Search results for "omics"
showing 10 items of 17130 documents
Predation on Multiple Trophic Levels Shapes the Evolution of Pathogen Virulence
2009
The pathogen virulence is traditionally thought to co-evolve as a result of reciprocal selection with its host organism. In natural communities, pathogens and hosts are typically embedded within a web of interactions with other species, which could affect indirectly the pathogen virulence and host immunity through trade-offs. Here we show that selection by predation can affect both pathogen virulence and host immune defence. Exposing opportunistic bacterial pathogen Serratia marcescens to predation by protozoan Tetrahymena thermophila decreased its virulence when measured as host moth Parasemia plantaginis survival. This was probably because the bacterial anti-predatory traits were traded o…
Distribution of Caulerpa taxifolia var. distichophylla (Sonder) Verlaque, Huisman & Procaccini in the Mediterranean Sea
2019
The Non-Indigenous Species (NIS) Caulerpa taxifolia var. distichophylla (Sonder) Verlaque, Huisman & Procaccini has been reported for the first time in the Mediterranean Sea along the coast of South Turkey. This NIS is actively expanding into the Eastern and Western Mediterranean Sea. In this paper, we present an overview of the current distribution of this alga in the Mediterranean Sea, based on relevant scientific publications, grey literature and personal observations. New records from the Sicilian coast (Italy) are also reported. Caulerpa taxifolia var. distichophylla was found over a wide range of environmental conditions (depth, light and substratum), suggesting a broad ecolog…
Predicting the invasion of the acoustic niche: Potential distribution and call transmission efficiency of a newly introduced frog in Cuba
2021
8 pages; International audience; Leptodactylus fragilis is a recently introduced frog in Cuba, where it may impact local populations of amphibians in different ways. Here, we combined two methods to predict the invasion of the acoustic niche of Cuban amphibians by L. fragilis. We first use species distribution models to predict the spread and establishment of L. fragilis in Cuba. We then performed sound propagation experiments to evaluate the potential invasion of the acoustic niche in predicted suitable areas for the presence of L. fragilis. This species could have a successful establishment, spreading mainly in open areas, where its advertisement calls propagate efficiently, with low atte…
Novel subpopulations in date palm (Phoenix dactylifera) identified by population-wide organellar genome sequencing
2019
Background The date palm is one of the oldest cultivated fruit trees. The tree can withstand high temperatures and low water and the fruit can be stored dry offering nutrition across the year. The first region of cultivation is believed to be near modern day Iraq, however, where and if the date palm was domesticated is still a topic of debate. Recent studies of chloroplast and genomic DNA revealed two major subpopulations of cultivars centered in both the Eastern range of date palm cultivation including Arabian Peninsula, Iraq and parts of South Asia, and the Western range, including North Africa. Results To better understand the origins of date palm cultivation we sequenced and analyzed ov…
Wine Fermentation
2019
Currently wineries are facing new challenges due to actual market demands for creation of products exhibiting more individual flavors[...]
Experimental size-selective harvesting affects behavioral types of a social fish
2019
In most fisheries, larger fish experience substantially higher mortality than smaller fish. Body length, life history, and behavioral traits are often correlated, such that fisheries-induced changes in size or life history can also alter behavioral traits. However, empirical evidence regarding how size-selective harvesting alters the evolution of behavioral traits in exploited stocks is scarce. We used experimental lines of Zebrafish Danio rerio that were exposed to positively size-selective, negatively size-selective, or random harvest over five generations. Our aim was to investigate whether simulated fishing changed the mean personality of the surviving females five generations after ini…
“A cleaner break”: Genetic divergence between geographic groups and sympatric phenotypes revealed in ballan wrasse (Labrus bergylta)
2020
Abstract Capture and long‐distance translocation of cleaner fish to control lice infestations on marine salmonid farms has the potential to influence wild populations via overexploitation in source regions, and introgression in recipient regions. Knowledge of population genetic structure is therefore required. We studied the genetic structure of ballan wrasse, a phenotypically diverse and extensively used cleaner fish, from 18 locations in Norway and Sweden, and from Galicia, Spain, using 82 SNP markers. We detected two very distinct genetic groups in Scandinavia, northwestern and southeastern. These groups were split by a stretch of sandy beaches in southwest Norway, representing a habitat…
Chemical–Physical, sensory analyses and consumers’ quality perception of local vs. imported loquat fruits: a sustainable development perspective
2020
Local products and their distribution through short supply chains play a key role in the sustainable development of many rural areas, as affirmed by the 2030 Food and Agriculture Organization of the United Nations (FAO) Agenda. Moreover, in the last years, more and more consumers have shown a specific interest towards local production, pushed by the need for healthy eating, protecting the environment, and boosting the local economy. However, the cultivation of local fruit varieties or ecotypes has considerably decreased in the last decades because of their low production potential. As a result, many farmers have been forced to replace local orchards with few worldwide grown cultivars, causi…
The evolution, diversity and host associations of rhabdoviruses
2015
Metagenomic studies are leading to the discovery of a hidden diversity of RNA viruses, but new approaches are needed predict the host species these poorly characterised viruses pose a risk to. The rhabdoviruses are a diverse family of RNA viruses that includes important pathogens of humans, animals and plants. We have discovered the sequences of 32 new rhabdoviruses through a combination of our own RNA sequencing of insects and searching public sequence databases. Combining these with previously known sequences we reconstructed the phylogeny of 195 rhabdovirus sequences producing the most in depth analysis of the family to date. In most cases we know nothing about the biology of the viruses…
Phytoplasmosis of bioenergy cultures
2018
The current state of biofuel distribution in EU, USA and Ukraine and its perspectives, new alternative sources of renewable energy, advantages and disadvantages of their use have been analyzed in this review. The concept growing of energy cultures in Ukraine has been described. Prospects for the use of bioenergy cultures of the 2nd generation have been considered. Particular attention has been paid to advantages and peculiarities of growing cultures with high potential of productivity - willow and poplar. The role of phytoplasmas in plant pathology has been considered; the pathways of distribution of plant phytoplasmosis, their localization in plant-host cells, typical symptoms of plants af…