Search results for "oxidation"

showing 10 items of 1913 documents

Differences between cysteine and homocysteine in the induction of deoxyribose degradation and DNA damage.

2001

The effect of two naturally occurring thiols, such as cysteine and homocysteine, has been examined for their ability to induce deoxyribose degradation and DNA damage. Copper(II) ions have been added to incubation mixtures and oxygen consumption measurements have been performed in order to correlate the observed damaging effects with the rate of metal catalyzed thiol oxidation. Ascorbic acid plus copper has been used as a positive control of deoxyribose and DNA oxidation due to reactive oxygen species. Cysteine or homocysteine in the presence of copper ions induce the degradation of deoxyribose and the yield of 8-hydroxy-2'-deoxyguanosine (8-OHdG), although important differences are observed…

DNA damageAscorbic AcidThymus GlandBiochemistrySuperoxide dismutasechemistry.chemical_compoundOxygen ConsumptionPhysiology (medical)DeoxyguanosineAnimalsCysteineHomocysteineElectrophoresis Agar GelbiologyDeoxyriboseSuperoxide DismutaseThiourea8-Hydroxy-2'-deoxyguanosineDeoxyguanosineDNA oxidationAscorbic acidCatalasechemistryDeoxyriboseBiochemistry8-Hydroxy-2'-DeoxyguanosineSpectrophotometrybiology.proteinCattleReactive Oxygen SpeciesOxidation-ReductionCopperCysteineDNA DamageFree radical biologymedicine
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Experimental and theoretical studies on thymine photodimerization mediated by oxidatively generated DNA lesions and epigenetic intermediates.

2020

[EN] Interaction of nucleic acids with light is a scientific question of paramount relevance not only in the understanding of life functioning and evolution, but also in the insurgence of diseases such as malignant skin cancer and in the development of biomarkers and novel light-assisted therapeutic tools. This work shows that the UVA portion of sunlight, not absorbed by canonical DNA nucleobases, can be absorbed by 5-formyluracil (ForU) and 5-formylcytosine (ForC), two ubiquitous oxidatively generated lesions and epigenetic intermediates present in living beings in natural conditions. We measure the strong propensity of these molecules to populate triplet excited states able to transfer th…

DNA damagePhotochemistryUltraviolet RaysBasesGeneral Physics and AstronomyPyrimidine dimer010402 general chemistry01 natural sciencesNucleobaseEpigenesis Geneticchemistry.chemical_compoundTriplet energy-transferCytosineQUIMICA ORGANICAMoleculeEpigeneticsPhysical and Theoretical ChemistryUracil010405 organic chemistryDimer formation0104 chemical sciencesThymineDynamicsDamagePhotophysicschemistryBiophysicsNucleic acidSunlightMechanismPhotosensitizationDimerizationOxidation-ReductionDNAThymineDNA DamagePhysical chemistry chemical physics : PCCP
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DNA damage photo-induced by chloroharmine isomers: hydrolysis versus oxidation of nucleobases

2018

Photodynamic therapy (PDT) is an emerging clinical treatment currently being used against a wide range of both cancerous and noncancerous diseases. The search for new active photosensitizers as well as the development of novel selective delivery systems are the major challenges faced in the application of PDT. We investigated herein three chloroharmine derivatives (6-, 8- and 6,8-dichloroharmines) with quite promising intrinsic photochemical tunable properties and their ability to photoinduce DNA damage in order to elucidate the underlying photochemical mechanisms. Data revealed that the three compounds are quite efficient photosensitizers. The overall extent of photo-oxidative DNA damage i…

DNA damagemedicine.medical_treatmentSubstituentPhotodynamic therapyAntineoplastic Agents010402 general chemistryRing (chemistry)01 natural sciencesBiochemistryNucleobase//purl.org/becyt/ford/1 [https]Hydrolysischemistry.chemical_compoundIsomerism//purl.org/becyt/ford/1.4 [https]medicineDNA Breaks Single-StrandedPhysical and Theoretical ChemistryPurine metabolismClinical treatmentPhotosensitizing Agents010405 organic chemistryHydrolysisOrganic ChemistryCiencias QuímicasCombinatorial chemistry0104 chemical sciencesHarmineQuímica OrgánicachemistryPhotochemotherapyβ-CarbolinesDNA damageChlorineOxidation-ReductionCIENCIAS NATURALES Y EXACTASDNA Damage
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Psychrotolerant Sulfate-reducing Bacteria from an Oxic Freshwater Sediment Description of Desulfovibrio cuneatus sp. nov. and Desulfovibrio litoralis…

1998

The most abundant culturable sulfate-reducing bacteria were isolated from the littoral sediment of the oligotrophic Lake Stechlin. The strains STL1 and STL4 were obtained from the oxic uppermost layer, while strain STL6 was isolated from the anoxic zone in 20 to 30 mm depth. The isolates showed a striking morphological feature in tapering off at one end of the cell. Physiological characteristics related them to the genus Desulfovibrio. They contained desulfoviridin. H2, formate, pyruvate, lactate, and fumarate were utilized with sulfate, sulfite, thiosulfate, or elemental sulfur as electron acceptors. All isolates were able to reduce oxygen and survived 120 h of aeration. However, aerobic g…

DNA BacterialGeologic SedimentsMolecular Sequence DataHydrogensulfite reductasechemistry.chemical_elementFresh WaterBiologyDNA RibosomalPolymerase Chain ReactionApplied Microbiology and BiotechnologyMicrobiologyMicrobiologychemistry.chemical_compoundNephelometry and TurbidimetryGermanyMicroscopy Phase-ContrastOxidoreductases Acting on Sulfur Group DonorsHydrogensulfite ReductaseSulfate-reducing bacteriaPhylogenyEcology Evolution Behavior and SystematicsThiosulfateBase SequenceSulfatesRespirationSequence Analysis DNAbiology.organism_classification16S ribosomal RNASulfurAnoxic watersDesulfovibrioMicroscopy ElectronchemistryCytochromesDesulfovibrioWater MicrobiologyOxidation-ReductionBacteriaSystematic and Applied Microbiology
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In vitro and in vivo sulfate reduction in the gut contents of the termite Mastotermes darwiniensis and the rose-chafer Pachnoda marginata.

2005

Sulfate-reducing bacteria (SRB) from termites have been assigned to the genus Desulfovibrio. Desulfovibrio intestinalis lives in the gut of the Australian termite Mastotermes darwiniensis. For the first time we were able to enrich and identify a sulfate-reducing bacterium from the gut of the rose-chafer Pachnoda marginata, which showed the highest 16S rDNA sequence identity (93%) to Desulfovibrio intestinalis and Desulfovibrio strain STL1. Compared to Mastotermes darwiniensis (1x10(7) cells of SRB per ml gut contents), sulfate-reducing bacteria occurred in higher numbers in the gut contents of Pachnoda marginata reaching cell titers of up to 2x10(8) cells per ml gut contents. In vitro sulfa…

DNA BacterialSulfur metabolismIsopteraBiologyApplied Microbiology and BiotechnologyMicrobiologyPachnoda marginataPolymerase Chain ReactionMicrobiologychemistry.chemical_compoundMastotermes darwiniensisRNA Ribosomal 16SAnimalsSulfatePhylogenyBase SequenceSulfatesRibosomal RNAbiology.organism_classification16S ribosomal RNADesulfovibrioColeopterachemistryDesulfovibrioDigestive SystemOxidation-ReductionSequence AlignmentBacteriaThe Journal of general and applied microbiology
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In vitro antioxidant properties, DNA damage protective activity, and xanthine oxidase inhibitory effect of cajaninstilbene acid, a stilbene compound …

2010

The antioxidant properties, DNA damage protective activities, and xanthine oxidase (XOD) inhibitory effect of cajaninstilbene acid (CSA) derived from pigeon pea leaves were studied in the present work. Compared with resveratrol, CSA showed stronger antioxidant properties, DNA damage protective activity, and XOD inhibition activity. The IC(50) values of CSA for superoxide radical scavenging, hydroxyl radical scavenging, nitric oxide scavenging, reducing power, lipid peroxidation, and XOD inhibition were 19.03, 6.36, 39.65, 20.41, 20.58, and 3.62 μM, respectively. CSA possessed good protective activity from oxidative DNA damage. Furthermore, molecular docking indicated that CSA was more poten…

DNA BacterialXanthine OxidaseAntioxidantDNA damagemedicine.medical_treatmentAllopurinolResveratrolBiologyAntioxidantsNitric oxideLipid peroxidationchemistry.chemical_compoundCajanusStilbenesmedicineHumansEnzyme InhibitorsXanthine oxidasechemistry.chemical_classificationPlant ExtractsAntimutagenic AgentsGeneral ChemistrySalicylatesPlant LeavesEnzymechemistryBiochemistryGeneral Agricultural and Biological Sciencesmedicine.drugDNA DamageJournal of agricultural and food chemistry
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Experimental conditions affect the site of tetrazolium violet reduction in the electron transport chain of Lactococcus lactis

2009

The reduction of tetrazolium salts to coloured formazans is often used as an indicator of cell metabolism during microbiology studies, although the reduction mechanisms have never clearly been established in bacteria. The objective of the present study was to identify the reduction mechanisms of tetrazolium violet (TV) in Lactococcus lactis using a mutagenesis approach, under two experimental conditions generally applied in microbiology: a plate test with growing cells, and a liquid test with non-growing (resting) cells. The results showed that in both tests, TV reduction resulted from electron transfer from an intracellular donor (mainly NADH) to TV via the electron transport chain (ETC), …

DNA Bacterial[SDV]Life Sciences [q-bio]Tetrazolium SaltsMicrobiologyElectron Transport03 medical and health scienceschemistry.chemical_compoundElectron transfer030304 developmental biology0303 health sciencesbiology030306 microbiologyLactococcus lactisNADH dehydrogenaseNADH DehydrogenaseVitamin K 2biology.organism_classificationNADElectron transport chainCulture MediaLactococcus lactisMutagenesis InsertionalMembranechemistryBiochemistryGenes Bacterialbiology.proteinFormazanOxidation-ReductionIntracellularBacteria
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The Chaperone Activity of Clusterin is Dependent on Glycosylation and Redox Environment

2014

Background/Aims: Clusterin (CLU), also known as Apolipoprotein J (ApoJ) is a highly glycosylated extracellular chaperone. In humans it is expressed from a broad spectrum of tissues and related to a plethora of physiological and pathophysiological processes, such as Alzheimer's disease, atherosclerosis and cancer. In its dominant form it is expressed as a secretory protein (secreted CLU, sCLU). During its maturation, the sCLU-precursor is N-glycosylated and cleaved into an α- and a β-chain, which are connected by five symmetrical disulfide bonds. Recently, it has been demonstrated that besides the predominant sCLU, rare intracellular CLU forms are expressed in stressed cells. Since these for…

DNA ComplementaryGlycosylationGlycosylationPhysiologyMutantCarbohydrateslcsh:Physiologylcsh:Biochemistrychemistry.chemical_compoundChaperonesHumanslcsh:QD415-436Redox biologySecretory pathwaylcsh:QP1-981ClusterinbiologyRetro-translocationProprotein convertaseProteostasis networkOxidative StressClusterinSecretory proteinHeat shockchemistryBiochemistryApolipoprotein JChaperone (protein)Proteolysisbiology.proteinOxidation-ReductionIntracellularMolecular ChaperonesFurin-like proprotein convertasesCellular Physiology and Biochemistry
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Traditionally used Thai medicinal plants: in vitro anti-inflammatory, anticancer and antioxidant activities.

2009

In order to assess traditional Thai claims about the therapeutic potential of medicinal plants and to select plants for future phytochemical research, nine plant species with anti-inflammatory uses were selected from Thai textbooks and assessed for their in vitro anti-inflammatory, antiproliferative and antioxidant activities.Nuclear factor-kappaB (NF-kappaB) inhibitory effects in stably transfected HeLa cells were determined by luciferase assay, and effects on LPS-induced pro-inflammatory mediators prostaglandin E2 (PGE2), interleukin (IL)-6, IL-1beta, and tumour necrosis factor (TNF)alpha in primary monocytes were assessed by ELISA. Cytotoxic activities were examined against HeLa cells, h…

DPPHmedicine.drug_classCell SurvivalInterleukin-1betaAnti-Inflammatory AgentsPharmacognosyAsteraceaeTransfectionAnti-inflammatoryAntioxidantsDinoprostoneMonocytesHeLachemistry.chemical_compoundInhibitory Concentration 50MagnoliopsidaPhenolsDrug DiscoveryMedicineHumansGynuraPharmacologyPlants MedicinalTraditional medicinebiologyDose-Response Relationship Drugbusiness.industryInterleukin-6Plant ExtractsTumor Necrosis Factor-alphaNF-kappa Bbiology.organism_classificationThailandOroxylum indicumAntineoplastic Agents PhytogenicPolygonaceaeRhinacanthus nasutusPhytochemicalchemistryDrug Resistance NeoplasmBignoniaceaeLipid PeroxidationMedicine TraditionalInflammation MediatorsbusinessHeLa CellsJournal of ethnopharmacology
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CH4 oxidation in a boreal lake during the development of hypolimnetic hypoxia

2020

AbstractFreshwater ecosystems represent a significant natural source of methane (CH4). CH4 produced through anaerobic decomposition of organic matter (OM) in lake sediment and water column can be either oxidized to carbon dioxide (CO2) by methanotrophic microbes or emitted to the atmosphere. While the role of CH4 oxidation as a CH4 sink is widely accepted, neither the magnitude nor the drivers behind CH4 oxidation are well constrained. In this study, we aimed to gain more specific insight into CH4 oxidation in the water column of a seasonally stratified, typical boreal lake, particularly under hypoxic conditions. We used 13CH4 incubations to determine the active CH4 oxidation sites and the …

DYNAMICS010504 meteorology & atmospheric sciencesBoreal lake010501 environmental sciences01 natural sciencesSink (geography)Methanechemistry.chemical_compoundWater columnboreal lakeHypoxiaWater Science and TechnologyStable isotopesTotal organic carbonchemistry.chemical_classificationgeography.geographical_feature_categoryEcologymethanekerrostumatHypoxia (environmental)WATER COLUMNboreaalinen vyöhykekasvihuonekaasutGreenhouse gaseshypoksiaSUMMEREnvironmental chemistryCarbon dioxideHypolimnionMethaneSEDIMENTSResearch ArticlehapetusFLUXESoxidation119 Other natural sciencesstable isotopesAquatic ScienceCO2 CONCENTRATIONjärvetmetaanistratificationORGANIC-CARBONSTRATIFICATIONgreenhouse gasesOxidationOrganic matterEcology Evolution Behavior and Systematics1172 Environmental sciences0105 earth and related environmental sciences219 Environmental biotechnologyisotoopitgeographyhypoxiaCLIMATEchemistryEnvironmental scienceANAEROBIC METHANE OXIDATION
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