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showing 10 items of 15327 documents

Phylogeography and Molecular Evolution of Potato virus Y

2012

Potato virus Y (PVY) is an important plant pathogen, whose host range includes economically important crops such as potato, tobacco, tomato, and pepper. PVY presents three main strains (PVYO, PVYN and PVYC) and several recombinant forms. PVY has a worldwide distribution, yet the mechanisms that promote and maintain its population structure and genetic diversity are still unclear. In this study, we used a pool of 77 complete PVY genomes from isolates collected worldwide. After removing the effect of recombination in our data set, we used Bayesian techniques to study the influence of geography and host species in both PVY population structure and dynamics. We have also performed selection and…

0106 biological sciencesEvolutionary GeneticsAmino-acid sitesSelective constraintsPotyviruslcsh:Medicine01 natural sciencesAmino-Acid SitesRecombinant strainPlant RNA virusesNegative selectionMaximum-Likelihoodlcsh:Sciencepathologie végétaleSelective ConstraintsPhylogenyGenetics0303 health sciencesCoat proteinMultidisciplinaryNatural selectionVegetal BiologybiologyEcologyGenetic-structurePotyvirusfood and beveragesEuropePhylogeneticsVenous necrosisPhylogeographyPotato virus YBiogeographyVenous NecrosisSequence AnalysisResearch ArticlePlant RNA VirusesGenome ViralMicrobiologyEvolution Molecular03 medical and health sciencesGenetic-StructureMolecular evolutionVirologyMosaic-virus[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEvolutionary SystematicsBiology030304 developmental biologySolanum tuberosumGenetic diversityEvolutionary BiologyMosaic virusHost (biology)Maximum-likelihoodlcsh:RComputational Biologyvirus à de la pomme de terreBayes Theoremlégumebiology.organism_classificationMutational analysisMosaic-VirusMutational AnalysisEvolutionary EcologyRecombinant StrainNorth Americalcsh:QBiologie végétalePopulation Genetics010606 plant biology & botany
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Influence of agronomic practices and pre-harvest conditions on the attachment and development of Listeria monocytogenes in vegetables

2019

Interest in fresh vegetables is on the increase due to their protective effects against several diseases. Listeria monocytogenes is a human pathogen easily found in vegetables. The purpose of this review article is to analyse the influence of the agricultural practices applied in pre-harvest, the environmental biotic and abiotic factors characterising the cultivation field, as well as the handling procedures at harvest that might greatly influence the presence and the levels of L. monocytogenes in fresh produce. This review article describes the routes of L. monocytogenes infections in relation to the agricultural practices commonly applied during vegetable cultivation. It also analyses the…

0106 biological sciencesFresh produceHuman pathogenSettore AGR/04 - Orticoltura E FloricolturaBiologymedicine.disease_cause01 natural sciencesApplied Microbiology and BiotechnologyFood safety03 medical and health sciencesListeria monocytogenesMicrobial ecology010608 biotechnologyVegetablesmedicineListeria monocytogeneAbiotic component0303 health sciences030306 microbiologybusiness.industryContamination routeBiotechnologyAgricultural practiceAgriculturebusinessSettore AGR/16 - Microbiologia Agraria
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Ultrastructural and cell wall modifications during infection of Eucalyptus viminalis roots by a pathogenic Fusarium oxysporum strain

2004

Fusarium species are soil-borne fungal pathogens that produce a variety of disease symptoms when attacking crop plants. The mode of root colonization of Eucalyptus viminalis seedlings by a pathogenic F. oxyporum strain (Foeu1) at the ultrastructural level and changes in cell wall pectin during host pathogen interactions are described. Root systems of E. viminalis plants were inoculated with F. oxysporum in an in vitro model system. Hyphae of F. oxysporum adhered to the outer epidermal cell walls through fibrillar material, and after penetration they spread into the internal tissues. They developed intercellularly and intracellularly in the root cortex and invaded vascular tissues. Papillae …

0106 biological sciencesFusariumHypha[SDV]Life Sciences [q-bio]Plant Science01 natural sciencesMicrobiologyCell wall03 medical and health sciencesFusarium oxysporumRoot pathogenesisCiencias AgrariasVascular tissue030304 developmental biology2. Zero hunger0303 health sciencesEucalyptus viminalisbiologyfood and beveragesPathogenic fungusbiology.organism_classificationPectinFusarium oxysporumUltrastructureUltrastructurePhloemAgronomy and Crop Science010606 plant biology & botany
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Reciprocal Interaction Matrix Reveals Complex Genetic and Dose-Dependent Specificity among Coinfecting Parasites

2012

Understanding genetic specificity in factors determining the outcome of host-parasite interactions is especially important as it contributes to parasite epidemiology, virulence, and maintenance of genetic variation. Such specificity, however, is still generally poorly understood. We examined genetic specificity in interactions among coinfecting parasites. In natural populations, individual hosts are often simultaneously infected by multiple parasite species and genotypes that interact. Such interactions could maintain genetic variation in parasite populations if they are genetically specific so that the relative fitness of parasite genotypes varies across host individuals depending on (1) t…

0106 biological sciencesGenotypeVirulence010603 evolutionary biology01 natural sciencesDiplostomum pseudospathaceumHost Specificity03 medical and health sciencesGenotypeGenetic variationmedicineParasite hostingAnimalsEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health sciencesbiologyHost (biology)CoinfectionGenetic Variationmedicine.diseasebiology.organism_classification3. Good healthOncorhynchus mykissCoinfectionTrematodaTrematodaAmerican Naturalist
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Interactive effects between diet and genotypes of host and pathogen define the severity of infection

2012

Host resistance and parasite virulence are influenced by multiple interacting factors in complex natural communities. Yet, these interactive effects are seldom studied concurrently, resulting in poor understanding of host-pathogen-environment dynamics. Here, we investigated how the level of opportunist pathogen virulence, strength of host immunity and the host condition manipulated via diet affect the survival of wood tiger moth Parasemia plantaginis (Arctidae). Larvae from “low cuticular melanin” and “high cuticular melanin” (considered as low and high pathogen resistance, respectively) selection lines were infected with moderately and highly virulent bacteria strains of Serratia marcescen…

0106 biological sciencesGenotype-environment interactionVirulenceLactucaBiology010603 evolutionary biology01 natural sciencesMicrobiologyMelanin03 medical and health sciencesImmunityParasemia plantaginisBotanyPathogenEcology Evolution Behavior and SystematicsSerratia marcescens030304 developmental biologyNature and Landscape ConservationOriginal Research11832 Microbiology and virology0303 health sciencesimmunokompetenssilleimmunocompetenceEcologyintegumentary systemHost (biology)fungivirulenssiPlantago majorbiology.organism_classificationvirulenceSerratia marcescensta1181Parasemia plantaginissense organsGenotyyppi-ympäristö vuorovaikutusEcology and Evolution
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Spread of tomato brown rugose fruit virus in sicily and evaluation of the spatiotemporal dispersion in experimental conditions

2020

Tomato brown rugose fruit virus (ToBRFV) is an emerging pathogen that causes severe disease in tomato (Solanum lycopersicum L.) crops. The first ToBRFV outbreak in Italy occurred in 2018 in several Sicilian provinces, representing a serious threat for tomato production. In the present work, the spatiotemporal displacement of ToBRFV in Sicily was evaluated, analyzing a total of 590 lots of tomato seed, 982 lots of plantlets from nurseries and 100 commercial greenhouses. Furthermore, we investigated the ToBRFV spreading dynamic in a greenhouse under experimental conditions. Results showed several aspects related to ToBRFV dispersion in protected tomato crops. In detail, an important decrease …

0106 biological sciencesGreenhouseTomato brown rugose fruit virusBiology01 natural sciencesToBRFV epidemiologyPlantletCroplcsh:Agriculture03 medical and health sciencesEmerging pathogenTomato seed030304 developmental biology0303 health sciencesfungilcsh:SOutbreakfood and beveragesSettore AGR/12 - Patologia VegetaleDispersionbiology.organism_classificationHorticultureEmerging pathogenSolanumAgronomy and Crop Science010606 plant biology & botany
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Isolation and characterization of a Vitis vinifera transcription factor, VvWRKY1, and its effect on responses to fungal pathogens in transgenic tobac…

2007

International audience; Pathogen attack represents a major problem for viticulture and for agriculture in general. At present, the use of phytochemicals is more and more restrictive, and therefore it is becoming essential to control disease by having a thorough knowledge of resistance mechanisms. The present work focused on the trans-regulatory proteins potentially involved in the control of the plant defence response, the WRKY proteins. A full-length cDNA, designated VvWRKY1, was isolated from a grape berry library (Vitis vinifera L. cv. Cabernet Sauvignon). It encodes a polypeptide of 151 amino acids whose structure is characteristic of group IIc WRKY proteins. VvWRKY1 gene expression in …

0106 biological sciencesGénomique et Biotechnologie des FruitsPhysiologyTransgenesalicylic acid[SDV]Life Sciences [q-bio]Amino Acid MotifsMolecular Sequence DataWRKY transcription factorPlant ScienceGenetically modified cropsBiology01 natural sciences03 medical and health scienceschemistry.chemical_compoundplant resistance to pathogensGene Expression Regulation PlantComplementary DNABotanyGene expressionTobacco[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyVitisCloning MolecularPathogen030304 developmental biologyPlant Proteins2. Zero hungerGeneticschemistry.chemical_classification0303 health sciencesBase SequenceFungifood and beveragesPlants Genetically ModifiedWRKY protein domainImmunity InnateAmino acid[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacychemistrySalicylic acid010606 plant biology & botanyTranscription Factors
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Genome reduction and potential metabolic complementation of the dual endosymbionts in the whitefly Bemisia tabaci

2015

Background The whitefly Bemisia tabaci is an important agricultural pest with global distribution. This phloem-sap feeder harbors a primary symbiont, “Candidatus Portiera aleyrodidarum”, which compensates for the deficient nutritional composition of its food sources, and a variety of secondary symbionts. Interestingly, all of these secondary symbionts are found in co-localization with the primary symbiont within the same bacteriocytes, which should favor the evolution of strong interactions between symbionts. Results In this paper, we analyzed the genome sequences of the primary symbiont Portiera and of the secondary symbiont Hamiltonella in the B. tabaci Mediterranean (MED) species in orde…

0106 biological sciencesHamiltonellaCandidatus Portiera aleyrodidarum[SDV]Life Sciences [q-bio]Molecular Sequence DataWhiteflyPortiera010603 evolutionary biology01 natural sciencesGenomeHemiptera03 medical and health sciencesMetabolic complementationSymbiosisEnterobacteriaceaeBotanyGeneticsAnimalsAmino AcidsSymbiosisIn Situ Hybridization Fluorescence030304 developmental biology2. Zero hungerGenetics0303 health sciencesEndosymbiontGenomebiologyfungifood and beveragesHigh-Throughput Nucleotide SequencingDNASequence Analysis DNAVitaminsbiochemical phenomena metabolism and nutritionbiology.organism_classificationEnterobacteriaceaeHemipteraWhiteflyComplementationHalomonadaceaeGlobal distribution[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]Genome BacterialMetabolic Networks and PathwaysBiotechnologyResearch ArticleBMC Genomics
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The combined action of 9 lipoxygenase and galactolipase is sufficient to bring about programmed cell death during tobacco hypersensitive response

2005

International audience; Oxylipins, derived from fatty acid hydroperoxides (FAHs), are thought to play different roles during plant pathogen interactions. During hypersensitive response (HR) some of them serve as signals necessary for defence gene activation whereas others could contribute to pathogen killing or could participate in the execution of plant programmed cell death (PCD) associated with this resistance. In order to address the role of these compounds in the latter process, we have closely observed lipid peroxidation, the first step of this metabolic pathway, under different situations which led either to accelerated or inhibited HR cell death. The oxidative process has been studi…

0106 biological sciencesHypersensitive responseProgrammed cell deathPhysiologyPlant ScienceBiologyGALACTOLIPASE01 natural sciencesLipid peroxidation03 medical and health scienceschemistry.chemical_compoundLipoxygenaseRALSTONIA SOLANACEARUMGalactolipasePATATINUnsaturated fatty acid030304 developmental biologyHYPERSENSITIVE RESPONSE[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesTOBACCOfood and beveragesPROGRAMMED CELL DEATH[SDV.EE] Life Sciences [q-bio]/Ecology environmentMetabolic pathwayLIPID PEROXYDATIONBiochemistrychemistryApoptosisbiology.protein010606 plant biology & botany
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Different bacteria can enhance the micropropagation response of Cotoneaster lacteus (Rosaceae)

1998

C. MONIER, E. BOSSIS, C. CHABANET AND R. SAMSON. 1998. Cotoneaster species are widely used ornamental shrubs, and research is under way to select genotypes which are more resistant to fire blight by somaclonal variation. During the establishment of micropropagation, one genotype, Cotoneaster lacteus, showed the development of endogenous bacterial contaminants. Two strains were isolated from in vitro explants: Bacillus pumilus and Alcaligenes faecalis. These two strains, and some Pseudomonas fluorescens and Ps. putida, promoted in vitro multiplication and rooting of explants. In Pseudomonas strains, rooting enhancing capacity appeared to be related to indole-3-acetic acid (IAA) production, a…

0106 biological sciencesINTERACTION PLANTE PATHOGENEPseudomonas fluorescens01 natural sciencesApplied Microbiology and BiotechnologySomaclonal variation03 medical and health sciencesBotanyARBUSTE ORNEMENTALCotoneaster lacteus[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesbiologyBacillus pumilusfood and beveragesGeneral Medicinebiology.organism_classification[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyMicropropagationCotoneasterFire blight010606 plant biology & botanyBiotechnologyExplant culture
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