Search results for "nucleolus"

showing 10 items of 53 documents

NOR regions of polychaete worms of the genus Ophryotrocha studied by chromosome banding techniques and FISH.

2000

This article reports the results of cytogenetic analyses carried out on 10 species of polychaete worms belonging to the genus Ophryotrocha (Dorvilleidae). Nucleolar organizer regions (NORs) were characterized by Ag staining, C-banding, CMA3 staining, and ribosomal fluorescent in situ hybridization (rDNA FISH). Extensive intraspecific variation in NOR number and distribution were observed in O. costlowi, O. sp. macrovifera, O. notoglandulata, O.l. labronica, O. l. pacifica (2n = 6), O. p. puerilis, O. diadema (2n = 8), O. hartmanni, O. gracilis (2n = 10). In O. sp. robusta (2n = 10), Ag-NORs were always located on a single chromosome pair. CMA3 staining suggests a possible trend toward a GC-…

PolychaeteSilver StainingbiologyHeterochromatinZoologyKaryotypePolychaetaAnatomyRibosomal RNAbiology.organism_classificationDNA RibosomalChromosome BandingGenusKaryotypingGeneticsNucleolus Organizer RegionAnimalsNucleolus organizer regionDiademaMolecular BiologyGenome sizeGenetics (clinical)In Situ Hybridization FluorescenceBiotechnologyThe Journal of heredity
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Reading the Evolution of Compartmentalization in the Ribosome Assembly Toolbox: The YRG Protein Family.

2016

Reconstructing the transition from a single compartment bacterium to a highly compartmentalized eukaryotic cell is one of the most studied problems of evolutionary cell biology. However, timing and details of the establishment of compartmentalization are unclear and difficult to assess. Here, we propose the use of molecular markers specific to cellular compartments to set up a framework to advance the understanding of this complex intracellular process. Specifically, we use a protein family related to ribosome biogenesis, YRG (YlqF related GTPases), whose evolution is linked to the establishment of cellular compartments, leveraging the current genomic data. We analyzed orthologous proteins …

ProteomesArchaeal ProteinsMycologyBioenergeticsResearch and Analysis MethodsBiochemistryMicrobiologyMolecular EvolutionGTP PhosphohydrolasesEvolution MolecularFungal ProteinsEukaryotic EvolutionBacterial ProteinsFungal EvolutionAnimalsMolecular Biology TechniquesMolecular BiologyEnergy-Producing OrganellesCell NucleusEvolutionary BiologyMolecular Biology Assays and Analysis TechniquesBacterial EvolutionBiology and Life SciencesProteinsPhylogenetic AnalysisBacteriologyNucleolusCell BiologyOrganismal EvolutionCell CompartmentationMitochondriaProtein TransportMicrobial EvolutionCellular Structures and OrganellesRibosomesResearch ArticlePloS one
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An Organometallic Gold(I) Bis‐N‐Heterocyclic Carbene Complex with Multimodal Activity in Ovarian Cancer Cells

2020

Abstract The organometallic AuI bis‐N‐heterocyclic carbene complex [Au(9‐methylcaffeine‐8‐ylidene)2]+ (AuTMX2) was previously shown to selectively and potently stabilise telomeric DNA G‐quadruplex (G4) structures. This study sheds light on the molecular reactivity and mode of action of AuTMX2 in the cellular context using mass spectrometry‐based methods, including shotgun proteomics in A2780 ovarian cancer cells. In contrast to other metal‐based anticancer agents, this organogold compound is less prone to form coordinative bonds with biological nucleophiles and is expected to exert its drug effects mainly by non‐covalent interactions. Global protein expression changes of treated cancer cell…

ProteomicsNucleolusCancer | Very Important PaperContext (language use)Antineoplastic Agents010402 general chemistryProteomicsG-quadruplex01 natural sciencesCatalysischemistry.chemical_compoundgold complexesCaffeineCell Line TumorOrganometallic CompoundscancerHumansN-heterocyclic carbenesShotgun proteomicsMode of actionOvarian NeoplasmsFull Paper010405 organic chemistryChemistryOrganic ChemistryGeneral ChemistryFull PaperstelomeresG-quadruplexes0104 chemical sciencesddc:BiochemistryCancer cellFemaleGoldCarbeneMethane
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Non-coding RNAs at the Eukaryotic rDNA Locus: RNA–DNA Hybrids and Beyond

2019

The human ribosomal DNA (rDNA) locus encodes a variety of long non-coding RNAs (lncRNAs). Among them, the canonical ribosomal RNAs that are the catalytic components of the ribosomes, as well as regulatory lncRNAs including promoter-associated RNAs (pRNA), stress-induced promoter and pre-rRNA antisense RNAs (PAPAS), and different intergenic spacer derived lncRNA species (IGSRNA). In addition, externally encoded lncRNAs are imported into the nucleolus, which orchestrate the complex regulation of the nucleolar state in normal and stress conditions via a plethora of molecular mechanisms. This review focuses on the triplex and R-loop formation aspects of lncRNAs at the rDNA locus in yeast and hu…

R-loopNucleolusBiologyDNA RibosomalRibosome03 medical and health scienceschemistry.chemical_compound0302 clinical medicineStructural BiologyTranscription (biology)YeastsHumansMolecular BiologyRibosomal DNA030304 developmental biologyGenetics0303 health sciencesRibosomal RNANon-coding RNAchemistryDNA IntergenicRNA Long NoncodingR-Loop StructuresCell Nucleolus030217 neurology & neurosurgeryDNADNA DamageJournal of Molecular Biology
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Characterization of mitotic chromosomes of four species of the genus Diplodus: Karyotypes and chromosomal nucleolar organizer region phenotypes

1996

Karyotypes have been described in four Mediterranean species of the genus Diplodus (Teleostei, Sparidae), D. vulgaris, D. puntazzo, D. sargus and D. annularis. Chromosomes were mainly acrocentric in all but D. vulgaris, where certain chromosome pairs were subtelocentric. A remarkable intraspecific heteromorphism in the number of NOR-bearing chromosomes along with a substantial interspecific variability in position of chromosomal Ag signals have been encountered. The presumed origin of multiple NOR-bearing chromosomes in Diplodus species and variation of the NOR location is discussed. ? 1996 The Fisheries Society of the British Isles

Settore BIO/07 - EcologiabiologyEcologyChromosomeKaryotypebanded chromosomeDiplodusAquatic Sciencebiology.organism_classificationNucleolar Organizer RegionIntraspecific competitionkaryologyGenusEvolutionary biologyDiploduNucleolus organizer regionSparidaeEcology Evolution Behavior and SystematicsSargus
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Studies on sea urchin oocytes. II. Synthesis of RNA during oogenesis.

1972

Abstract Isolated oocytes of the sea urchin Paracentrotus lividus actively incorporate 3H-uridine into RNA. Labeled RNA was analysed by sucrose gradient and acrylamide gel electrophoresis following cell fractionation. Much of the radioactivity is incorporated at the nucleolar level in the form of rRNA precursors. The kinetics of maturation of these latter suggests that this occurs at a slower rate than during embryogenesis. Other non-nucleolar RNA classes are also actively labelled and retained in the nucleus for many hours. These results are confirmed by an autoradiographic investigation.

SucroseTime FactorsBiologyCell FractionationTritiumOogenesisParacentrotus lividusbiology.animalBotanyCentrifugation Density GradientAnimalsPolyacrylamide gel electrophoresisSea urchinUridineOvumCell NucleusHistocytochemistryEmbryogenesisRNACell BiologyRibosomal RNAbiology.organism_classificationElectrophoresis DiscMolecular WeightBiochemistryRNA RibosomalSea UrchinsAutoradiographyRNAFemaleCell fractionationCell NucleolusExperimental cell research
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Correlations between the Presence of Hurthle Cells and Cytomorphological Features of Fine-Needle Aspiration Biopsy in Thyroid Nodules

2019

INTRODUCTION: The presence of Hürthle cells (HC) in fine needle thyroid biopsy (FNAB) is a real concern for a cytologist and also for an endocrinologist. We aimed to demonstrate if the presence of HC is associated with specific cytological features in FNAB results. MATERIAL AND METHODS: This retrospective study analyzed 89 patients diagnosed with thyroid nodules, with FNAB; were two groups of patients: the study group A (HC+) (22 patients) with HC and control group B (HC-) (67 patients) with no HC; for both groups we analyzed the presence of 9 cytomorphologic features: overall cellularity, background colloid, lymphocyte infiltration, chronic inflammation, large nucleoli, small nucleoli, syn…

Thyroid nodulesPathologymedicine.medical_specialtymedicine.diagnostic_testEndocrine and Autonomic Systemsbusiness.industryNucleolusEndocrinology Diabetes and MetabolismThyroidmedicine.diseaseMalignancyEndocrinologymedicine.anatomical_structureFine-needle aspirationFibrosisBiopsyAtypiamedicinebusinessLetter to the EditorActa Endocrinologica (Bucharest)
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Time-Lapse Dynamics of the Mouse Oocyte Chromatin Organisation during Meiotic Resumption

2014

In the mammalian oocyte, distinct patterns of centromeres and pericentromeric heterochromatin localisation correlate with the gamete’s developmental competence. Mouse antral oocytes display two main types of chromatin organisation: SN oocytes, with a ring of Hoechst-positive chromatin surrounding the nucleolus, and NSN oocytes lacking this ring. When matured to MII and fertilised, only SN oocytes develop beyond the 2-cell, and reach full term. To give detailed information on the dynamics of the SN or NSN chromatin during meiosis resumption, we performed a 9 hr time-lapse observation. The main significant differences recorded are: (1) reduction of the nuclear area only in SN oocytes; (2) ~17…

Time FactorsArticle SubjectNucleoluslcsh:MedicinePerivitelline spaceBiologyTime-Lapse ImagingGeneral Biochemistry Genetics and Molecular BiologyMiceProphaseMeiosisCentromeremedicineAnimalsCells CulturedGeneticsGeneral Immunology and Microbiologylcsh:RGeneral MedicineOocyteChromatinCell biologyChromatinMeiosismedicine.anatomical_structureOocytesGameteFemaleResearch ArticleBioMed Research International
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Electron Microscopic Contrast of the Cytoskeleton and Junctional Complexes of Intestinal Epithelial Cells by Ethanolic Phosphotungstic Acid

2000

After glutaraldehyde fixation and treatment with ethanolic phosphotungstic acid (E-PTA) before plastic embedding, sections of rat large intestine showed a characteristic electron contrasting pattern in epithelial cells. The axis of microvilli, terminal web, a thin band below the luminal plasma membrane, centrioles and junctional complexes (tight junctions, adherens junctions, and desmosomes) appeared highly contrasted. In addition to protein components of microfilaments and intermediate filaments, proteins from the junctional complexes could also be implicated in the contrasting reaction with E-PTA. Mitochondrial membranes, chromatin masses, and nucleoli of enterocytes showed considerable e…

Tissue FixationBiologyMicrofilamentSpecimen HandlingAdherens junctionTerminal webGlycocalyxchemistry.chemical_compoundAnimalsIntestine LargePhosphotungstic acidIntestinal MucosaRats WistarCytoskeletonIntermediate filamentCytoskeletonEthanolMicrovilliStaining and LabelingTissue EmbeddingTight junctionEpithelial CellsPhosphotungstic AcidAgricultural and Biological Sciences (miscellaneous)ChromatinMitochondriaRatsCell biologySolutionsMicroscopy ElectronIntercellular JunctionschemistrySolventsAnatomyCell NucleolusEuropean Journal of Morphology
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DNA amplification in sea urchin oocytes.

1978

In situ hybridization of ribosomal RNA withParacentrotus lividus ovaries suggests that ribosomal DNA undergoes amplification in the mononucleolate oocytes of this sea urchin.

biologyurogenital systemNucleolusIn situ hybridizationRibosomal RNADna amplificationMolecular biologyCell biology5S ribosomal RNAbiology.animalembryonic structuresGeneticsRibosomal DNASea urchinDevelopmental biologyDevelopmental BiologyWilhelm Roux's archives of developmental biology
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