Search results for "molecule"

showing 10 items of 5162 documents

Theoretical studies of isomers of C 3 H 2 using a multiconfigurational approach

2000

The C3H2 isomers are important molecules in interstellar space. An understanding of their electronic structure can contribute significantly to the interpretation of interstellar spectra. In a theoretical study of the C3H2 isomers a multiconfigurational treatment is of interest because many of the isomers are carbenes or diradicals. We present such an investigation of all possible C3H2 isomers. The most important features of their electronic and vibrational spectra are calculated. Earlier theoretical studies are reviewed and it is shown that the present study yields the same order of stability for the singlet and triplet states as most previous studies.

Computational chemistryChemistryPhysics::Atomic and Molecular ClustersMoleculeElectronic structureSinglet statePhysics::Chemical PhysicsPhysical and Theoretical ChemistryAstrophysics::Galaxy AstrophysicsSpectral lineVibrational spectraTheoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta)
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From magnetic to nonlinear optical switches in spin-crossover complexes

2013

ISI Document Delivery No.: 109TF Times Cited: 0 Cited Reference Count: 173 Lacroix, Pascal G. Malfant, Isabelle Real, Jose-Antonio Rodriguez, Vincent Wiley-v c h verlag gmbh Weinheim Si; Various attempts to combine magnetic and nonlinear optical (NLO) properties in a molecule are reviewed, with a special focus on the possibility of interplay between the magnetic component and the quadratic (proportional to E-2) NLO response. This multidisciplinary research leads to the idea of spin-crossover-induced (SCO-induced) NLO switching and is evaluated at the synthetic level, with insights provided by computational chemistry. The need for nontraditional experimental setups to record NLO properties i…

Computational chemistryNonlinear opticsroom-temperaturetransition-metal-complexesSolid-stateNanotechnology02 engineering and technology010402 general chemistry01 natural scienceselectrical-conductivityInorganic ChemistryNonlinear opticalQuadratic equationSpin crossoverbinuclear iron(iii) complexesMagnetic componentsMoleculenlo propertiesNuclear Experimentliquid-crystalCondensed matter physicsChemistryNonlinear optics021001 nanoscience & nanotechnologySpin crossoverMaterials science0104 chemical sciences2nd-harmonic generationHigh Energy Physics::Experimentschiff-base ligandsray crystal-structure0210 nano-technologyFocus (optics)hyper-rayleigh scatteringMolecular devices
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Invariance of electrophilicity of independent fragments. Application to intramolecular diels-alder reactions

2010

Abstract We herein demonstrate that the global electrophilicity may be distributed into fragments within a single molecule by using an empirical partitioning scheme of the electronic chemical potential framed on the chemical potential inequality principle. Group electrophilicity for several fragments may thereby be defined. Their values show a remarkable stability, independent of the chemical environment they are attached to. The model is applied to asses the chemical reactivity of a series of fragments involved in intramolecular Diels–Alder reactions.

Computational chemistryStereochemistryChemistryGroup (periodic table)Intramolecular forceElectrophileDiels alderGeneral Physics and AstronomyMoleculePhysical and Theoretical Chemistry
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Non-equilibrium Markov state modeling of periodically driven biomolecules

2019

Molecular dynamics simulations allow to study the structure and dynamics of single biomolecules in microscopic detail. However, many processes occur on time scales beyond the reach of fully atomistic simulations and require coarse-grained multiscale models. While systematic approaches to construct such models have become available, these typically rely on microscopic dynamics that obey detailed balance. In vivo, however, biomolecules are constantly driven away from equilibrium in order to perform specific functions and thus break detailed balance. Here we introduce a method to construct Markov state models for systems that are driven through periodically changing one (or several) external p…

Computer scienceFOS: Physical sciencesGeneral Physics and AstronomyMarkov processMolecular Dynamics Simulation010402 general chemistry01 natural sciencesMolecular dynamicssymbols.namesake0103 physical sciencesPhysics - Biological PhysicsStatistical physicsPhysical and Theoretical ChemistryCondensed Matter - Statistical Mechanicschemistry.chemical_classificationQuantitative Biology::BiomoleculesStatistical Mechanics (cond-mat.stat-mech)010304 chemical physicsMarkov chainBiomoleculeMolecular biophysicsDetailed balanceDipeptidesComputational Physics (physics.comp-ph)Markov Chains0104 chemical sciencesModels ChemicalchemistryBiological Physics (physics.bio-ph)Benchmark (computing)symbolsState (computer science)Physics - Computational PhysicsThe Journal of Chemical Physics
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Xylochemicals and where to find them

2021

This article surveys a range of important platform and high value chemicals that may be considered primary and secondary 'xylochemicals'. A summary of identified xylochemical substances and their natural sources is provided in tabular form. In detail, this review is meant to provide useful assistance for the consideration of potential synthetic strategies using xylochemicals, new methodologies and the development of potentially sustainable, xylochemistry-based processes. It should support the transition from petroleum-based approaches and help to move towards more sustainability within the synthetic community. This feasible paradigm shift is demonstrated with the total synthesis of natural …

Computer scienceParadigm shiftSustainabilityMaterials ChemistryMetals and AlloysCeramics and CompositesGeneral ChemistryBiochemical engineeringCatalysisNatural (archaeology)Surfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsOrganic moleculesChemical Communications
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A PH-functionalized polyphosphazene: a macromolecule with a highly flexible backbone.

2006

Condensation polymerPolymerizationChemistryAb initio quantum chemistry methodsPolymer chemistryPolyphosphazeneGeneral ChemistryCatalysisMacromoleculeAngewandte Chemie (International ed. in English)
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Hyperbranched Polylactide Copolymers

2006

A series of hyperbranched poly(l-lactide) (PLLA) copolymers were prepared by copolymerization of dilactide with 2,2-bis(hydroxymethyl)butyric acid (BHB) as an AB2 comonomer via a combined ring-open...

Condensation polymerPolymers and PlasticsComonomerOrganic ChemistryRing-opening polymerizationInorganic ChemistryButyric acidchemistry.chemical_compoundchemistryPolymer chemistryMaterials ChemistryMelting pointCopolymerMoleculeOrganic chemistryHydroxymethylMacromolecules
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Ab initio modelling of UN grain boundary interfaces

2012

The uranium mononitride (UN) is a material considered as a promising candidate for Generation-IV nuclear reactor fuels. Unfortunately, oxygen in air affects UN fuel performance and stability. Therefore, it is necessary to understand the mechanism of oxygen adsorption and further UN oxidation in the bulk and at surface. Recently, we performed a detailed study on oxygen interaction with UN surface using density functional theory (DFT) calculations. We were able to identify an atomistic mechanism of UN surface oxidation consisting of several important steps, starting with the oxygen molecule dissociation and finishing with oxygen atom incorporation into vacancies on the surface. However, in re…

Condensed Matter - Materials ScienceMaterials scienceAb initioMaterials Science (cond-mat.mtrl-sci)FOS: Physical scienceschemistry.chemical_elementThermodynamicsUraniumOxygenDissociation (chemistry)chemistryVacancy defectMoleculeDensity functional theoryGrain boundary
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Chemisorption of a molecular oxygen on the UN(001) surface: Ab initio calculations

2010

The results of DFT GGA calculations on oxygen molecules adsorbed upon the (0 0 1) surface of uranium mononitride (UN) are presented and discussed. We demonstrate that O2 molecules oriented parallel to the substrate can dissociate either (i) spontaneously when the molecular center lies above the surface hollow site or atop N ion, (ii) with the activation barrier when a molecule sits atop the surface U ion. This explains fast UN oxidation in air.

Condensed Matter - Materials ScienceNuclear and High Energy PhysicsMaterials Science (cond-mat.mtrl-sci)FOS: Physical scienceschemistry.chemical_elementSubstrate (electronics)Computational Physics (physics.comp-ph)UraniumOxygenIonbody regionsAdsorptionNuclear Energy and EngineeringchemistryChemisorptionAb initio quantum chemistry methodsComputational chemistryMoleculePhysical chemistryGeneral Materials SciencePhysics - Computational PhysicsJournal of Nuclear Materials
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Infrared nanospectroscopic mapping of DNA molecules on mica surface

2022

Significant efforts have been done in last two decades to develop nanoscale spectroscopy techniques owning to their great potential for single-molecule structural detection and in addition, to resolve open questions in heterogeneous biological systems, such as protein-DNA complexes. Applying AFM-IR technique has become a powerful leverage for obtaining simultaneous absorption spectra with a nanoscale spatial resolution for studied proteins, however the IR-AFM investigation of DNA molecules on surface, as a benchmark for a nucleoprotein complexes nanocharacterization, has remained elusive. Herein, we demonstrate methodological approach for acquisition of IR-AFM mapping modalities with corres…

Condensed Matter - Mesoscale and Nanoscale PhysicsQuantitative Biology - BiomoleculesBiological Physics (physics.bio-ph)FOS: Biological sciencesMesoscale and Nanoscale Physics (cond-mat.mes-hall)FOS: Physical sciences[SDV.BBM.BP] Life Sciences [q-bio]/Biochemistry Molecular Biology/BiophysicsBiomolecules (q-bio.BM)Physics - Biological Physics
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