Search results for "pea"

showing 10 items of 6599 documents

Characterization of MRNP34, a novel methionine-rich nacre protein from the pearl oysters

2012

9 pages; International audience; Nacre of the Pinctada pearl oyster shells is composed of 98% CaCO(3) and 2% organic matrix. The relationship between the organic matrix and the mechanism of nacre formation currently constitutes the main focus regarding the biomineralization process. In this study, we isolated a new nacre matrix protein in P. margaritifera and P. maxima, we called Pmarg- and Pmax-MRNP34 (methionine-rich nacre protein). MRNP34 is a secreted hydrophobic protein, which is remarkably rich in methionine, and which is specifically localised in mineralizing the epithelium cells of the mantle and in the nacre matrix. The structure of this protein is drastically different from those …

0106 biological sciencesBiomineralizationCalcifying mantleMethionine-richMolecular Sequence DataClinical BiochemistryGene ExpressionBiologyMatrix (biology)engineering.materialProteomics010603 evolutionary biology01 natural sciencesBiochemistryLow complexity03 medical and health sciencesPaleontologychemistry.chemical_compoundCalcification PhysiologicMethionineAnimalsAmino Acid SequencePinctada[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsNacre030304 developmental biology0303 health sciencesMethionineViral matrix proteinOrganic ChemistryProteinsEpithelial Cells[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterialsbiology.organism_classificationProtein Structure TertiarychemistryBiochemistryengineeringMolluscMatrix proteinPearlBiomineralizationPinctada
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Broad-front migration leads to strong migratory connectivity in the lesser kestrel (Falco naumanni)

2019

Aim: Migratory animals regularly move between often distant breeding and non‐breeding ranges. Knowledge about how these ranges are linked by movements of individuals from different populations is crucial for unravelling temporal variability in population spatial structuring and for identifying environmental drivers of population dynamics acting at different spatio‐temporal scales. We performed a large‐scale individual‐based migration tracking study of an Afro‐Palaearctic migratory raptor, to determine the patterns of migratory connectivity of European breeding populations. Location: Europe, Africa. Methods: Migration data were recorded using different devices (geolocators, satellite transmi…

0106 biological sciencesBird migrationSpatial structureGPSSettore BIO/05 - ZoologiaKestrel010603 evolutionary biology01 natural sciencesNon‐breeding distribution03 medical and health sciencesSahelEuropean commissionZoologíaEcology Evolution Behavior and Systematics030304 developmental biologybird migration geolocators GPS non‐breeding distribution Sahel satellite telemetry spatial structure0303 health sciencesEcologybiologySatellite telemetrySpatial structureFalco naumannibiology.organism_classificationGeographySatellite telemetryChristian ministryGeolocatorsHumanities
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Lack of molluscan host diversity and the transmission of an emerging parasitic disease in Bolivia.

2001

Fasciolosis is a re-emerging parasitic disease that affects an increasing number of people in developing countries. The most severe endemic affects the Bolivian Altiplano, where the liver fluke (Fasciola hepatica) and its hermaphroditic snail host, Lymnaea truncatula, have been introduced from Europe. To achieve a better understanding of the epidemiological situation and the consequences of the colonization event of this invasive species, genetic analysis of Bolivian snail populations was needed. Here we compare the genetic diversity and population structure of snail samples from the Bolivian Altiplano with samples from the Old World at six polymorphic microsatellite loci. Whereas some vari…

0106 biological sciencesBoliviaOld WorldSnailsSnailBiology[Fasciola hepatica]010603 evolutionary biology01 natural sciencesHost-Parasite Interactions[microsatellites]03 medical and health sciencesbiology.animal[human disease]parasitic diseases[host–parasite interaction]GeneticsmedicineFasciola hepaticaAnimalsFasciolosisGenetic variabilityEcology Evolution Behavior and Systematics[Lymnaea truncatula]030304 developmental biology0303 health sciencesGenetic diversityHost (biology)Ecology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]fungi15. Life on landmedicine.diseasebiology.organism_classificationEuropeGenetics PopulationParasitic disease[invasive species]Microsatellite RepeatsMolecular ecology
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Specialist butterflies benefit most from the ecological restoration of mires

2016

Abstract Anthropogenic disturbances cause biotic homogenization through the replacement of specialist species with generalists. Restoration has the potential to counteract these negative effects. Recently, restoration in the peatlands of Northern Europe has started to show positive effects on biodiversity. However, seldom have studies evaluated the response of insects to restoration by comparing populations prior to restoration to those thereafter with a Before-After Control-Impact (BACI) design. The aim of this study was to evaluate whether the restoration actions taken were appropriate to facilitate the successful recolonization of mire butterflies and plants. We found that, generally, dr…

0106 biological sciencesBoloria aquilonarista1172BiodiversityGeneralist and specialist species010603 evolutionary biology01 natural sciencesspecialist speciesMireRestoration ecologyEcology Evolution Behavior and SystematicsNature and Landscape ConservationbiologyEcologypeatland restoration010604 marine biology & hydrobiologyfungiPlant community15. Life on landbiology.organism_classificationBACI-designbiotic homogenizationHabitatButterflyta1181butterfly communitiesdrainage for forestryBiological Conservation
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EUNIS Habitat Classification: Expert system, characteristic species combinations and distribution maps of European habitats

2020

Aim The EUNIS Habitat Classification is a widely used reference framework for European habitat types (habitats), but it lacks formal definitions of individual habitats that would enable their unequivocal identification. Our goal was to develop a tool for assigning vegetation-plot records to the habitats of the EUNIS system, use it to classify a European vegetation-plot database, and compile statistically-derived characteristic species combinations and distribution maps for these habitats. Location Europe. Methods We developed the classification expert system EUNIS-ESy, which contains definitions of individual EUNIS habitats based on their species composition and geographic location. Each ha…

0106 biological sciencesBos- en Landschapsecologiecoastal habitat ; diagnostic species ; distribution map ; dune vegetation European Nature Information System (EUNIS) ; European Vegetation Archive (EVA) ; expert system ; forest ; grassland ; habitat classification ; man-made habitat ; shrubland ; vegetation database ; vegetation plot ; wetlandBiodiversityDistribution (economics)Wetlandcomputer.software_genre01 natural sciencesGrasslandforestman-made habitatForest and Landscape EcologyPlant ecologybiodiversitygeography.geographical_feature_categoryEcologyVegetationPE&RCwetlandEuropeGeographyHabitathabitat classificationVegetatie Bos- en LandschapsecologieEuropaEuropean Nature Information System (EUNIS)Cartographydune vegetationvegetation plotHabitat (Ecology)databasescoastal habitat; diagnostic species; distribution map; dune vegetation; European Nature Information System (EUNIS); European Vegetation Archive (EVA); expert system; forest; grassland; habitat classification; man-made habitat; shrubland; vegetation database; vegetation plot; wetlandHàbitat (Ecologia)Management Monitoring Policy and Law010603 evolutionary biologyShrublanddistribution mapvegetationinvasionsvegetation database14. Life underwatercoastal habitat577: ÖkologieVegetatieNature and Landscape Conservationexpert systemforestsVegetationbusiness.industryEcologia vegetalwetland formalized classificationalien plants15. Life on landExpert systemfidelitydiagnostic speciesexampleVegetation Forest and Landscape Ecologygrassland[SDE.BE]Environmental Sciences/Biodiversity and Ecologybusinessman‐made habitatshrublandcomputer010606 plant biology & botanyEuropean Vegetation Archive (EVA)
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The value of by-catch data: how species-specific surveys can serve non-target species

2019

Camera trapping has a wide range of research application, but, while research designs are often focused on the study of a single focal species, cameras can also record other non-target species. Occupancy modeling using by-catch data can be a valuable resource to gain information on these species maximizing the scientific effort and efficiency of wildlife surveys. In this study, we used by-catch data from a European wildcat (Felis silvestris silvestris) survey in Southern Italy to assess the habitat covariates determinant for the occupancy of the crested porcupine (Hystrix cristata). We recorded 33 detections at 17 out of 51 cameras (naive occupancy = 0.33). The best models fitted the data w…

0106 biological sciencesCamera trappingOccupancyRange (biology)biology.animal_breedSettore BIO/05 - ZoologiaWildlifeManagement Monitoring Policy and Law010603 evolutionary biology01 natural sciences010605 ornithologyHystrix cristataCrested porcupineEcology Evolution Behavior and SystematicsNature and Landscape ConservationbiologyMt. EtnaOccupancybiology.organism_classificationBycatchGeographyHabitat useHabitatEuropean wildcatCamera trapCartographyEuropean Journal of Wildlife Research
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De novo genome assembly of the land snail Candidula unifasciata (Mollusca: Gastropoda)

2021

Abstract Among all molluscs, land snails are a scientifically and economically interesting group comprising edible species, alien species and agricultural pests. Yet, despite their high diversity, the number of genome drafts publicly available is still scarce. Here, we present the draft genome assembly of the land snail Candidula unifasciata, a widely distributed species along central Europe, belonging to the Geomitridae family, a highly diversified taxon in the Western-Palearctic region. We performed whole genome sequencing, assembly and annotation of an adult specimen based on PacBio and Oxford Nanopore long read sequences as well as Illumina data. A genome draft of about 1.29 Gb was gene…

0106 biological sciencesCandidula unifasciataAcademicSubjects/SCI01140AcademicSubjects/SCI00010repeatsPopulationSnailsSequence assemblySnailQH426-470de novo assemblyAcademicSubjects/SCI01180010603 evolutionary biology01 natural sciencesGenome03 medical and health sciencesbiology.animalland snailslong readsGeneticsAnimalseducationMolecular BiologyGeneGenetics (clinical)030304 developmental biologyWhole genome sequencingGeomitridaemolluscs0303 health scienceseducation.field_of_studyGenomebiologyLand snailMolecular Sequence AnnotationGenomicsSequence Analysis DNAbiology.organism_classificationGenome ReportannotationEvolutionary biologyAcademicSubjects/SCI00960G3: Genes|Genomes|Genetics
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Assessing sampling coverage of species distribution in biodiversity databases

2019

Abstract Aim Biodiversity databases are valuable resources for understanding plant species distributions and dynamics, but they may insufficiently represent the actual geographic distribution and climatic niches of species. Here we propose and test a method to assess sampling coverage of species distribution in biodiversity databases in geographic and climatic space. Location Europe. Methods Using a test selection of 808,794 vegetation plots from the European Vegetation Archive (EVA), we assessed the sampling coverage of 564 European vascular plant species across both their geographic ranges and realized climatic niches. Range maps from the Chorological Database Halle (CDH) were used as bac…

0106 biological sciencesChorological Database Halle (CDH)Range (biology)multi-scale[SDE.MCG]Environmental Sciences/Global Changesvegetation-plot databasesSpecies distributionPlant Science[SDV.BID]Life Sciences [q-bio]/Biodiversitycomputer.software_genre010603 evolutionary biology01 natural sciencesmacro-ecology333: Bodenwirtschaft und Ressourcen577: ÖkologieRealized niche widthMacroecologyEcological niche[SDV.EE]Life Sciences [q-bio]/Ecology environmentspatial scaleEcologyDatabaseNull modelvegetation plot databasesclimatic nichevascular plantSampling (statistics)species rangeVegetation15. Life on landDynamic Match Coefficient (DMC)sampling biasGeographyrealized niche1181 Ecology evolutionary biologymacroecology[SDE.BE]Environmental Sciences/Biodiversity and Ecologycomputer010606 plant biology & botanyEuropean Vegetation Archive (EVA)
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Succession in ant communities (Hymenoptera: Formicidae) in deciduous forest clear-cuts - an Eastern European case study

2017

Clear-cutting, the main method of harvesting in many forests in the world, causes a series of dramatic environmental changes to the forest habitat and removes habitat resources for arboreal and epigeal species. It results in considerable changes in the composition of both plant and animal communities. Ants have many critical roles in the maintenance and functioning of forest ecosystems. Therefore, the response of ants to clear-cutting and the time it takes for an ant community to recover after clear-cutting are important indicators of the effect of this harvesting technique on the forest ecosystem. We investigated ground-dwelling ant communities during secondary succession of deciduous fore…

0106 biological sciencesClearcuttingdeciduous forestsSecondary successionChronosequenceclear-cuttingantsEcological successionBiology010603 evolutionary biology01 natural sciencesForest ecologypitfall trapsAgroforestryEcologyfungifood and beveragessecondary successionbiochemical phenomena metabolism and nutritionformicidaeEastern european010602 entomologyQL1-991HabitatInsect SciencehymenopteraSpecies richnesscommunity structureZoologyEuropean Journal of Entomology
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Resource polymorphism in European whitefish: Analysis of fatty acid profiles provides more detailed evidence than traditional methods alone

2019

Published version, licensed CC BY-NC-ND 4.0. , available at: http://dx.doi.org/10.1371/journal.pone.0221338 Resource polymorphism—whereby ancestral generalist populations give rise to several specialised morphs along a resource gradient—is common where species colonise newly formed ecosystems. This phenomenon is particularly well documented in freshwater fish populations inhabiting postglacial lakes formed at the end of the last ice age. However, knowledge on how such differential exploitation of resources across contrasting habitats might be reflected in the biochemical compositions of diverging populations is still limited, though such patterns might be expected. Here, we aimed to assess …

0106 biological sciencesComposite ParticlesMarine and Aquatic SciencesPredationGeneralist and specialist species01 natural sciencesFood chainIsotopesvatsaFood Web StructurelakesMedicine and Health SciencesCoregonus albulaVDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497Trophic levelMultidisciplinaryEcologyfood.dishPhysicsStable IsotopesQStomachREukaryotafood web structureselkärangattomatGastrointestinal Contents6. Clean waterFood webTrophic InteractionsFreshwater FishCommunity Ecologyfreshwater fishVertebratesPhysical Sciencesresource polymorphismFreshwater fishMedicinepredationAnatomyNutritive ValueSalmonidaestomachResearch ArticleFreshwater EnvironmentsAtomsFAFood ChainSciencestable isotopesZoologyScandinavian and Nordic CountriesCoregonus lavaretusBiologyfatty acidsjärvet010603 evolutionary biologyfoodCoregonus lavaretusAnimals14. Life underwaterParticle PhysicsravintoketjutVDP::Landbruks- og Fiskerifag: 900::Fiskerifag: 920Coregonus albulatrophic interactionsEcological nicheisotoopit010604 marine biology & hydrobiologyEcology and Environmental SciencesOrganismsAquatic EnvironmentsBiology and Life SciencesFeeding BehaviorBodies of WaterVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497invertebratesbiology.organism_classificationInvertebratessaalistusGastrointestinal TractLakesFishEuropean whitefishsiikaEarth SciencesDigestive SystemravintoverkotPLOS ONE
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