Search results for "network"

showing 10 items of 7718 documents

Condition-dependent skipped spawning in anadromous brown trout (Salmo trutta)

2018

Repeat spawners of anadromous salmonids may contribute significantly to population resilience by providing multiple cohorts to both seawater and freshwater life stages. In this study, winter survival of sea trout (Salmo trutta Linnaeus, 1758) post spawners (kelts) was 89%. Sea survival increased linearly with female length with a return probability between 30% and 50%, whereas males attained a maximum return probability of 60% at 520 mm. Of the returning sea trout, 40% skipped spawning and they had significantly lower condition factor as kelts compared with those who returned after one summer. These results suggest that sex-specific differences in individual post-spawning growth–survival t…

0106 biological sciencesFish migrationeducation.field_of_studybiologyurogenital system010604 marine biology & hydrobiologyPopulationAquatic Sciencebiology.organism_classification010603 evolutionary biology01 natural sciencesLife stageFisheryBrown troutSalmoResilience (network)educationCondition dependentEcology Evolution Behavior and SystematicsCanadian Journal of Fisheries and Aquatic Sciences
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Facebook groups as citizen science tools for plant species monitoring

2021

I social network sono canali di comunicazione utilizzati per condividere enormi quantità di dati, che possono essere utilizzati per la ricerca scientifica, anche nel campo della biodiversità. Per sapere quanto i dati ricavati dai social network possono integrare quelli raccolti per scopi scientifici, è necessario individuarne i bias. Utilizzando i dati estratti da un gruppo Facebook specializzato nella flora vascolare siciliana, abbiamo analizzato quali sono i caratteri che aumentano la probabilità che una pianta spontanea venga fotografata e postata su un social network. A tal fine, abbiamo confrontato frequenze e attributi delle specie fotografate dai membri del gruppo Facebook con quelli…

0106 biological sciencesFloraFacebookEcologySocial networkdatabasesbusiness.industryEnvironmental resource managementMediterranean010603 evolutionary biology01 natural sciencesfloraGeographyplant traitsSettore BIO/03 - Botanica Ambientale E ApplicataPlant speciesCitizen sciencesocial networkPlant traitsbusinessSicily010606 plant biology & botanydatabases European Vegetation Archive (EVA) Facebook flora Mediterranean plant traits Sicily social networkEuropean Vegetation Archive (EVA)
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Functional genomics of arbuscular mycorrhiza : decoding the symbiotic cell programme

2004

More extensive insight into plant genes involved in the symbiotic programme of arbuscular mycorrhiza is presently being achieved by global approaches that aim to discover novel genes or subsets of genes that are essential to cell programmes in the different steps of plant–fungal interactions. The strategy of functional genomics based on large-scale differential RNA expression analyses (differential-display reverse transcriptase - PCR), electronic Northerns, suppressive subtractive hybridization, DNA chips) is presented, with a focus on arbuscular mycorrhiza in Pisum sativum and Medicago truncatula. The most recent knowledge about gene networks that are modulated in roots during arbuscular …

0106 biological sciencesGene regulatory networkPlant Science01 natural sciences[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/Botanics03 medical and health sciencesGene expressionBotanyGeneComputingMilieux_MISCELLANEOUS030304 developmental biology2. Zero hungerLUERNE0303 health sciencesbiologyfungifood and beverages[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanicsbiology.organism_classificationMedicago truncatulaGENOMIQUEArbuscular mycorrhizaSuppression subtractive hybridizationDNA microarrayFunctional genomics010606 plant biology & botany
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Distance decay 2.0 – a global synthesis of taxonomic and functional turnover in ecological communities

2021

AbstractUnderstanding the variation in community composition and species abundances, i.e., β-diversity, is at the heart of community ecology. A common approach to examine β-diversity is to evaluate directional turnover in community composition by measuring the decay in the similarity among pairs of communities along spatial or environmental distances. We provide the first global synthesis of taxonomic and functional distance decay along spatial and environmental distance by analysing 149 datasets comprising different types of organisms and environments. We modelled an exponential distance decay for each dataset using generalized linear models and extracted r2 and slope to analyse the streng…

0106 biological sciencesGeneralized linear modelDistance decayCommunity010604 marine biology & hydrobiology15. Life on land010603 evolutionary biology01 natural sciencesLatitudeExponential functionSimilarity (network science)Environmental scienceMarine ecosystem14. Life underwaterPhysical geographySpatial extent
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Genome reduction and potential metabolic complementation of the dual endosymbionts in the whitefly Bemisia tabaci

2015

Background The whitefly Bemisia tabaci is an important agricultural pest with global distribution. This phloem-sap feeder harbors a primary symbiont, “Candidatus Portiera aleyrodidarum”, which compensates for the deficient nutritional composition of its food sources, and a variety of secondary symbionts. Interestingly, all of these secondary symbionts are found in co-localization with the primary symbiont within the same bacteriocytes, which should favor the evolution of strong interactions between symbionts. Results In this paper, we analyzed the genome sequences of the primary symbiont Portiera and of the secondary symbiont Hamiltonella in the B. tabaci Mediterranean (MED) species in orde…

0106 biological sciencesHamiltonellaCandidatus Portiera aleyrodidarum[SDV]Life Sciences [q-bio]Molecular Sequence DataWhiteflyPortiera010603 evolutionary biology01 natural sciencesGenomeHemiptera03 medical and health sciencesMetabolic complementationSymbiosisEnterobacteriaceaeBotanyGeneticsAnimalsAmino AcidsSymbiosisIn Situ Hybridization Fluorescence030304 developmental biology2. Zero hungerGenetics0303 health sciencesEndosymbiontGenomebiologyfungifood and beveragesHigh-Throughput Nucleotide SequencingDNASequence Analysis DNAVitaminsbiochemical phenomena metabolism and nutritionbiology.organism_classificationEnterobacteriaceaeHemipteraWhiteflyComplementationHalomonadaceaeGlobal distribution[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]Genome BacterialMetabolic Networks and PathwaysBiotechnologyResearch ArticleBMC Genomics
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From Metaphor to Practice: Operationalizing the Analysis of Resilience Using System Dynamics Modelling

2017

This paper operationalizes an analysis of resilience for social-ecological systems using system dynamics (SD) modelling. Resilience is a versatile concept that continues to gain popularity among researchers who study ways to reduce the vulnerability of social-ecological systems to a wide range of disturbances. However, its application in the policymaking domain still remains underdeveloped because it is difficult to understand the mechanisms that might enhance resilience and to measure the impact of potential policies. This paper proposes to use SD modelling as a tool to analyse resilience using simulations to quantify system response to disturbances and a causal analysis to identify ways t…

0106 biological sciencesInformation Systems and ManagementOperationalizationManagement scienceMetaphorStrategy and Managementmedia_common.quotation_subject05 social sciencesVulnerabilityGeneral Social Sciences01 natural sciencesPopularitySystem dynamics010601 ecology0502 economics and businessSocio-ecological systemSet (psychology)Resilience (network)Psychology050203 business & managementmedia_commonSystems Research and Behavioral Science
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Seaport competitiveness research: the past, present and future

2019

This study presents a review of articles with a focus on seaport competitiveness from the maritime literature. We investigated how port competitiveness research has evolved during the last two decades using bibliometric citation analysis tools and techniques. Bibliography data, collected from the ISI Web of Science database, consisted of 267 research papers by 465 authors in 117 journals. Based on citation analysis, we identified the key universities, journals and articles and their impact on port competitiveness research. Also, seven key research streams with few sub-streams were revealed as a result of a mixed co-citation and in-depth content analysis of the most cited articles. A bibliom…

0106 biological sciencesIsi web of scienceKey articlesKnowledge managementbusiness.industry010604 marine biology & hydrobiologyTransportation010501 environmental sciencesManagement Science and Operations Research01 natural sciencesPort (computer networking)Citation analysisContent analysisPolitical scienceManagement of Technology and InnovationKey (cryptography)Strategic researchPort managementBusiness and International ManagementbusinessGeneralLiterature_REFERENCE(e.g.dictionariesencyclopediasglossaries)0105 earth and related environmental sciencesInternational Journal of Shipping and Transport Logistics
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CRISPR-mediated strand displacement logic circuits with toehold-free DNA

2021

DNA nanotechnology, and DNA computing in particular, has grown extensively over the past decade to end with a variety of functional stable structures and dynamic circuits. However, the use as designer elements of regular DNA pieces, perfectly complementary double strands, has remained elusive. Here, we report the exploitation of CRISPR-Cas systems to engineer logic circuits based on isothermal strand displacement that perform with toehold-free double-stranded DNA. We designed and implemented molecular converters for signal detection and amplification, showing good interoperability between enzymatic and nonenzymatic processes. Overall, these results contribute to enlarge the repertoire of su…

0106 biological sciencesLetterTranscription GeneticComputer scienceStreptococcus pyogenesRibonuclease HBiomedical EngineeringDNA Single-StrandedNanotechnology01 natural sciencesBiochemistry Genetics and Molecular Biology (miscellaneous)Displacement (vector)law.invention03 medical and health sciencesSynthetic biologychemistry.chemical_compoundComputers MolecularDNA computinglaw010608 biotechnologyCRISPR-Associated Protein 9Biological computingDNA nanotechnologyCRISPRNanotechnologyClustered Regularly Interspaced Short Palindromic RepeatsGene Regulatory NetworksDNA nanotechnologySynthetic biology030304 developmental biologyElectronic circuit0303 health sciencesGeneral MedicineRibonuclease PancreaticchemistryLogic gatebiological computingsynthetic biologyCRISPR-Cas SystemsEndopeptidase KGenetic EngineeringDNARNA Guide Kinetoplastida
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Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions

2009

46 pages, 4 tables, 6 figures, 3 additinoal files.

0106 biological sciencesMESH: Genome PlantArabidopsis thalianaGene regulatory networkArabidopsis01 natural sciencesTranscriptomeGene Expression Regulation PlantArabidopsisMESH: Gene Expression Regulation DevelopmentalCluster AnalysisGene Regulatory NetworksMESH: ArabidopsisMESH: EcosystemMESH: Models GeneticOligonucleotide Array Sequence AnalysisMESH: Gene Regulatory NetworksGenetics0303 health sciencesMESH: Stress MechanicalbiologyMESH: Genomicsfood and beveragesGene Expression Regulation DevelopmentalGenomicsPhenotypeAlgorithmsGenome PlantMESH: MutationSystems biologyGenomicsMESH: AlgorithmsComputational biologyMESH: Arabidopsis ProteinsMESH: Phenotype03 medical and health sciencesMESH: Gene Expression Profiling[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMESH: Gene Expression Regulation PlantEcosystem030304 developmental biologyModels GeneticMicroarray analysis techniquesArabidopsis ProteinsGene Expression ProfilingResearchfungiRobustness (evolution)biology.organism_classificationMESH: Cluster AnalysisGene expression profilingMutationMESH: Oligonucleotide Array Sequence AnalysisStress Mechanical010606 plant biology & botany
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The effects of data collection and observation methods on uncertainty of social networks in wild primates

2020

International audience; In social species, network centralities of group members shape social transmission and other social phenomena. Different factors have been found to influence the measurement of social networks, such as data collection and observation methods. In this study, we collected data on adults and juveniles and examined the effect of data collection method (ad libitum sampling vs. focal animal sampling) and observation method (interaction—grooming; play—vs. association—arm‐length; 2 m; 5 m proximities—) on social networks in wild vervet monkeys. First, we showed using a bootstrapping method, that uncertainty of ad libitum grooming and play matrices were lesser than uncertaint…

0106 biological sciencesMaleComputer sciencePooling010603 evolutionary biology01 natural sciencesCorrelationStatisticsChlorocebus aethiopsAnimals0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyProxy (statistics)Social BehaviorSocial network analysisEcology Evolution Behavior and SystematicsSocialityData collectionBehavior AnimalBootstrappingData Collection05 social sciencesSampling (statistics)GroomingPlay and Playthings[SDE]Environmental SciencesAnimal Science and ZoologyFemaleBehavior Observation Techniques
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