Search results for "microbes"

showing 10 items of 27 documents

The responses of shoot-root-rhizosphere continuum to simultaneous fertilizer addition, warming, ozone and herbivory in young Scots pine seedlings in …

2017

Abstract It is not clear how climate change in combination with increasing soil nitrogen availability and herbivory affects boreal forests, the largest terrestrial biome in the world. In this study, Scots pine ( Pinus sylvestris ) seedlings were exposed to moderate warming (ca. 1 °C), 1.5 × ambient ozone (O 3 ) concentration, fertilizer addition (120 kg N ha −1 yr −1 ) and shoot herbivory by pine sawfly ( Acantholyda posticalis ) alone and in combination. We measured fine root morphology, mycorrhizal colonization level, root fungal biomass (ergosterol), rhizosphere emission of biogenic volatile organic compounds (BVOCs), and microbial biomass (PLFAs) in the rhizosphere soil as well as seedl…

0106 biological sciences010504 meteorology & atmospheric sciencesField experimentSoil Sciencebiogenic volatile organic compounds (BVOCs)engineering.material01 natural sciencesMicrobiologyectomycorrhizasoil microbesmikrobitorgaaniset yhdisteet0105 earth and related environmental sciencesAbiotic componentmaaperäRhizospherebiologyScots pinegrowth allocationilmastonmuutokset15. Life on landbiology.organism_classificationEctomycorrhizaclimate changegreat web-spinning pine sawflyAgronomy13. Climate actionSeedlingShootengineeringta1181Fertilizer010606 plant biology & botanySoil Biology and Biochemistry
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Trichoderma harzianum Strain T22 Modulates Direct Defense of Tomato Plants in Response to Nezara viridula Feeding Activity

2021

AbstractPlant growth-promoting fungi belonging to genus Trichoderma are known to help plants when dealing with biotic stressors by enhancing plant defenses. While beneficial effects of Trichoderma spp. against plant pathogens have long been documented, fewer studies have investigated their effect on insect pests. Here, we studied the impact of Trichoderma root colonization on the plant defense responses against stink bug feeding attack. For this purpose, a model system consisting of tomato plant, Solanum lycopersicum cv Dwarf San Marzano, Trichoderma harzianum strain T22 and the southern green stink bug, Nezara viridula, was used. We firstly determined stink bug performance in terms of rela…

0106 biological sciences0301 basic medicineTime FactorsTranscription GeneticGreen stink bugBeneficial soil microbes Jasmonic acid signaling pathway Pentatomidae Solanum lycopersicum Stink bugsCyclopentanesGenes PlantPlant Roots01 natural sciencesBiochemistryArticleHeteroptera03 medical and health scienceschemistry.chemical_compoundSolanum lycopersicumGene Expression Regulation PlantPentatomidaePlant defense against herbivoryAnimalsHerbivoryOxylipinsSymbiosisStink bugsEcology Evolution Behavior and SystematicsbiologyBeneficial soil microbesJasmonic acidfungifood and beveragesTrichoderma harzianumGeneral MedicinePentatomidaebiology.organism_classificationHorticulture030104 developmental biologychemistryNezara viridulaJasmonic acid signaling pathwayTrichodermaHypocrealesSeedsFemaleSolanumSignal Transduction010606 plant biology & botany
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Combining molecular microbial ecology with ecophysiology and plant genetics for a better understanding of plant-microbial communities' interactions i…

2013

18 pages; International audience

0106 biological sciencesEcophysiologyquantitative geneticsecophysiologyPlant genetics[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil studyBiology[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study01 natural sciences03 medical and health sciencesplant–microbes interactionsMicrobial ecologyBotany[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisComputingMilieux_MISCELLANEOUS030304 developmental biology2. Zero hunger0303 health sciencesRhizosphere[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyEcologymodelingQuantitative geneticsMicrobial population biology[SDE.BE]Environmental Sciences/Biodiversity and Ecologymicrobial communityrhizosphere010606 plant biology & botany[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Chlamyphilone, a Novel Pochonia chlamydosporia Metabolite with Insecticidal Activity

2019

Metabolites from a collection of selected fungal isolates have been screened for insecticidal activity against the aphid Acyrthosiphon pisum. Crude organic extracts of culture filtrates from six fungal isolates (Paecilomyces lilacinus, Pochonia chlamydosporia, Penicillium griseofulvum, Beauveria bassiana, Metarhizium anisopliae and Talaromyces pinophilus) caused mortality of aphids within 72 h after treatment. In this work, bioassay-guided fractionation has been used to characterize the main bioactive metabolites accumulated in fungal extracts. Leucinostatins A, B and D represent the bioactive compounds produced by P. lilacinus. From P. griseofulvum and B. bassiana extracts, griseofulvin an…

0106 biological sciencesPenicillium griseofulvumInsecticidesMagnetic Resonance SpectroscopyMetabolitePharmaceutical ScienceMetarhizium anisopliaeBeauveria bassianabeneficial microbesBassiana01 natural sciencesArticleAnalytical Chemistrylcsh:QD241-441chemistry.chemical_compoundAscomycotalcsh:Organic chemistryDrug DiscoveryFood sciencePhysical and Theoretical ChemistryBiological ProductsbiologyMolecular Structure010405 organic chemistryChemistrysecondary metabolitesOrganic Chemistryfungifood and beveragespea aphidbiology.organism_classificationGriseofulvinazaphilonesBeauvericin0104 chemical sciencesAcyrthosiphon pisum010602 entomologybeneficial microbesChemistry (miscellaneous)Molecular Medicinesecondary metabolites; beneficial microbes; pea aphid; azaphilonesMolecules
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Effects of alternative electron acceptors on the activity and community structure of methane-producing and consuming microbes in the sediments of two…

2017

The role of anaerobic CH4 oxidation in controlling lake sediment CH4 emissions remains unclear. Therefore, we tested how relevant EAs (SO42−, NO3−, Fe3+, Mn4+, O2) affect CH4 production and oxidation in the sediments of two shallow boreal lakes. The changes induced to microbial communities by the addition of Fe3+ and Mn4+ were studied using next-generation sequencing targeting the 16S rRNA and methyl-coenzyme M reductase (mcrA) genes and mcrA transcripts. Putative anaerobic CH4-oxidizing archaea (ANME-2D) and bacteria (NC 10) were scarce (up to 3.4% and 0.5% of archaeal and bacterial 16S rRNA genes, respectively), likely due to the low environmental stability associated with shallow depths.…

0301 basic medicineGeologic SedimentsMicroorganism116 Chemical sciencessedimentitApplied Microbiology and BiotechnologyRNA Ribosomal 16SMagnesiummikrobitoksidantitchemistry.chemical_classificationoxidantsEcologybiologyEcologymethane oxidationsedimentshapettuminenmethanogenesismcrAEnvironmental chemistrymicrobesOxidoreductasesMethaneOxidation-ReductionoxidationMethanogenesisIronta1172030106 microbiologyElectronsMethanobacteriajärvetmetaaniMicrobiology03 medical and health sciencesOrganic matter16S rRNAMicrobial biodegradationlakeBacteriata1183Carbon Dioxidebiology.organism_classificationArchaeaLakessedimentchemistry13. Climate actionAnaerobic oxidation of methaneBacteriaArchaeaFEMS Microbiology Ecology
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Seasonal and spatial dynamics of enteric viruses in wastewater and in riverine and estuarine receiving waters

2018

International audience; Enteric viruses represent a global public health threat and are implicated in numerous foodborne andwaterborne disease outbreaks. Nonetheless, relatively little is known of their fate and stability in the environment. In this studywe used carefully validatedmethods tomonitor enteric viruses, namely adenovirus (AdV), JC polyomavirus (JCV), noroviruses (NoVs), sapovirus (SaV) and hepatitis A and E viruses (HAV and HEV) fromwastewater source to beaches and shellfish beds. Wastewater influent and effluent, surface water, sediment and shellfish samples were collected in the Conwy catchment (North Wales, UK) once a month for one year. High concentrations of AdV and JCV wer…

0301 basic medicineVeterinary medicineviruses010501 environmental sciencesWastewater01 natural sciencesWaste Disposal Fluid[SDV.IDA]Life Sciences [q-bio]/Food engineeringhuman adenovirusWaste Management and Disposalmurine norovirusbiologyhepatitis-eWaterborne diseasesvirus diseasesContaminationHepatitis EPollution6. Clean water3. Good healthqPCRWastewaterHealthdiverse microbes[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/VirologySeasonsWater MicrobiologyTangential flow ultrafiltrationEnvironmental MonitoringPorcine gastric mucin assayEnvironmental Engineering030106 microbiologydrinking-waterblood group antigensViral survival03 medical and health sciencesEnteric virus trackingmedicineEnvironmental ChemistryEffluentShellfish0105 earth and related environmental scienceshuman polyomavirusviral gastroenteritisWater PollutionOutbreakSapovirusFaecal contaminationbiology.organism_classificationmedicine.diseaseBiology and Microbiologyporcine gastric mucinsimultaneous recovery
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The janus face of NKT cell function in autoimmunity and infectious diseases

2018

Natural killer T cells (NKT) are a subset of T lymphocytes bridging innate and adaptive immunity. These cells recognize self and microbial glycolipids bound to non-polymorphic and highly conserved CD1d molecules. Three NKT cell subsets, type I, II and NKT-like expressing different antigen receptors (TCR) were described and TCR activation promotes intracellular events leading to specific functional activities. NKT can exhibit different functions depending on the secretion of soluble molecules and the interaction with other cell types. NKT cells act as regulatory cells in the defence against infections but, on the other hand, their effector functions can be involved in the pathogenesis of sev…

0301 basic medicineglycolipidsAutoimmunityReviewAdaptive Immunitymedicine.disease_causeAutoimmunityCatalysiimmunologylcsh:Chemistry0302 clinical medicineT-Lymphocyte Subsetslcsh:QH301-705.5SpectroscopyInnate lymphoid cellhemic and immune systemsComputer Science Applications1707 Computer Vision and Pattern RecognitionGeneral MedicineNKTNatural killer T cellAcquired immune systemComputer Science ApplicationsCell biologyCD1DmicrobesCell typechemical and pharmacologic phenomenaGlycolipidBiologyCD1dCommunicable DiseasesCatalysisInorganic Chemistry03 medical and health sciencesmedicineAnimalsHumansMicrobePhysical and Theoretical ChemistryMolecular BiologyInflammationT-cell receptorOrganic ChemistryModels ImmunologicalAlpha-galactosylceramideAlpha-galactosylceramide; Autoimmunity; CD1d; Glycolipids; Microbes; NKT; Sulfatide; Catalysis; Molecular Biology; Spectroscopy; Computer Science Applications1707 Computer Vision and Pattern Recognition; Physical and Theoretical Chemistry; Organic Chemistry; Inorganic ChemistryImmunity InnateSettore MED/16 - Reumatologia030104 developmental biologylcsh:Biology (General)lcsh:QD1-999biology.proteinNatural Killer T-CellsSulfatideCD8030215 immunology
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Native arbuscular mycorrhizal symbiosis alters foliar bacterial community composition.

2017

The effects of arbuscular mycorrhizal (AM) fungi on plant-associated microbes are poorly known. We tested the hypothesis that colonization by an AM fungus affects microbial species richness and microbial community composition of host plant tissues. We grew the grass, Deschampsia flexuosa in a greenhouse with or without the native AM fungus, Claroideoglomus etunicatum. We divided clonally produced tillers into two parts: one inoculated with AM fungus spores and one without AM fungus inoculation (non-mycorrhizal, NM). We characterized bacterial (16S rRNA gene) and fungal communities (internal transcribed spacer region) in surface-sterilized leaf and root plant compartments. AM fungus inoculat…

0301 basic medicineplant-associated microbesarbuscular mycorrhizal fungiPlant ScienceFungusBiologyPoaceaebakteerit03 medical and health sciencesMycorrhizaeBotanyGeneticsmykorritsasienetColonizationGlomeromycotaSymbiosisMolecular BiologyEcology Evolution Behavior and SystematicsFinland2. Zero hungerBacteriaInoculationMicrobiotafungiBacteroidetesfood and beverageshigh-throughput sequencingGeneral Medicinefoliar nitrogen15. Life on landbiology.organism_classificationSporePlant Leaves030104 developmental biologyMicrobial population biologyDeschampsia flexuosaProteobacteriaMycorrhiza
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Bacterial community response to changes in a tri-trophic cascade during a whole-lake fish manipulation

2015

Microbial communities play a key role in biogeochemical processes by degrading organic material and recycling nutrients, but can also be important food sources for upper trophic levels. Trophic cascades might modify microbial communities either directly via grazing or indirectly by inducing changes in other biotic or in abiotic factors (e.g., nutrients). We studied the effects of a tri-trophic cascade on microbial communities during a whole-lake manipulation in which European perch (Perca fluviatilis) were added to a naturally fishless lake divided experimentally into two basins. We measured environmental parameters (oxygen, temperature, and nutrients) and zooplankton biomass and studied th…

Abiotic componentnext generation sequencingBiomass (ecology)anaerobic microbesEcologyfungiboreal lakesBiologyZooplanktonFood chainbacterial community compositionNutrientMicrobial population biologytrophic cascadesTrophic cascadetop-down vs. bottom-up controlEcology Evolution Behavior and SystematicsTrophic level
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Arbuscular mycorrhizal fungi positively affect growth of Ailanthus altissima (Mill.) Swingle seedlings and show a strong association with this invasi…

2015

Arbuscular mycorrhizal fungi (AMF) may promote plant invasion by enhancing plant performance and competitiveness. However, only a small number of studies have considered the interactions between local soil microbial communities and invasive plants, and even fewer have focused on alien trees. Ailanthus altissima is a serious problem in the Mediterranean Basin, where it has invaded many habitats. We investigated the symbiosis between A. altissima and indigenous AMF in two invaded, ecologically different Mediterranean woodlands. Mycorrhizal infection was high at both sites (> 60% of the root fragments were mycorrhizal), indicating that A. altissima roots may be infected by AMF under different …

Ailanthus altissimaSettore AGR/05 - Assestamento Forestale E SelvicolturaEcologybiologySoil biologyfungiPlant ScienceSettore BIO/19 - Microbiologia Generalebiology.organism_classificationMediterranean BasinPlant ecologyPropaguleSymbiosisSeedlingBotanyinvasive tree species mycorrhizae plant-microbes interactions seedling growth soil biotaEcology Evolution Behavior and SystematicsWoody plantThe Journal of the Torrey Botanical Society
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