Search results for "molecular conformation"

showing 10 items of 376 documents

Stereoselective syntheses of piperidinones and their modification by organometallic coupling reactions

2007

Dehydropiperidinones stereoselectively obtained from N-arabinosyl imines were iodinated at the enaminone structure. Knochel iodine-magnesium exchange afforded Grignard compounds of these piperidinone derivatives which reacted, either directly or after transmetalation to zinc or copper intermediates, with alkyl-, aryl- or acylhalides to give correspondingly substituted piperidinones. Stereoselective conjugate allyl cuprate addition to a thus obtained 5-allyl dehydropiperidinone and ring-closing metathesis of the product gave a hydroquinolinone containing three stereogenic centers.

Chemistry OrganicMolecular ConformationStereoisomerismCrystallography X-RayMetathesisBiochemistryCoupling reactionStereocenterchemistry.chemical_compoundTransmetalationOrganometallic CompoundsOrganic chemistryMagnesiumPhysical and Theoretical ChemistryPiperidonesGroup 2 organometallic chemistryMolecular StructureChemistryArylOrganic ChemistryStereoisomerismZincModels ChemicalStereoselectivityIminesCopperIodineOrg. Biomol. Chem.
researchProduct

Why Do Chemically Similar Pharmaceutical Molecules Crystallize in Different Structures: A Case of Droperidol and Benperidol

2016

A detailed study of molecular conformation and intermolecular interactions in the experimental crystal structures and general trends observed in the Cambridge Structural Database as well as theoretical calculations were performed to identify the reason for the formation of different crystal structures of two chemically very similar pharmaceutical molecules benperidol and droperidol. The most important difference between both molecules was the weak intermolecular interactions formed by the central ring which therefore was responsible for the formation of different crystal structures. Cross-seeding experiments were performed to check the possibility for the formation of mutually isostructural…

ChemistryIntermolecular force02 engineering and technologyGeneral ChemistryCrystal structure010402 general chemistry021001 nanoscience & nanotechnologyCondensed Matter PhysicsRing (chemistry)01 natural sciencesMolecular conformation0104 chemical sciencesBenperidolCrystallographymedicineMoleculeGeneral Materials ScienceIsostructural0210 nano-technologyDroperidolmedicine.drugCrystal Growth & Design
researchProduct

Structural and spectroscopic study of the Br2...3-Br-pyridine complex by DFT calculations.

2007

Abstract The structure and the Raman vibrational spectrum of the complex Br 2 ⋯3-Br-pyridine are determined by DFT calculations using different parametrizations. The calculations are performed taking into account the effects of the dichloromethane as solvent by the CPCM method. A value of 39 kJ mol −1 for the formation enthalpy and of 1 kJ mol −1 for the formation free energy at room temperature in presence of the solvent is found. The predicted Raman spectrum is compared with the experimental one and the essential features of the spectrum are well reproduced by the B3LYP parametrization. The intensity changes of the bands when going from the free moieties to the complex are also generally …

ChemistryPyridinesEntropyEnthalpyMolecular ConformationVibrational spectrumBromineSpectrum Analysis RamanAtomic and Molecular Physics and OpticsAnalytical ChemistrySolventchemistry.chemical_compoundsymbols.namesakeModels ChemicalComputational chemistryPyridinesymbolsPhysical chemistrySolvent effectsRaman spectroscopyInstrumentationParametrizationSpectroscopyDichloromethaneSpectrochimica acta. Part A, Molecular and biomolecular spectroscopy
researchProduct

Struktur-Wirkungs-Beziehungen bei Histaminanaloga, 24. Mitt. Absolute Konfiguration und histaminartige Wirkung der Enantiomere von 4-(2-Aminopropyl)-…

1982

Es werden die Racematspaltung von 4-(2-Aminopropyl)-5-methyl-imidazol (1), die Bestimmung der absoluten Konfiguration sowie die histaminartige Wirksamkeit der Enantiomere am Ileum (H1) und Atrium (H2) des Meerschweinchens beschrieben. Structure-Activity Relationships of Histamine Analogues, XXIV: Absolute Configuration and Histamine-Type Activity of the Enantiomers of 4-(2-Aminopropyl)-5-methylimidazole The resolution of 4-(2-aminopropyl)-5-methylimidazole (1), the determination of the absolute configuration and the histamine-type activity of the enantiomers on the guinea pig ileum (H1) and atrium (H2) are reported.

ChemistryStereochemistryDrug DiscoveryAbsolute configurationPharmaceutical ScienceEnantiomerGuinea pig ileumMolecular conformationArchiv der Pharmazie
researchProduct

Rearrangement of 4,5-epoxy-9-trimethylsilyldecalines. Application to the synthesis of the natural eremophilane (-)-aristolochene.

2006

Several 4,5-epoxy-9-trimethylsilyl-eudesmanes and 15-nor-eudesmanes, having different relative stereochemistry and substitution at the oxirane ring, have been prepared starting from (-)-carvone and subjected to acid-promoted rearrangement. The presence of the silicon at C9 favors two different main reaction pathways involving C14-methyl or C1-methylene migration through the stabilization of a C10 carbocation intermediate. Selective 1,2-migration of the bridgehead methyl group takes place with trisubstituted beta-epoxide and tetrasubstituted alpha-epoxide, yielding 4-hydroxy-eremophilane and 15-nor-eremophilane compounds, while the trisubstituted alpha-epoxide suffers successive rearrangemen…

ChemistryStereochemistryMonoterpeneOrganic ChemistryMolecular ConformationEpoxideStereoisomerismCarbocationNaphthalenesRing (chemistry)SesquiterpeneChemical synthesischemistry.chemical_compoundOrganic chemistrySelectivityAristolocheneSesquiterpenesThe Journal of organic chemistry
researchProduct

New Strategy for the Stereoselective Synthesis of Fluorinated β-Amino Acids

2002

Racemic and chiral nonracemic alpha-substituted and alpha-unsubstituted beta-fluoroalkyl beta-amino acid derivatives 6 and 9 have been synthesized in two steps starting from fluorinated imidoyl chlorides 1 and ester enolates. This approach is based on the chemical reduction of previously obtained gamma-fluorinated beta-enamino esters 4 by using ZnI(2)/NaBH(4) in a nonchelated aprotic medium (dry CH(2)Cl(2)) as the reducing agent. A metal-chelated six-membered model has been suggested to explain the stereochemical outcome of the reduction reaction. The process takes place with high yields and with moderate to good diastereoselectivity. The best results related to diastereoselective reduction…

Chiral auxiliaryHydrocarbons FluorinatedMolecular StructureReducing agentOrganic ChemistryMolecular ConformationStereoisomerismTautomerChemical synthesisEnaminechemistry.chemical_compoundchemistryDrug DesignCombinatorial Chemistry TechniquesOrganic chemistryStereoselectivityAmino AcidsChemoselectivityImideNuclear Magnetic Resonance BiomolecularThe Journal of Organic Chemistry
researchProduct

The negatively charged amino acids in the lumenal loop influence the pigment binding and conformation of the major light-harvesting chlorophyll a/b c…

2008

AbstractThe major chlorophyll (Chl) a/b complexes of photosystem II (LHCIIb), in addition to their primary light-harvesting function, play key roles in the organization of the granal ultrastructure of the thylakoid membranes and in various regulatory processes. These functions depend on the structural stability and flexibility of the complexes. The lumenal side of LHCIIb is exposed to broadly variable pH environments, due to the build-up and decay of the pH gradient during photosynthesis. Therefore, the negatively charged amino acids in the lumenal loop might be of paramount importance for adjusting the structure and functions of LHCIIb. In order to clarify the structural roles of these res…

ChlorophyllCircular dichroismPhotosystem IIPigment bindingMolecular ConformationBiophysicsPhotosynthesisBiochemistryMajor light-harvesting a/b complex of photosystem IILow pHAmino AcidsSpectroscopyPhotosystemchemistry.chemical_classificationChemistryCircular DichroismPhotosystem II Protein ComplexPigments BiologicalCell BiologyHydrogen-Ion ConcentrationAmino acidCrystallographyB vitaminsMutagenesisThylakoidBiophysicsElectrophoresis Polyacrylamide GelProtein BindingBiochimica et Biophysica Acta (BBA) - Bioenergetics
researchProduct

Hierarchical Self-Organization of Perylene Bisimide–Melamine Assemblies to Fluorescent Mesoscopic Superstructures

2000

A series of three perylene tetracarboxylic acid bisimide dyes 3a-c bearing phenoxy substituents at the four bay positions of the perylene core were synthesized and their complexation behavior to complementary ditopic dialkyl melamines 8a-c was investigated. Binding constants and Gibbs binding energies for the hydrogen bonds between the imide and the complementary melamine moiety have been determined in several solvents by NMR and UV/Vis titration experiments with monotopic model compounds 5 and 9. The effects of the solvent polarity and specific solvent-solute interactions on the degree of polymerization of (3 x 8)n are discussed, and a general formula to estimate the chain length of [AA-BB…

ChlorophyllMagnetic Resonance SpectroscopyLightPolymersMolecular ConformationSupramolecular chemistryDegree of polymerizationImidesPhotochemistryFluorescenceCatalysischemistry.chemical_compoundNon-covalent interactionsPerylenechemistry.chemical_classificationMicroscopy ConfocalTriazinesHydrogen bondOrganic ChemistryOptical polarizationPolymerGeneral ChemistrySolutionsSupramolecular polymersMicroscopy ElectronchemistrySpectrophotometry UltravioletPeryleneChemistry – A European Journal
researchProduct

Quantum chemical simulation of excited states of chlorophylls, bacteriochlorophylls and their complexes

2006

The present review describes the use of quantum chemical methods in estimation of structures and electronic transition energies of photosynthetic pigments in vacuum, in solution and imbedded in proteins. Monomeric Mg-porphyrins, chlorophylls and bacteriochlorophylls and their solvent 1:1 and 1:2 complexes were studied. Calculations were performed for Mg-porphyrin, Mg-chlorin, Mg-bacteriochlorin, mesochlorophyll a, chlorophylls a, b, c(1), c(2), c(3), d and bacteriochlorophylls a, b, c, d, e, f, g, h, plus several homologues. Geometries were optimised with PM3, PM3/CISD, PM5, ab initio HF (6-31G*/6-311G**) and density functional B3LYP (6-31G*/6-311G**) methods. Spectroscopic transition energ…

ChlorophyllModels MolecularMolecular ConformationAb initioGeneral Physics and AstronomyElectronic structureCrystallography X-RayMolecular electronic transitionLight-harvesting complexchemistry.chemical_compoundAb initio quantum chemistry methodsComputational chemistryComputer SimulationZINDOPhysical and Theoretical ChemistryBacteriochlorophyllsbiologyChemistryChloroflexus aurantiacusProteinsbiology.organism_classificationEnergy TransferModels ChemicalQuantum TheoryPhysical chemistryBacteriochlorophyllPhys. Chem. Chem. Phys.
researchProduct

Strong circularly polarized luminescence of an octahedral chromium(iii) complex

2019

The chiral spin-flip luminophore [Cr(ddpd)2]3+ can be resolved into enantiopure material by chiral HPLC. The corresponding enantiomers show very high luminescence dissymmetry factors of up to ∣glum ∣≈ 0.093 in circularly polarized luminescence (CPL) measurements for the "ruby-like" phosphorescence transition 2E/2T1 → 4A2 in the near-IR region around λ ≈ 775 nm.

ChromiumLuminescenceMaterials scienceLuminescent MeasurementsMolecular Conformationchemistry.chemical_element010402 general chemistry01 natural sciencesCatalysischemistry.chemical_compoundChromiumCoordination ComplexesMaterials ChemistryDensity Functional Theory010405 organic chemistryMetals and AlloysGeneral Chemistry0104 chemical sciencesSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsChiral column chromatographyCrystallographyEnantiopure drugchemistryLuminescent MeasurementsCeramics and CompositesLuminophoreEnantiomerLuminescencePhosphorescenceChemical Communications
researchProduct