidence of manipulation comes exclusively from laboratory studies and its occurrence in natural host populations is poorly understood. Here, we examined the potential for host manipulation by Diplostomum eye flukes indirectly by quantifying the physiological effects of parasites on fish. Earlier laboratory studies have shown that Diplostomum infection predisposes fish to predation by birds (definitive hosts of the parasites) by reducing fish vision through cataract formation. However, occurrence of ca…

0106 biological sciencesBehavior Controlgenetic structuresOceans and SeasGasterosteusEye010603 evolutionary biology01 natural sciencesCataractHost-Parasite Interactions03 medical and health sciencesLeuciscusFish DiseasesfoodCoregonus lavaretusDiplostomum; Parasite-host interactions; Parasite transmission; Predation; TrematodaVision in fishesAnimalsGymnocephalus030304 developmental biology0303 health sciencesbiologyfood.dishRaptorsEcologyta1184Fishesbiology.organism_classificationeye diseases3. Good healthObligate parasiteInfectious DiseasesPredatory Behaviorta1181Animal Science and ZoologyParasitologyTrematodaRutilusTrematodaParasitology
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Reciprocal Interaction Matrix Reveals Complex Genetic and Dose-Dependent Specificity among Coinfecting Parasites

2012

Understanding genetic specificity in factors determining the outcome of host-parasite interactions is especially important as it contributes to parasite epidemiology, virulence, and maintenance of genetic variation. Such specificity, however, is still generally poorly understood. We examined genetic specificity in interactions among coinfecting parasites. In natural populations, individual hosts are often simultaneously infected by multiple parasite species and genotypes that interact. Such interactions could maintain genetic variation in parasite populations if they are genetically specific so that the relative fitness of parasite genotypes varies across host individuals depending on (1) t…

0106 biological sciencesGenotypeVirulence010603 evolutionary biology01 natural sciencesDiplostomum pseudospathaceumHost Specificity03 medical and health sciencesGenotypeGenetic variationmedicineParasite hostingAnimalsEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health sciencesbiologyHost (biology)CoinfectionGenetic Variationmedicine.diseasebiology.organism_classification3. Good healthOncorhynchus mykissCoinfectionTrematodaTrematodaAmerican Naturalist
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Antibiotics accelerate growth at the expense of immunity

2021

Antibiotics have long been used in the raising of animals for agricultural, industrial or laboratory use. The use of subtherapeutic doses in diets of terrestrial and aquatic animals to promote growth is common and highly debated. Despite their vast application in animal husbandry, knowledge about the mechanisms behind growth promotion is minimal, particularly at the molecular level. Evidence from evolutionary research shows that immunocompetence is resource-limited, and hence expected to trade off with other resource-demanding processes, such as growth. Here, we ask if accelerated growth caused by antibiotics can be explained by genome-wide trade-offs between growth and costly immunocompete…

0106 biological sciencesHOSTAntibioticsINSECTSDIVERSITYmicrobiomeMothsTrade-offkarjanhoito01 natural sciencesantibioticsimmunologiaINFECTIONgeeniekspressioLife History TraitsResearch ArticlesGeneral Environmental ScienceBODY-SIZE2. Zero hunger0303 health sciencesantibiootitTRADE-OFFSGeneral MedicineAnimal husbandryBiological EvolutionLEPIDOPTERAAccelerated GrowthAnti-Bacterial AgentsWARNING COLORATIONimmuunijärjestelmäLarvaeläimetBACTERIAImmunocompetenceGeneral Agricultural and Biological SciencesRNA-interferenssimedicine.drug_classjalostusZoologykotieläintuotantoBiology010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesImmune systemgrowth promotionImmunityPARASEMIAmedicineAnimalsMicrobiomeimmunity trade-off1172 Environmental sciences030304 developmental biologygeenitGeneral Immunology and MicrobiologyGenetics and Genomicsmikrobisto3111 Biomedicine
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Innate antipredator behavior can promote infection in fish even in the absence of predators

2019

Natural enemies—predators and parasites—largely shape the dynamics of ecosystems. It is known that antipredator and antiparasite defense can be mutually conflicting, however consequences of this trade-off for the regulation of infection burden in animals are still poorly understood. We hypothesize that even in the absence of cues from predators, innate antipredator behavior (“ghost of predation past”) interferes with defense against parasites and can enhance the infection risk. As a case study, we explore interactions between a commercial species, the rainbow trout Oncorhynchus mykiss, and its parasite, the trematode eye-fluke Diplostomum pseudospathaceum. Fish–parasite interactions were te…

0106 biological sciencesInfection riskbiology010604 marine biology & hydrobiologyFish farmingParasitismZoologybiology.organism_classification010603 evolutionary biology01 natural sciencesDiplostomum pseudospathaceumPredationIncreased stressFish <Actinopterygii>Animal Science and ZoologyNatural enemiesEcology Evolution Behavior and SystematicsBehavioral Ecology
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New insights into the enameloid microstructure of batoid fishes (Chondrichthyes)

2016

Chondrichthyan teeth are capped with a hypermineralized tissue known as enameloid. Its microstructure displays a hierarchical organization that has increased in structural complexity from a homogenous single-crystallite enameloid (SCE) in early Chondricthyans to the complex multilayered enameloid found in modern sharks (consisting of bundles of crystallites arranged in intriguing patterns). Recent analyses of the enameloid microstructure in batoid fishes, focused on Myliobatiformes and fossil taxa, point to the presence of a bundled (or fibred) multilayered enameloid, a condition proposed as plesiomorphic for Batoidea. In this work, we provide further enameloid analysis for a selection of t…

0106 biological sciencesMyliobatiformes010506 paleontologybiologySem analysisRhina ancylostomaBiodiversityEnameloidbiology.organism_classificationMicrostructure010603 evolutionary biology01 natural sciencesChondrichthyesSymplesiomorphyPaleontologyEvolutionary biologyBatoideaAnimal Science and ZoologyEcology Evolution Behavior and SystematicsTaxonomy0105 earth and related environmental sciencesZoological Journal of the Linnean Society
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