Search results for "molecule"

showing 10 items of 5162 documents

How to untie G-quadruplex knots and why?

2021

International audience; For over two decades, the prime objective of the chemical biology community studying G-quadruplexes (G4s) has been to use chemicals to interact with and stabilize G4s in cells to obtain mechanistic interpretations. This strategy has been undoubtedly successful, as demonstrated by recent advances. However, these insights have also led to a fundamental rethinking of G4-targeting strategies: due to the prevalence of G4s in the human genome, transcriptome, and ncRNAome (collectively referred to as the G4ome), and their involvement in human diseases, should we continue developing G4-stabilizing ligands or should we invest in designing molecular tools to unfold G4s? Here, …

Clinical BiochemistryChemical biologyComputational biology[CHIM.THER]Chemical Sciences/Medicinal ChemistryBiology010402 general chemistryG-quadruplex01 natural sciencesBiochemistry03 medical and health sciencesgenetic diseasesDrug DiscoveryHumansMolecular Biologyunfolding030304 developmental biologyPharmacology0303 health sciencesG-quadruplex[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry Molecular Biology/Structural Biology [q-bio.BM]Genome Humanhelicasesgenetic instability0104 chemical sciencesG-Quadruplexessmall moleculesMolecular Medicine
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Identification and isolation of the primary aggregation factor from the cell membrane of the sponge Geodia cydonium

1985

The primary aggregation factor (pAF) of sponge cells is a glycoprotein that is firmly associated with the cell membrane. Polyspecific antibodies (anti-GM) prepared from sera raised against membranes of cells from the siliceous sponge Geodia cydonium were found to inhibit initial aggregation of homologous cells. The inhibition of aggregation, caused by anti-GM was neutralized by pAF. The pAF had been successfully solubilized and enriched by affinity chromatography, gel filtration and density gradient centrifugation, if checked by polyacrylamide gel electrophoresis in the presence of urea. The Mr of the native pAF was approximately 40 000 as estimated by gel filtration; under denaturing condi…

Clinical BiochemistrySize-exclusion chromatographyBiologyCell membraneSpecies SpecificityAffinity chromatographymedicineAnimalsGeodiaMolecular BiologyPolyacrylamide gel electrophoresisCell AggregationGlycoproteinschemistry.chemical_classificationDifferential centrifugationCell MembraneMembrane ProteinsLectinCell BiologyGeneral Medicinebiology.organism_classificationMolecular biologyPoriferamedicine.anatomical_structurechemistryBiochemistrybiology.proteinlipids (amino acids peptides and proteins)GlycoproteinCell Adhesion MoleculesMolecular and Cellular Biochemistry
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Natural Products Derived from Traditional Chinese Medicine as Novel Inhibitors of the Epidermal Growth Factor Receptor

2010

The epidermal growth factor receptor (EGFR) has become an important molecular target in cancer therapy. Various small molecules and therapeutic antibodies targeting EGFR family members have been developed during recent years and are established in clinical oncology. However, increasing clinical application of EGFR tyrosine kinase inhibitors has resulted in the development of resistance to EGFR-targeting drugs due to the selection of EGFR-mutated variants. This phenomenon forced the search for novel EGFR inhibitors with activity towards EGFR-mutant tumors. This review describes recent achievements in natural products derived from medicinal plants as novel EGFR inhibitors.

Clinical OncologyPlants MedicinalbiologyOrganic ChemistryCancer therapyGeneral MedicineTraditional Chinese medicinePharmacologyAntineoplastic Agents PhytogenicSmall moleculeComputer Science ApplicationsErbB ReceptorsNeoplasmsDrug DiscoveryMolecular targetsbiology.proteinAnimalsHumansEpidermal growth factor receptorMedicine Chinese TraditionalEGFR FamilyDrugs Chinese HerbalEGFR inhibitorsCombinatorial Chemistry & High Throughput Screening
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Old Weapons for New Wars: Bioactive Molecules From Cnidarian Internal Defense Systems

2016

The renewed interest in the study of genes of immunity in Cnidaria has led to additional information to the scenario of the first stages of immunity evolution revealing the cellular processes involved in symbiosis, in the regulation of homeostasis and in the fight against infections. The recent study with new molecular and functional approach on these organisms have therefore contributed with unexpected information on the knowledge of the stages of capturing activities and defense mechanisms strongly associated with toxin production. Cnidarians are diblastic aquatic animals with radial symmetry; they represent the ancestral state of Metazoa, they are the simplest multicellular organisms tha…

CnidariaImmune defenseMicrobial toxinsbiologyPhylumEcologyGeneral NeuroscienceBioactive moleculesNeurotoxinsDefence mechanismsbiology.organism_classificationCnidariaMulticellular organismCnidarian VenomsNeuropsychology and Physiological PsychologyAnti-Infective AgentsAntimicrobial peptide Cnidaria Cytolysins Immune defense Neurotoxin ToxinsImmunityEvolutionary biologyAnimalsHumansMolecular MedicinePeptidesSodium Channel Blockers
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Inflammatory reaction and isolation of multifunctional bioactive molecules in cnidarians: from Immunobiology to Blue Biotechnology

2015

The phylum of Cnidaria is one of the first branches in the tree of animal life to provide crucial insights on the evolution of immunity. Cnidarians are diblastic aquatic animals with radial symmetry and they are the simplest multicellular organisms that have reached the level of tissue organization. The renewed interest in the study of immunity in Cnidaria has led to additional information to the scenario of the first stages of immunity evolution revealing the cellular processes involved in symbiosis, in the regulation of homeostasis and in the fight against infections. We investigated the inflammatory response in Cnidarian following injection of various substances different in type and dim…

Cnidariabioactive moleculesCnidaria; bioactive molecules
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Microwave–Materials Interactions and Dielectric Properties: From Molecules and Macromolecules to Solids and Colloidal Suspensions

2012

ColloidMaterials scienceChemical engineeringChemical physicsDielectric permittivityMoleculeDielectricMicrowaveMacromoleculeMicrowaves in Organic Synthesis
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Overview of the Evolution of Silica-Based Chromo-Fluorogenic Nanosensors

2019

[EN] This review includes examples of silica-based, chromo-fluorogenic nanosensors with the aim of illustrating the evolution of the discipline in recent decades through relevant research developed in our group. Examples have been grouped according to the sensing strategies. A clear evolution from simply functionalized materials to new protocols involving molecular gates and the use of highly selective biomolecules such as antibodies and oligonucleotides is reported. Some final examples related to the evolution of chromogenic arrays and the possible use of nanoparticles to communicate with other nanoparticles or cells are also included. A total of 64 articles have been summarized, highlight…

ColorNanoparticleNanotechnologyReviewMesoporous010402 general chemistry01 natural sciencesBiochemistryFluorescencegated materialsAnalytical ChemistryQUIMICA ORGANICAMolecular recognitionsensorNanosensorarraysGated materialsElectrical and Electronic EngineeringArraysInstrumentationSensorchemistry.chemical_classification010405 organic chemistryChemistryChromogenicOligonucleotideBiomoleculeQUIMICA INORGANICASilicaHighly selectiveAtomic and Molecular Physics and Opticscolor0104 chemical sciencessilicaNanoparticlesnanoparticlesfluorescencemolecular recognitionMolecular recognitionmesoporousMesoporous materialSensors
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Comparison of electron density properties in frozen and relaxed electronic distributions.

2003

Two kinds of electron densities for several small molecules (H(2), FH, CH(3)CH(3), CH(3)NH(2), CH(3)OH, and CH(3)F) have been generated for a wide range of bond distances. The first one, as the sum of the electron density of the isolated fragments, and the second one by optimizing the electron density at each given geometrical disposition. A number of properties of this two electronic distributions have been compared (position of the bond critical points, electron density, Laplacian, curvatures, and local energies). The differences, associated to the bond formation, are found to be very important for most of the cases.

Computational MathematicsRange (particle radiation)Electron densityChemistryPosition (vector)Atoms in moleculesGeneral ChemistryElectronBond formationAtomic physicsLaplace operatorElectron localization functionJournal of computational chemistry
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Inherently Chiral Calixarenes

1994

Due to the nonplanarity of the basic 1 n -metacyclophane system, calixarenes and resorcarenes can be transformed into molecules with inherent chirality. Various attempts to achieve this goal are reviewed. Special emphasis is given to derivatives with C n -symmetry, including derivatives of spherand calixarenes and other calixarene-like macrocycles.

Computational chemistryChemistryCalixareneOrganic chemistryMoleculeInherent chiralitySymmetry (physics)
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The molecular structure of N-hydroxyurea

1996

Ab initio calculations were performed on the tautomers and conformers of N-hydroxyurea using a 6-31G** basis set. The minimum-energy structures have been found and the importance of the intramolecular hydrogen bond as the stabilizing factor was pointed out. © 1996 John Wiley & Sons, Inc.

Computational chemistryChemistryHydrogen bondAb initio quantum chemistry methodsIntramolecular forceMoleculeN-HydroxyureaPhysical and Theoretical ChemistryCondensed Matter PhysicsConformational isomerismTautomerAtomic and Molecular Physics and OpticsBasis set
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