Search results for "methods"

showing 10 items of 4526 documents

Experimental and theoretical investigations for the regio and stereoselective transformation of trans 1,2,3-trisubstituted aziridines into trans oxaz…

2003

The regio and stereoselective transformation of trans 1,2,3-trisubstituted aziridines into trans oxazolidin-2-ones takes place in good yield. However, the cis configuration at C2 and C3 in monocyclic aziridines is a limiting factor for this transformation. Ab initio calculations show that while the ring-opening process assisted by iodide is regioselective, the subsequent ring-closure is responsible for the retention of the configuration at the trans oxazolidin-2-ones. The larger energy found for the ring-closure process for the cis aziridines accounts for the non-formation of the cis oxazolidin-2-ones.

chemistry.chemical_classificationRegiochemistryStereochemistryOrganic ChemistryIodideStereoselective synthesisRegioselectivityBiochemistrychemistryAb initio quantum chemistry methodsYield (chemistry)Drug DiscoveryMolecular mechanismStereoselectivityCis–trans isomerismTetrahedron
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Experimental and estimated saturated vapour pressures of aroma compounds

1999

Abstract The saturated vapour pressure of d-linalool, 2-nonanone, d-limonene and isoamyl acetate were measured using a static method at different temperatures from 223 to 468 K. From the experimental values, Antoine's constants were determined to enable the calculations of the saturated vapour pressures at a given temperature. The saturated vapour pressure of the four aroma compounds at 298 K were respectively 27, 59, 200 and 733 Pa. These results were compared with those obtained using different estimation methods (Antoine–Grain, Watson, Lee–Kesler, Gomez–Thodos, Grain and Mackay). Gomez–Thodos' model was found to be the most accurate method for the estimation of the saturated vapour press…

chemistry.chemical_classificationbiologyPhase equilibriumVapor pressureGeneral Chemical EngineeringIsoamyl acetateGeneral Physics and AstronomyThermodynamicsbiology.organism_classificationchemistry.chemical_compoundchemistryVapor qualityOrganic chemistryVolatile organic compoundPhysical and Theoretical ChemistryEstimation methodsAromaFluid Phase Equilibria
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Stereoelectronic properties ofN-acetyl-α,β-dehydroamino acidN′-methylamides

1998

α,β-Dehydroamino acids are useful peptide modifiers. However, their stereoelectronic properties still remain insufficiently recognized. Based on FTIR experiments in the range ofvs(N-H), AI, AII andvs(Cα=Cβ) and ab initio calculations with B3LYP/6–31G*, we studied the solution conformational preferences and the amide electron density perturbation of Ac-ΔXaa-NHMe, where ΔXaa=ΔAla, (E)-ΔAbu, (Z)-ΔAbu, (Z)-ΔLeu, (Z)-ΔPhe and ΔVal. Each of these dehydroamides adopts a C5 structure, which in Ac-ΔAla-NHMe is fully extended and accompanied by the strong C5 hydrogen bond. Interaction with bond Cα=Cβ lessens the amidic resonance within the flanking amide groups. TheN-terminal C=O bond is noticeably s…

chemistry.chemical_classificationchemistry.chemical_compoundchemistryStereochemistryAb initio quantum chemistry methodsHydrogen bondAmidePharmacology toxicologyPeptide bondDensity functional theoryPeptideBiochemistryAmide bondsLetters in Peptide Science
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Why Are Some Enzymes Dimers? Flexibility and Catalysis in Thermotoga maritima Dihydrofolate Reductase

2019

[Image: see text] Dihydrofolate reductase from Thermotoga maritima (TmDFHFR) is a dimeric thermophilic enzyme that catalyzes the hydride transfer from the cofactor NADPH to dihydrofolate less efficiently than other DHFR enzymes, such as the mesophilic analogue Escherichia coli DHFR (EcDHFR). Using QM/MM potentials, we show that the reduced catalytic efficiency of TmDHFR is most likely due to differences in the amino acid sequence that stabilize the M20 loop in an open conformation, which prevents the formation of some interactions in the transition state and increases the number of water molecules in the active site. However, dimerization provides two advantages to the thermophilic enzyme: …

chemistry.chemical_classificationenzyme kinetic isotope effectsbiology010405 organic chemistryStereochemistryChemistryThermophilefree energy calculationsGeneral Chemistry010402 general chemistrybiology.organism_classificationenzyme dimers01 natural sciencesCatalysisCofactor0104 chemical sciencesCatalysisEnzymeDihydrofolate ReductaseThermotoga maritimaDihydrofolate reductasebiology.proteinbacteriaQM/MM methods
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ChemInform Abstract: Chemical Compounds and Toxicological Assessments of Drinking Water Stored in Polyethylene Terephthalate (PET) Bottles: A Source …

2012

A declaration of conformity according to European regulation No. 10/2011 is required to ensure the safety of plastic materials in contact with foodstuffs. This regulation established a positive list of substances that are authorized for use in plastic materials. Some compounds are subject to restrictions and/or specifications according to their toxicological data. Despite this, the analysis of PET reveals some non-intentionally added substances (NIAS) produced by authorized initial reactants and additives. Genotoxic and estrogenic activities in PET-bottled water have been reported. Chemical mixtures in bottled water have been suggested as the source of these toxicological effects. Furthermo…

chemistry.chemical_compoundChemical mixturesChemistryEnvironmental chemistryExtraction (chemistry)Plastic materialsPolyethylene terephthalateExtraction methodsSample preparationGeneral MedicineContaminationBottled waterChemInform
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(1Z,3Z)-1,4-Di(pyridin-2-yl)buta-1,3-diene-2,3-diol:  The Planar Highly Conjugated Symmetrical Enediol with Multiple Intramolecular Hydrogen Bonds

2002

1H, (13)C, and (15)N NMR spectral data show that in chloroform solution (1Z,3Z)-1,4-di(pyridin-2-yl)buta-1,3-diene-2,3-diol, OO, is in ca. 9:1 equilibrium with (3Z)-3-hydroxy-1,4-di(pyridin-2-yl)but-3-en-2-one, OK, while no 1,4-di(pyridin-2-yl)-2,3-butanedione, KK, was detected. The species present in the tautomeric mixture were identified by comparing their experimental chemical shifts with those known for similar compounds as well as with the theoretically calculated (GIAO-HF/DFT) values. Ab initio calculations show that OK and especially the highly conjugated OO forms are preferred in the tautomeric mixtures both in vacuo and in chloroform solution. Comparison of experimental (Arrhenius)…

chemistry.chemical_compoundCrystallographyDienechemistryHydrogen bondComputational chemistryAb initio quantum chemistry methodsIntramolecular forceOrganic ChemistryDiolAb initioMoleculeTautomerThe Journal of Organic Chemistry
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1981

A new interferometer has been designed in order to perform measurements of refractive indices and refractive index increments on liquid systems under elevated pressure at different temperatures. The method of measurement, the calibration of the instrument and the treatment of data are described. With a series of test measurements on trans-decalin it is shown that with this instrument reliable results are obtained.

chemistry.chemical_compoundInterferometryTemperature and pressureOpticsMaterials scienceDecalinchemistrybusiness.industryAstrophysics::Instrumentation and Methods for AstrophysicsCalibrationFunction (mathematics)businessRefractive indexDie Makromolekulare Chemie
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Die acidolytische depolymerisation von trioxan in stationärer phase. 21. Mitt. über polyoxymethylene1

1964

Die Depolymerisation von Trioxan mit verschiedenen Phosphorsauren wurde im Temperaturbereich von 100–160°C untersucht. Sie fuhrt zu einem temperaturabhangigen Gleichgewicht zwischen Trioxan und Formaldehyd, das oberhalb 180°C weitgehend auf der Seite des Formaldehyds liegt. Zu einer schnellen Einstellung des Gleichgewichtes eignen sich Ortho- und Pyrophosphorsaure. Die bevorzugte Nebenreaktion ist die Bildung von Methylformiat; die Ausbeute an Methylformiat wird durch Erhohung der Reaktionszeit und der Katalysatoroberflache vergrosert. Das geschilderte Verfahren eignet sich zur Darstellung von monomerem Formaldehyd (Reinheitsgrad etwa 99,8%) im Laboratorium. Depolymerization of trioxane by …

chemistry.chemical_compoundLaboratory methodsMonomerchemistryTrioxaneDepolymerizationMethyl formatePolymer chemistryFormaldehydeSide reactionCatalysisDie Makromolekulare Chemie
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An Accurate Quartic Force Field and Fundamental Frequencies for the Ozonide Anion: A Rare Positive Anharmonicity for the Antisymmetric Stretch

2003

The CCSD(T) method has been used to compute a highly accurate quartic force field and fundamental frequencies for all 16O and 18O isotopomers of the ozonide anion. The CCSD and CASPT2 methods have also been used to verify the reliability of the CCSD(T) fundamental frequencies. The computed fundamental frequencies are in agreement with gas-phase experiments, but disagree with matrix isolation experiments for the antisymmetric stretch, ν3. CASPT2 calculations show that the antisymmetric part of the O3- potential surface is sensitive to the external environment. It is concluded that the antisymmetric stretch exhibits a significant matrix shift in the matrix isolation experiments and that the m…

chemistry.chemical_compoundMatrix (mathematics)chemistryComputational chemistryAb initio quantum chemistry methodsForce field (physics)Antisymmetric relationQuartic functionAnharmonicityMatrix isolationOzonideGeneral ChemistryMolecular physicsCollection of Czechoslovak Chemical Communications
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Crystal structure and reactivity of 2-chloro-3,5-dinitrothiophene and of 2-phenylsulphonyl-3,5-dinitrothiophene with nucleophiles

1988

The geometry obtained by a crystal structure determination of the title compounds, as compared with that of the analogous benzene derivatives, along with results of ab initio calculations, is used to interpret the different SNAr reactivities in some thiophene and benzene compounds. The smaller rotation of the nitro groups with respect to the aromatic rings observed in thiophene derivatives should be considered a relevant factor in the higher reactivity in the thiophene series.

chemistry.chemical_compoundNucleophileAb initio quantum chemistry methodsNucleophilic aromatic substitutionChemistryOrganic ChemistryThiopheneOrganic chemistryReactivity (chemistry)AromaticityCrystal structureBenzeneMedicinal chemistryJournal of Heterocyclic Chemistry
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