Search results for "mes"

showing 10 items of 23665 documents

Topological congruence between phylogenies of Anacanthorus spp. (Monogenea: Dactylogyridae) and their Characiformes (Actinopterygii) hosts: A case of…

2017

Cophylogenetic studies aim at testing specific hypotheses to understand the nature of coevolving associations between sets of organisms, such as host and parasites. Monogeneans and their hosts provide and interesting platform for these studies due to their high host specificity. In this context, the objective of the present study was to establish whether the relationship between Anacanthorus spp. with their hosts from the upper Paraná River and its tributaries can be explained by means of cospeciation processes. Nine fish species and 14 monogenean species, most of them host specific, were studied. Partial DNA sequences of the genes RAG1, 16S and COI of the fish hosts and of the genes ITS2, …

0106 biological sciences0301 basic medicineSpeciationlcsh:MedicineAnimal PhylogeneticsCharaciformes01 natural sciencesDatabase and Informatics MethodsRNA Ribosomal 16Slcsh:ScienceDNA extractionPhylogenyData ManagementMultidisciplinaryGeographyPhylogenetic treebiologyEukaryotaPhylogenetic AnalysisPhylogeneticsFreshwater FishPhylogeographyBiogeographyVertebratesCharaciformesSequence AnalysisMonogeneaResearch ArticleComputer and Information SciencesEvolutionary ProcessesBioinformaticsContext (language use)Topology010603 evolutionary biologyHost-Parasite InteractionsElectron Transport Complex IV03 medical and health sciencesExtraction techniquesPhylogeneticsGeneticsAnimalsEvolutionary SystematicsParasite EvolutionTaxonomyHomeodomain ProteinsEvolutionary BiologyPopulation BiologyHost (biology)lcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesDNASequence Analysis DNAbiology.organism_classificationDactylogyridaeResearch and analysis methodsPhylogeographyFish030104 developmental biologyPlatyhelminthsEarth Scienceslcsh:QParasitologyZoologySequence AlignmentPopulation GeneticsPLOS ONE
researchProduct

Is the ballan wrasse (Labrus bergylta) two species? Genetic analysis reveals within-species divergence associated with plain and spotted morphotype f…

2016

Abstract The ballan wrasse (Labrus bergylta) is a marine fish belonging to the family Labridae characterized by 2 main morphotypes that occur in sympatry: spotty and plain. Previous studies have revealed differences in their life‐history traits, such as growth and maturation; however, the genetic relationship between forms is presently unknown. Using 20 recently developed microsatellite markers, we conducted a genetic analysis of 41 and 48 spotty and plain ballan wrasse collected in Galicia (northwest Spain). The 2 morphotypes displayed highly significant genetic differences to each other (F ST = 0.018, P < 0.0001). A similar degree of genetic differentiation (F ST = 0.025, P < 0.0001) was …

0106 biological sciences0301 basic medicineSympatryballan wrasseShort CommunicationZoologyGenetic relationshipLabrus bergyltaDNA Mitochondrial010603 evolutionary biology01 natural sciencesGenetic analysismicrosatellitesPerciformes03 medical and health sciencesAnimalsbiologyGenetic heterogeneitycolor morphotypesSequence Analysis DNALabrus bergyltabiology.organism_classificationPerciformesSympatry030104 developmental biologyspeciationSpainWrasseMicrosatelliteAnimal Science and ZoologyMicrosatellite RepeatsIntegrative Zoology
researchProduct

Improved sampling at the subspecies level solves a taxonomic dilemma – A case study of two enigmatic Chinese tit species (Aves, Passeriformes, Parida…

2017

Abstract A recent full species-level phylogeny of tits, titmice and chickadees (Paridae) has placed the Chinese endemic black-bibbed tit (Poecile hypermelaenus) as the sister to the Palearctic willow tit (P. montanus). Because this sister-group relationship is in striking disagreement with the traditional affiliation of P. hypermelaenus close to the marsh tit (P. palustris) we tested this phylogenetic hypothesis in a multi-locus analysis with an extended taxon sampling including sixteen subspecies of willow tits and marsh tits. As a taxonomic reference we included type specimens in our analysis. The molecular genetic study was complemented with an analysis of biometric data obtained from mu…

0106 biological sciences0301 basic medicineSystematicsChinaZoologySubspeciesDNA Mitochondrial010603 evolutionary biology01 natural sciences03 medical and health sciencesSpecies SpecificityWillow titGeneticsAnimalsDNA Barcoding TaxonomicPasseriformesMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsbiologyPhylogenetic treebiology.organism_classificationPoecile hypermelaenusPhylogeography030104 developmental biologyTaxonGenetic LociPoecileTaxonomy (biology)Molecular Phylogenetics and Evolution
researchProduct

Contrasting biogeographical patterns in Margarella (Gastropoda: Calliostomatidae: Margarellinae) across the Antarctic Polar Front

2021

International audience; Members of the trochoidean genus Margarella (Calliostomatidae) are broadly distributed across Antarctic and sub-Antarctic ecosystems. Here we used novel mitochondrial and nuclear gene sequences to clarify species boundaries and phylogenetic relationships among seven nominal species distributed on either side of the Antarctic Polar Front (APF). Molecular reconstructions and species-delimitation analyses recognized only four species: M. antarctica (the Antarctic Peninsula), M. achilles (endemic to South Georgia), M. steineni (South Georgia and Crozet Island) and the morphologically variable M. violacea (=M. expansa, M. porcellana and M. pruinosa), with populations in s…

0106 biological sciences0301 basic medicineTime FactorsAntarctic Polar FrontGastropodalong-distance dispersalAntarctic RegionsBiology010603 evolutionary biology01 natural sciencesDNA MitochondrialPorcellanaCalliostomatidae03 medical and health sciencesSpecies SpecificityGastropodaGeneticsAnimals14. Life underwaterGlacial periodMargarellaSouthern OceanMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyPolar frontGenetic diversityPolymorphism GeneticEcologyBayes TheoremDNA15. Life on landSouth Americabiology.organism_classificationbenthic-protected developmentraftingPhylogeographyMESH: Océan Austral front polaire antarctique dispersion à longue distance développement protégé benthique incubation rafting Margarella030104 developmental biologyBiological dispersalTaxonomy (biology)[SDE.BE]Environmental Sciences/Biodiversity and Ecology
researchProduct

Variable crab camouflage patterns defeat search image formation.

2021

Understanding what maintains the broad spectrum of variation in animal phenotypes and how this influences survival is a key question in biology. Frequency dependent selection – where predators temporarily focus on one morph at the expense of others by forming a “search image” – can help explain this phenomenon. However, past work has never tested real prey colour patterns, and rarely considered the role of different types of camouflage. Using a novel citizen science computer experiment that presented crab “prey” to humans against natural backgrounds in specific sequences, we were able to test a range of key hypotheses concerning the interactions between predator learning, camouflage and mor…

0106 biological sciences0301 basic medicineTime FactorsComputer scienceQH301-705.5BrachyuraBehavioural ecologyFrequency-dependent selectionMedicine (miscellaneous)ColorVariation (game tree)010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyArticlePredationtaskuravut03 medical and health sciencesDisruptive colorationCitizen scienceAnimalsHumansexperimental evolutionBiology (General)muuntelu (biologia)PredatorEcosystemsuojaväriMechanism (biology)Pigmentationbehavioural ecologyAdaptation Physiological030104 developmental biologyPhenotypeVideo GamesExperimental evolutionEvolutionary biologyCamouflagePattern Recognition PhysiologicalPredatory BehaviorfenotyyppiGeneral Agricultural and Biological SciencesColor PerceptionCommunications biology
researchProduct

Polyamine Oxidase 5 loss-of-function mutations in Arabidopsis thaliana trigger metabolic and transcriptional reprogramming and promote salt stress to…

2017

The family of polyamine oxidases (PAO) in Arabidopsis (AtPAO1-5) mediates polyamine (PA) back-conversion, which reverses the PA biosynthetic pathway from spermine, and its structural isomer thermospermine (tSpm), into spermidine and then putrescine. Here, we have studied the involvement of PA back-conversion in Arabidopsis salinity tolerance. AtPAO5 is the Arabidopsis PAO gene member most transcriptionally induced by salt stress. Two independent loss-of-function mutants (atpao5-2 and atpao5-3) were found to exhibit constitutively higher tSpm levels, with associated increased salt tolerance. Using global transcriptional and metabolomic analyses, the underlying mechanisms were studied. Stimul…

0106 biological sciences0301 basic medicineTranscription GeneticArabidopsis thalianaPhysiologyArabidopsisSperminePlant ScienceSodium Chloride01 natural scienceschemistry.chemical_compoundGene Expression Regulation PlantLoss of Function MutationArabidopsisPolyaminesMetabolitesArabidopsis thalianaPoliaminesAbscisic acidPrincipal Component AnalysisbiologyAgricultural SciencesSalt ToleranceMetabòlitsmetabolomicsPhenotypeBiochemistryMultigene FamilyMetabolomeCitric Acid CycleSalsCyclopentanes03 medical and health sciencesStress PhysiologicalOxylipinsRNA MessengerIonssalt toleranceArabidopsis ProteinsGene Expression ProfilingSodiumHydrogen PeroxideAgriculture Forestry and Fisheriesbiology.organism_classificationSpermidineGene Ontology030104 developmental biologychemistrythermosperminePutrescineSpermineSaltsOxidoreductases Acting on CH-NH2 Group DonorsTranscriptomejasmonatesPolyaminePolyamine oxidaseAbscisic Acid010606 plant biology & botany
researchProduct

Technical Note on the quality of DNA sequencing for the molecular characterisation of genetically modified plants

2018

Abstract As part of the risk assessment (RA) requirements for genetically modified (GM) plants, according to Regulation (EU) No 503/2013 and the EFSA guidance on the RA of food and feed from GM plants (EFSA GMO Panel, 2011), applicants need to perform a molecular characterisation of the DNA sequences inserted in the GM plant genome. The European Commission has mandated EFSA to develop a technical note to the applicants on, and checking of, the quality of the methodology, analysis and reporting covering complete sequencing of the insert and flanking regions, insertion site analysis of the GM event, and generational stability and integrity. This Technical Note puts together requirements and r…

0106 biological sciences0301 basic medicineVeterinary (miscellaneous)[SDV]Life Sciences [q-bio]2405 Parasitologymolecularcharacterisationnext‐generation sequencingContext (language use)Plant ScienceComputational biologyGenetically modified cropsBiology01 natural sciencesMicrobiologyGenomeInsert (molecular biology)DNA sequencing03 medical and health sciencessymbols.namesake1110 Plant Sciencegenetically modified organismgenetic stabilityDNA sequencing1106 Food ScienceSanger sequencinggenetically modified organisms2404 Microbiologyrisk assessmentmolecular characterisation10079 Institute of Veterinary Pharmacology and ToxicologyGenetically modified organism3401 Veterinary (miscellaneous)Scientific Opinion030104 developmental biologyNGSsymbols570 Life sciences; biologyAnimal Science and ZoologyParasitologynext-generation sequencing1103 Animal Science and Zoology010606 plant biology & botanyFood ScienceVerification and validation
researchProduct

Symptom severity, infection progression and plant responses in solanum plants caused by three pospiviroids vary with the inoculation procedure

2021

This article belongs to the Section Molecular Plant Sciences.

0106 biological sciences0301 basic medicineViroidvirusesPospiviroidaeCEVd01 natural sciencesRibosome18S ribosomal RNAAgro-infiltrationSolanum lycopersicumBiology (General)Spectroscopyfood and beveragesGeneral MedicinePSTVdTranscriptRibosomeViroidsComputer Science Applications02.- Poner fin al hambre conseguir la seguridad alimentaria y una mejor nutrición y promover la agricultura sostenibleChemistryRNA ViralPlasmidsQH301-705.5PospiviroidaeBiologyEggplantStressArticleCatalysisTomatoMicrobiologyInorganic Chemistry03 medical and health sciencesBIOQUIMICA Y BIOLOGIA MOLECULARPhysical and Theoretical ChemistryQD1-999Molecular BiologyPotato spindle tuber viroidPlant DiseasesInoculationOrganic ChemistryfungiRibosomal RNAbiology.organism_classification030104 developmental biologyTCDVdSolanumRibosomes010606 plant biology & botany
researchProduct

Reaction norms of host immunity, host fitness and parasite performance in a mouse - intestinal nematode interaction.

2016

8 pages; International audience; The outcome of the encounter between a host and a parasite depends on the synergistic effects of the genetics of the two partners and the environment (sensulato) where the interaction takes place. Reaction norms can depict how host and parasite traits vary across environmental ranges for different genotypes. Here, we performed a large scale experiment where three strains of laboratory mice (SJL, BALB/c and CBA) were infected with four doses of the intestinal nematode Heligmosomoides polygyrus. An increasing infective dose can be considered as a proxy for the environment-dependent risk incontracting the infection. We looked at the fitness traits of hosts and …

0106 biological sciences0301 basic medicine[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyResistanceHeligmosomoides polygyrusBiologyPlant disease resistance010603 evolutionary biology01 natural sciencesHost-Parasite Interactions03 medical and health sciencesImmune systemImmunityGenotypeFitness[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsParasite hosting[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyIntestinal Diseases ParasiticDisease ResistanceStrongylida InfectionsMice Inbred BALB CNematospiroides dubiusMus musculus domesticus[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyImmunitybiology.organism_classificationInterleukin 10030104 developmental biologyInfectious DiseasesParasitologySusceptibilityImmunologyMice Inbred CBACytokinesFemaleParasitologyHeligmosomoides polygyrus[SDE.BE]Environmental Sciences/Biodiversity and EcologyReaction normsTolerance[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
researchProduct

Unravelling the scientific debate on how to address wolf-dog hybridization in Europe

2019

Anthropogenic hybridization is widely perceived as a threat to the conservation of biodiversity. Nevertheless, to date, relevant policy and management interventions are unresolved and highly convoluted. While this is due to the inherent complexity of the issue, we hereby hypothesize that a lack of agreement concerning management goals and approaches, within the scientific community, may explain the lack of social awareness on this phenomenon, and the absence of effective pressure on decision-makers. By focusing on wolf x dog hybridization in Europe, we hereby (a) assess the state of the art of issues on wolf x dog hybridization within the scientific community, (b) assess the conceptual base…

0106 biological sciences0301 basic medicineconservation; delphi technique; genetic admixture; introgression; lethal removal; management; ethics; values in sciencelethal removallcsh:EvolutionPsychological interventionDelphi methodConservation; Delphi technique; Ethics; Genetic admixture; Introgression; Lethal removal; Management; Values in science;01 natural sciencesHYBRIDSATLANTIC SALMONlcsh:QH359-425ComputingMilieux_MISCELLANEOUSEcologyINTROGRESSIONconservationPublic relationsViewpointsConservation; Delphi technique; Ethics; Genetic admixture; Introgression; Lethal removal; Management; Values in scienceADMIXTUREDOMESTIC DOGSIdentification (biology)C180 EcologyDisciplinemanagementDETECTING HYBRIDIZATIONCONSERVATIONintrogressionC170 Population Biology010603 evolutionary biology03 medical and health sciencesWOLVESlcsh:QH540-549.5Political scienceValues in scienceMANAGEMENTSocial consciousnessEcology Evolution Behavior and SystematicsEthicsC300 Zoologybusiness.industryInterpretation (philosophy)C182 Evolutionconservation ; delphi technique ; genetic admixture ; introgression ; lethal removal ; management ; ethics ; values in science15. Life on landethics030104 developmental biologyConceptual frameworklcsh:Ecologydelphi techniquevalues in science[SDE.BE]Environmental Sciences/Biodiversity and EcologyCONSENSUSbusinessgenetic admixture
researchProduct