Search results for "mapping"

showing 10 items of 1508 documents

Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance.

2000

AbstractPosttranscriptional gene silencing (PTGS) in plants results from the degradation of mRNAs and shows phenomenological similarities with quelling in fungi and RNAi in animals. Here, we report the isolation of sgs2 and sgs3 Arabidopsis mutants impaired in PTGS. We establish a mechanistic link between PTGS, quelling, and RNAi since the Arabidopsis SGS2 protein is similar to an RNA-dependent RNA polymerase like N. crassa QDE-1, controlling quelling, and C. elegans EGO-1, controlling RNAi. In contrast, SGS3 shows no significant similarity with any known or putative protein, thus defining a specific step of PTGS in plants. Both sgs2 and sgs3 mutants show enhanced susceptibility to virus, d…

0106 biological sciencesRNA-induced transcriptional silencingDNA PlantRNA-induced silencing complexTrans-acting siRNAMolecular Sequence DataPotyvirusArabidopsisRNA-dependent RNA polymerase[SDV.BC]Life Sciences [q-bio]/Cellular BiologyGenes Plant01 natural sciencesCucumovirusGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesSolanum lycopersicumRNA interferenceArabidopsisGene expressionGene silencingAmino Acid SequenceGene SilencingCloning MolecularRNA Processing Post-Transcriptional[SDV.BC] Life Sciences [q-bio]/Cellular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biologyPlant DiseasesPlant ProteinsGenetics0303 health sciencesbiologyBase SequenceBiochemistry Genetics and Molecular Biology(all)Arabidopsis ProteinsfungiTobamovirusChromosome MappingGENETIQUEbiology.organism_classificationRNA-Dependent RNA PolymeraseMutagenesis010606 plant biology & botanyCell
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Summarizing Large Scale 3D Mesh

2018

International audience; Recent progress in 3D sensor devices and in semantic mapping allows to build very rich HD 3D maps very useful for autonomous navigation and localization. However , these maps are particularly huge and require important memory capabilities as well computational resources. In this paper, we propose a new method for summarizing a 3D map (Mesh) as a set of compact spheres in order to facilitate its use by systems with limited resources (smartphones, robots, UAVs, ...). This vision-based summarizing process is applied in a fully automatic way using jointly photometric, geometric and semantic information of the studied environment. The main contribution of this research is…

0209 industrial biotechnologyComputer science020206 networking & telecommunications02 engineering and technologycomputer.software_genreVisualization[SPI.AUTO]Engineering Sciences [physics]/Automatic020901 industrial engineering & automation[SPI.AUTO] Engineering Sciences [physics]/AutomaticSemantic mapping0202 electrical engineering electronic engineering information engineeringEntropy (information theory)Polygon meshData miningcomputer
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Autonomous 3D geometry reconstruction through robot-manipulated optical sensors

2021

Abstract Many industrial sectors face increasing production demands and need to reduce costs, without compromising the quality. Whereas mass production relies on well-established protocols, small production facilities with small lot sizes struggle to update their highly changeable production at reasonable costs. The use of robotics and automation has grown significantly in recent years, but extremely versatile robotic manipulators are still not commonly used in small factories. Beside of the investments required to enable efficient and profitable use of robot technology, the efforts needed to program robots are only economically viable in case of large lot sizes. Generating robot programs f…

0209 industrial biotechnologyComputer scienceReal-time computingPoint cloud02 engineering and technologyMetrologyIndustrial and Manufacturing EngineeringField (computer science)020901 industrial engineering & automationSoftware0202 electrical engineering electronic engineering information engineeringView planning3D reconstructionbusiness.industryAdaptive mappingMechanical EngineeringInspection3D reconstructionRoboticsRoboticsAutomationComputer Science ApplicationsControl and Systems EngineeringTrajectoryRobot020201 artificial intelligence & image processingArtificial intelligencebusinessSoftware
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Quality Assessment of Reconstruction and Relighting from RTI Images: Application to Manufactured Surfaces

2019

In this paper, we propose to evaluate the quality of the reconstruction and relighting from images acquired by a Reflectance Transformation Imaging (RTI) device. Three relighting models, namely the PTM, HSH and DMD, are evaluated using PSNR and SSIM. A visual assessment of how the reconstructed surfaces are perceived is also carried out through a sensory experiment. This study allows to estimate the relevance of these models to reproduce the appearance of the manufactured surfaces. It also shows that DMD reproduces the most accurate reconstruction/relighting to an acquired measurement and that a higher sampling density don't mean necessarily a higher perceptual quality.

0209 industrial biotechnologyComputer sciencebusiness.industryQuality assessmentmedia_common.quotation_subject02 engineering and technologyIterative reconstruction020901 industrial engineering & automationVisual assessment0202 electrical engineering electronic engineering information engineering020201 artificial intelligence & image processingComputer visionQuality (business)Relevance (information retrieval)Artificial intelligenceSampling densityPolynomial texture mappingbusinessSurface reconstructionmedia_common2019 15th International Conference on Signal-Image Technology & Internet-Based Systems (SITIS)
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A proposed mapping method for aligning machine execution data to numerical control code

2019

The visions of the digital thread and smart manufacturing have boosted the potential of relating downstream data to upstream decisions in design. However, to date, the tools and methods to robustly map across the related data representations is significantly lacking. In response, we propose a mapping technique for standard manufacturing data representations. Specifically, we focus on relating controller data from machining tools in the form of MTConnect, an emerging standard that defines the vocabulary and semantics as well as communications protocols for execution data, and G-Code, the most widely used standard for numerical control (NC) instructions. We evaluate the efficacy of our mappin…

0209 industrial biotechnologyVocabulary021103 operations researchComputer sciencemedia_common.quotation_subject0211 other engineering and technologies02 engineering and technologyThread (computing)computer.software_genreData mappingData modeling020901 industrial engineering & automationMachiningMTConnectNumerical controlData miningCommunications protocolcomputermedia_common2019 IEEE 15th International Conference on Automation Science and Engineering (CASE)
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Digital Volunteers in Disaster Response: Accessibility Challenges

2019

The emergence of the Digital Humanitarian Volunteer (DHV) movements when disaster strikes have drawn the attention of researchers and practitioners in the emergency management and humanitarian domain. While there are established players in this rapidly developing field, there are still unresolved challenges, including accessibility of their digital tools and platforms. The purposes of this paper are twofold. First, it describes the background, impact and future potential of the DHV movement, and discusses the importance of universal design for the digital tools and platforms used for crowdsourcing of crisis information. Second, this paper shows how lack of concern for universal design and a…

021110 strategic defence & security studiesEmergency managementCrisis mappingbusiness.industryComputer scienceInternet privacy0211 other engineering and technologies02 engineering and technologyAccessibilityDisaster responseCrisis mappingCrowdsourcingField (computer science)Digital humanitarian volunteersDomain (software engineering)020204 information systems0202 electrical engineering electronic engineering information engineeringCrowdsourcingSituational ethicsbusiness
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Injury-activated glial cells promote wound healing of the adult skin in mice

2018

Cutaneous wound healing is a complex process that aims to re-establish the original structure of the skin and its functions. Among other disorders, peripheral neuropathies are known to severely impair wound healing capabilities of the skin, revealing the importance of skin innervation for proper repair. Here, we report that peripheral glia are crucially involved in this process. Using a mouse model of wound healing, combined with in vivo fate mapping, we show that injury activates peripheral glia by promoting de-differentiation, cell-cycle re-entry and dissemination of the cells into the wound bed. Moreover, injury-activated glia upregulate the expression of many secreted factors previously…

0301 basic medicine10017 Institute of AnatomyGeneral Physics and AstronomyTransforming Growth Factor betaMedicinelcsh:ScienceMyofibroblastsCells CulturedSkinMice KnockoutMultidisciplinaryintegumentary systemSOXE Transcription FactorsQCell CycleCell Differentiation3100 General Physics and AstronomyCell biologyMice Inbred DBACutaneous woundMyofibroblastNeurogliaSignal TransductionMice 129 StrainScienceMice Transgenic610 Medicine & health1600 General ChemistryGeneral Biochemistry Genetics and Molecular BiologyArticle03 medical and health sciencesParacrine signallingDownregulation and upregulationIn vivoFate mapping1300 General Biochemistry Genetics and Molecular BiologyAnimalsHumansEpithelial proliferationWound Healingbusiness.industryGene Expression ProfilingGeneral ChemistryMice Inbred C57BL030104 developmental biology10032 Clinic for Oncology and Hematology570 Life sciences; biologylcsh:QWound healingbusiness
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Computational processing and quality control of Hi-C, capture Hi-C and capture-C data

2019

Hi-C, capture Hi-C (CHC) and Capture-C have contributed greatly to our present understanding of the three-dimensional organization of genomes in the context of transcriptional regulation by characterizing the roles of topological associated domains, enhancer promoter loops and other three-dimensional genomic interactions. The analysis is based on counts of chimeric read pairs that map to interacting regions of the genome. However, the processing and quality control presents a number of unique challenges. We review here the experimental and computational foundations and explain how the characteristics of restriction digests, sonication fragments and read pairs can be exploited to distinguish…

0301 basic medicine570lcsh:QH426-470media_common.quotation_subjectContext (language use)ReviewComputational biologyBiologyProcessingGenome576Capture Hi-C03 medical and health sciences0302 clinical medicineHi-CDatabases GeneticGeneticsTranscriptional regulationHumansQuality (business)EnhancerControl (linguistics)Genetics (clinical)media_commonGenomeChromosome MappingComputational BiologyHigh-Throughput Nucleotide SequencingQuality controlGenomicsChromatin004Chromatinlcsh:Genetics030104 developmental biology030220 oncology & carcinogenesis
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Different Brain Circuitries Mediating Controllable and Uncontrollable Pain.

2015

Uncontrollable, compared with controllable, painful stimulation can lead to increased pain perception and activation in pain-processing brain regions, but it is currently unknown which brain areas mediate this effect. When pain is controllable, the lateral prefrontal cortex (PFC) seems to inhibit pain processing, although it is unclear how this is achieved. Using fMRI in healthy volunteers, we examined brain activation during controllable and uncontrollable stimulation to answer these questions. In the controllable task, participants self-adjusted temperatures applied to their hand of pain or warm intensities to provoke a constant sensation. In the uncontrollable task, the temperature time …

0301 basic medicineAdultMaleNociceptionAdolescentPainPrefrontal CortexStimulus (physiology)AnxietyBrain mappingbehavioral disciplines and activities03 medical and health sciencesYoung Adult0302 clinical medicineSensationmedicineHumansThermosensingPrefrontal cortexAnterior cingulate cortexInternal-External ControlPain MeasurementCerebral CortexBrain MappingGeneral NeuroscienceBrainArticlesMagnetic Resonance ImagingHealthy VolunteersDorsolateral prefrontal cortex030104 developmental biologymedicine.anatomical_structureNociceptionFemaleNerve NetPsychologyInsulaNeuroscience030217 neurology & neurosurgerypsychological phenomena and processesThe Journal of neuroscience : the official journal of the Society for Neuroscience
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Vestibular thalamus: Two distinct graviceptive pathways.

2015

Objective: To determine whether there are distinct thalamic regions statistically associated with either contraversive or ipsiversive disturbance of verticality perception measured by subjective visual vertical (SVV). Methods: We used modern statistical lesion behavior mapping on a sample of 37 stroke patients with isolated thalamic lesions to clarify which thalamic regions are involved in graviceptive otolith processing and whether there are distinct regions associated with contraversive or ipsiversive SVV deviation. Results: We found 2 distinct systems of graviceptive processing within the thalamus. Contraversive tilt of SVV was associated with lesions to the nuclei dorsomedialis, intrala…

0301 basic medicineAdultMaleStroke patientNerve netThalamusBiologyBrain mappingFunctional LateralityLesion03 medical and health sciences0302 clinical medicineThalamusmedicineHumansAgedVestibular systemBrain MappingMiddle AgedStroke030104 developmental biologymedicine.anatomical_structureVestibuleSpace PerceptionFemaleNeurology (clinical)Vestibule Labyrinthmedicine.symptomNerve NetNeuroscience030217 neurology & neurosurgeryThalamic lesionsNeurology
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