Search results for "molecule"

showing 10 items of 5162 documents

Cloning and expression of new receptors belonging to the immunoglobulin superfamily from the marine sponge Geodia cydonium

1999

A cDNA encoding a receptor tyrosine kinase (RTK) was previously cloned and expressed from the marine sponge (Porifera) Geodia cydonium. In addition to the two intracellular regions characteristic for RTKs, two immunoglobulin (Ig)-like domains are found in the extracellular part of the sponge RTK. In the present study it is shown that no further Ig-like domain is present in the upstream region of the cDNA as well as of the gene hitherto known from the sponge RTK. Two different full-length cDNAs have been isolated and characterized in the present study, which possess two Ig-like domains, one transmembrane segment, and only a short intracellular part, without a TK domain. The two deduced polyp…

DNA ComplementaryTranscription GeneticMolecular Sequence DataImmunologyImmunoglobulinsBiologyReceptor tyrosine kinaseComplementary DNAGeneticsAnimalsHumansAmino Acid SequenceNorthern blotReceptors ImmunologicPeptide Chain Initiation TranslationalIntracellular partPolymorphism GeneticBase SequenceReceptor Protein-Tyrosine KinasesBlotting NorthernImmunohistochemistryMolecular biologyPoriferaProtein Structure TertiaryTransplantationOpen reading frameTransmembrane domainbiology.proteinImmunoglobulin superfamilyCell Adhesion MoleculesImmunogenetics
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Analysis of Infrared and Raman-Spectra of 116SnH4 in the 1900 cm-1 Region - Study of the 1000, 0010 Interacting States

1991

0022-2852

DOUBLE-RESONANCEFOURIER-TRANSFORM SPECTROSCOPYMETHANENU4 BANDSTETRAHEDRAL XY4 MOLECULESMICROWAVE DOUBLE-RESONANCESNH4DIODE-LASER SPECTROSCOPYRADIOFREQUENCY DOUBLE-RESONANCEFREQUENCYNU-4 BANDS
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Collisional Broadening, Line Shifting, and Line Mixing in the Stimulated Raman 2-v2 Q-Branch of CH4

1991

0021-9606; Self-, argon-, and helium-broadening coefficients have been measured for 13 lines in the 2v2 Raman Q branch of CH4 using stimulated inverse Raman spectroscopy. The linewidths clearly show the symmetry-state dependence characteristic of pressure broadening, and inelastic processes in general, involving spherical-top molecules. Pressure-induced line shifts have also been measured for these features in pure methane. The pressure-shift coefficients do not display the symmetry-state dependence found for the linewidths. By applying the Rosenkranz perturbation treatment to a pair of collisionally mixed lines, we have been able to obtain an estimate of individual state-to-state contribut…

DOUBLE-RESONANCETUNABLE DIODE-LASERVIBRATIONAL POLYADSSPECTROSCOPYMETHANE LINESTHEORETICAL-ANALYSISINFRAREDROTATIONAL ENERGY-TRANSFERTETRAHEDRAL MOLECULESPhysics::Atomic PhysicsRATESINELASTICLOW-TEMPERATURES
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Structural investigation of the confinement of finite amounts of trehalose in water-containing sodium bis(2-ethylhexyl)sulfosuccinate reversed micell…

2006

The structural effect of trehalose confined in water-containing sodium bis(2-ethylhexyl)sulfosuccinate (AOT) reversed micelles at water to AOT molar ratio W = 5 and 10 as a function of the trehalose to AOT molar ratio T (0 < T < 0.1) has been investigated by small-angle neutron scattering (SANS). SANS data analysis is consistent with the hypothesis that trehalose is encapsulated within the quite spherical hydrophilic micellar cores of water-containing reversed micelles, causing an increase of the aggregate size and a decrease of the polydispersion. Moreover, SANS results suggest that the trehalose confinement in water-containing reversed micelles involves marked changes on the molecular pac…

DYNAMICSBILAYERSPROTEINSSodiumIntercalation (chemistry)chemistry.chemical_elementVITRIFICATIONMicelleANGLE NEUTRON-SCATTERINGchemistry.chemical_compoundPulmonary surfactantMICROEMULSIONSPhase (matter)Materials ChemistrymedicineMoleculeOrganic chemistryDehydrationPhysical and Theoretical ChemistrySUCROSEChemistryHYDRATIONmedicine.diseaseTrehaloseSurfaces Coatings and FilmsChemical engineering
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Inverse Conformational Selection in Lipid–Protein Binding

2021

International audience; Interest in lipid interactions with proteins and other biomolecules is emerging not only in fundamental biochemistry but also in the field of nanobiotechnology where lipids are commonly used, for example, in carriers of mRNA vaccines. The outward-facing components of cellular membranes and lipid nanoparticles, the lipid headgroups, regulate membrane interactions with approaching substances, such as proteins, drugs, RNA, or viruses. Because lipid headgroup conformational ensembles have not been experimentally determined in physiologically relevant conditions, an essential question about their interactions with other biomolecules remains unanswered: Do headgroups excha…

DYNAMICSELECTRIC CHARGEBILAYERSPHOSPHATIDYLCHOLINE HEADGROUPMembrane lipidsDEUTERIUMPlasma protein bindingMolecular Dynamics Simulationlipidit010402 general chemistry01 natural sciencesBiochemistrybiomolekyylitCatalysis03 medical and health sciencesMolecular dynamicskemialliset sidoksetColloid and Surface ChemistryProtein structurePHOSPHOLIPID-BINDINGMAGNETIC-RESONANCE[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologySEGMENTAL ORDER[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyConformational ensemblesNuclear Magnetic Resonance Biomolecular030304 developmental biologychemistry.chemical_classification0303 health sciencesChemistryBiomoleculeMEMBRANE-LIPIDSProteinsPhosphatidylglycerolsGeneral Chemistrycomputer.file_formatProtein Data BankLipids0104 chemical sciencesBiophysicsPhospholipid BindingPhosphatidylcholinesMAS NMR1182 Biochemistry cell and molecular biologylipids (amino acids peptides and proteins)proteiinitcomputerProtein Binding
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Time propagation of the Kadanoff–Baym equations for inhomogeneous systems

2009

We have developed a time propagation scheme for the Kadanoff-Baym equations for general inhomogeneous systems. These equations describe the time evolution of the nonequilibrium Green function for interacting many-body systems in the presence of time-dependent external fields. The external fields are treated nonperturbatively whereas the many-body interactions are incorporated perturbatively using Phi-derivable self-energy approximations that guarantee the satisfaction of the macroscopic conservation laws of the system. These approximations are discussed in detail for the time-dependent Hartree-Fock, the second Born and the GW approximation.

DYNAMICSGW approximationPhysicsConservation lawNONEQUILIBRIUM PROCESSESCondensed Matter - Mesoscale and Nanoscale PhysicsStrongly Correlated Electrons (cond-mat.str-el)Time evolutionFOS: Physical sciencesGeneral Physics and AstronomyNon-equilibrium thermodynamicsELECTRON-GASSEMICONDUCTORSGREENS-FUNCTIONTRANSPORTATOMSCondensed Matter - Other Condensed MatterMOLECULESCondensed Matter - Strongly Correlated ElectronsClassical mechanicsMesoscale and Nanoscale Physics (cond-mat.mes-hall)SCATTERINGPhysical and Theoretical ChemistryOther Condensed Matter (cond-mat.other)The Journal of Chemical Physics
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Rotational Raman spectroscopy of ethylene using a femtosecond time-resolved pump-probe technique.

2005

154309; Femtosecond Raman-induced polarization spectroscopy (RIPS) was conducted at low pressure (250 mb at 295 K and 400 mb at 373 K) in ethylene. The temporal signal, resulting from the beating between pure rotational coherences, was measured with a heterodyne detection. The temporal traces were converted to the frequency domain using a Fourier transformation and then analyzed thanks to the D2hTDS software (http://www.u-bourgogne.fr/LPUB/shTDS.html) dedicated to X2Y4 molecules with D2h symmetry. The effective Hamiltonian was expanded up to order 2, allowing the determination of five parameters with an rms of 0.017 cm(-1). Special care was taken in the precise modeling of intensities, taki…

DYNAMICSLIQUID WATERTENSORIAL FORMALISMGeneral Physics and Astronomy02 engineering and technology01 natural sciencessymbols.namesakeMOLECULESOpticsINDUCED POLARIZATION SPECTROSCOPYPolarizability0103 physical sciencesCOHERENCEHeterodyne detectionPhysical and Theoretical ChemistrySpectroscopySPECTRUM010304 chemical physicsChemistrybusiness.industry021001 nanoscience & nanotechnologyPolarization (waves)Fourier transformFrequency domainFemtosecondsymbolsZEOLITEMODESCO2Atomic physics0210 nano-technologyRaman spectroscopybusinessThe Journal of chemical physics
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Three-dimensional solvation structure of ethanol on carbonate minerals

2020

Calcite and magnesite are important mineral constituents of the earth’s crust. In aqueous environments, these carbonates typically expose their most stable cleavage plane, the (10.4) surface. It is known that these surfaces interact with a large variety of organic molecules, which can result in surface restructuring. This process is decisive for the formation of biominerals. With the development of 3D atomic force microscopy (AFM) it is now possible to image solid–liquid interfaces with unprecedented molecular resolution. However, the majority of 3D AFM studies have been focused on the arrangement of water at carbonate surfaces. Here, we present an analysis of the assembly of ethanol – an o…

DYNAMICSMaterials scienceADSORPTIONSURFACECarbonate mineralsIonic bondingGeneral Physics and Astronomy02 engineering and technologylcsh:Chemical technology010402 general chemistrylcsh:Technology01 natural sciencesFull Research Paper3D AFMGENERAL FORCE-FIELDMolecular dynamicschemistry.chemical_compoundCALCITEMoleculeNanotechnologyWATERlcsh:TP1-1185General Materials ScienceElectrical and Electronic Engineeringlcsh:ScienceCalcitelcsh:THYDRATIONSolvationMD simulation021001 nanoscience & nanotechnologymagnesite540lcsh:QC1-9990104 chemical sciencesNanosciencechemistryChemical physicsCONJUGATE GRADIENTSCarbonatelcsh:Qethanol0210 nano-technologycalcitelcsh:Physicssolvation structureMagnesite
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Slow Magnetic Relaxation in a Co (II)–Y (III) Single‐Ion Magnet with Positive Axial Zero‐Field Splitting

2013

This work was supported by the MINECO (Spain) (Project CTQ2011-24478), the Junta de Andalucía (FQM-195 and Project of excellence P08-FQM-03705), and the University of Granada. E.R. and E.Cr. thank MINECO grant No. CTQ2011-23862-C02-01 and Generalitat de Catalunya grant No. 2009SGR-1459, for financial support. We would like to thank Prof. Liviu Chibotaru for providing us the SINGLE_ANISO program and Dr. Andrew Ozarowski for the EPR simulation software. E.K.B. thanks the EPSRC and Leverhulme Trust for financial support. The NHMFL is funded by the NSF, DoE, and the state of Florida. J.C. acknowledges financial support by the Spanish Ministerio de Ciencia e Innovación through projects CTQ2010-1…

DYNAMICSModels Molecularpositive zero-field splittingINSchemistry.chemical_elementZero field splitting010402 general chemistry01 natural sciences7. Clean energyCatalysisO ligandsMOLECULE MAGNETNuclear magnetic resonancesingle ion magnetsYttriumMagnetic relaxationCompartmental ligandAnisotropyHYSTERESISComputingMilieux_MISCELLANEOUSANISOTROPY[PHYS]Physics [physics]IonsMolecular StructureCondensed matter physicsSingle ion010405 organic chemistryChemistryCobaltGeneral ChemistryYttriumNBARRIERcobaltCo(II)FAMILY0104 chemical sciencesyttriumHysteresisPositive axial ZFSDYSPROSIUM(III)TBMagnetic FieldsMagnetMagnetsSingle ion magnetCOMPLEXESCobaltBEHAVIOR
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Nonintrusive monitoring and quantitative analysis of strong laser-field-induced impulsive alignment

2004

We report the observation of impulsive alignment of $\mathrm{C}{\mathrm{O}}_{2}$ molecules produced through their interaction with a nonresonant, strong laser pulse. The periodic alignment is monitored using a polarization technique generally employed in optical Kerr effect experiments; the birefringence produced by alignment of the molecular sample is measured with a weak pulse, time-delayed with respect to the alignment pulse. The technique provides a signal proportional to $⟨{\mathrm{cos}}^{2}\phantom{\rule{0.2em}{0ex}}\ensuremath{\theta}⟩\ensuremath{-}\frac{1}{3}$, where $\ensuremath{\theta}$ is the polar angle between the molecular axis and the strong-field polarization axis. Experimen…

DYNAMICSPhysicsI-2BirefringenceKerr effectWave packetWAVE-PACKETSALIGNING MOLECULESPOLARIZABILITYPolarization (waves)Electromagnetic radiationAtomic and Molecular Physics and OpticsPULSESSchrödinger equationMOLECULAR ALIGNMENTMOLECULESsymbols.namesakeREVIVAL STRUCTURESPolarizabilityIonizationQuantum mechanicssymbolsAtomic physicsPhysical Review A
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