Search results for "phylogeny"
showing 10 items of 1398 documents
The genetic heritage of Alpine local cattle breeds using genomic SNP data
2020
Abstract Background Assessment of genetic diversity and population structure provides important control metrics to avoid genetic erosion, inbreeding depression and crossbreeding between exotic and locally-adapted cattle breeds since these events can have deleterious consequences and eventually lead to extinction. Historically, the Alpine Arc represents an important pocket of cattle biodiversity with a large number of autochthonous breeds that provide a fundamental source of income for the entire regional economy. By using genotype data from medium-density single nucleotide polymorphism (SNP) arrays, we performed a genome-wide comparative study of 23 cattle populations from the Alpine Arc an…
Digeneans of cetaceans: taxonomy, evolutionary history and host specificity.
2016
Parasitism is an extremely successful lifestyle among animals. In fact, every free-living organism is believed to harbour at least a parasite species, and cetaceans are not the exception. Host-parasite systems offer a suitable model for studying systematics, evolution, biogeography and ecology because the evolutionary fate of parasites is linked to that of their hosts. In particular, present-day associations between cetaceans and their parasites have been shaped by unique historical events. The parasites of the terrestrial ancestors of cetaceans likely faced an ecological barrier when their hosts colonized the marine environment; it is postulated that during the process terrestrial parasite…
Phylogeny, epidemiology and microhabitat preferences of lungworms (Pseudaliidae) in cetaceans from teh Western Mediterranean
2023
A pesar de tener una cierta reputación negativa, los parásitos pueden ofrecer una información importante sobre sus hospedadores, habiendo sido reconocidos como herramientas valiosas en varios estudios que investigan el comportamiento (Balbuena y Raga 1991), la salud (Aznar et al. 2005; Gkafas et al. 2020), la dieta (Dailey y Otto 1982), la migración (Ten et al. 2022), la estructura social (Balbuena et al. 1995) o la discriminación de stocks de cetáceos (Aznar et al. 1995). Los helmintos que parasitan a los cetáceos se pueden separar en cuatro grupos distintos: acantocéfalos (20 spp.), cestodos (38 spp.), digeneos (54 spp.) y nematodos (62 spp.). De éstos, los nematodos son los más diversos …
Lactobacillus vini sp. nov., a wine lactic acid bacterium homofermentative for pentoses.
2006
Six strains with more than 99·5 % 16S rRNA gene sequence similarity, identical internal spacer region profiles and restriction analysis of the amplified 16S rRNA gene patterns were isolated from fermenting grape musts during independent studies carried out in France and Spain many years apart. Strains are Gram-positive, motile, facultatively anaerobic rods that do not exhibit catalase activity and have the ability to utilize pentose sugars (ribose and/or l-arabinose), although they are homofermentative bacteria. Strains ferment pentoses exclusively yielding lactic acid as the end product. A broad set of molecular techniques has been applied to characterize these strains and the results show…
Phylogenetic and biogeographical inferences for Pancratium (Amaryllidaceae), with an emphasis on the Mediterranean species based on plastid sequence …
2012
The phylogenetics and biogeography of Pancratium (Amaryllidaceae) were investigated, with a focus on the Mediterranean and adjacent areas, with the aim of contributing new information towards a better understanding of the evolutionary history of the genus and the taxonomic placement of P. linosae and P. hirtum. To address these questions, we sequenced four plastid DNA markers: the ndhF and rbcL genes, the trnL(UAA)-trnF(GAA) intergenic spacer and the trnL(UAA) intron, analysing them using parsimony, likelihood and Bayesian approaches. The results show that the relationships among the majority of the species are resolved; however, the relationships of one of the major clades of the genus are…
Phenazine antibiotics produced by fluorescent pseudomonads contribute to natural soil suppressiveness to Fusarium wilt
2009
Natural disease-suppressive soils provide an untapped resource for the discovery of novel beneficial microorganisms and traits. For most suppressive soils, however, the consortia of microorganisms and mechanisms involved in pathogen control are unknown. To date, soil suppressiveness to Fusarium wilt disease has been ascribed to carbon and iron competition between pathogenic Fusarium oxysporum and resident non-pathogenic F. oxysporum and fluorescent pseudomonads. In this study, the role of bacterial antibiosis in Fusarium wilt suppressiveness was assessed by comparing the densities, diversity and activity of fluorescent Pseudomonas species producing 2,4-diacetylphloroglucinol (DAPG) (phlD+) …
Molecular phylogeny of the genus Chondrina (Gastropoda, Panpulmonata, Chondrinidae) in the Iberian Peninsula
2022
[EN] Chondrina Reichenbach, 1828 is a highly diverse genus of terrestrial molluscs currently including 44 species with about 28 subspecific taxa. It is distributed through North Africa, central and southern Europe, from Portugal in the West to the Caucasus and Asia Minor in the East. Approximately 70% of the species are endemic to the Iberian Peninsula constituting its main center of speciation with 34 species. This genus includes many micro endemic taxa, some of them not yet described, confined to limestone habitats (being strictly rock-dwelling species). They are distributed on rocky outcrops up to 2000 m.a.s.l. It is a genus of conical-fusiform snails that differ mainly in shell characte…
Phylogenetic relationships of the Italian populations of Horseshoe Whip Snake Hemorrhois hippocrepis (Serpentes, Colubridae)
2020
Hemorrhois hippocrepis is a colubrid snake with a West Mediterranean distribution. It is widespread in the Iberian Peninsula and Northwest Africa. The only Italian populations are found on the islands of Sardinia and Pantelleria. The phylogenetic relationships of these insular populations have been analysed for the first time on the basis of the mitochondrial DNA cytochrome b gene. The sequences were compared with those available from the geographic range of this species. The analyses showed that the Italian samples are part of a lineage that groups Tunisian and East Algerian samples, with which they share the same haplotype. These results strongly support the hypothesis of a recent origin …
Methylophilaceae and Hyphomicrobium as target taxonomic groups in monitoring the function of methanol-fed denitrification biofilters in municipal was…
2017
Abstract Molecular monitoring of bacterial communities can explain and predict the stability of bioprocesses in varying physicochemical conditions. To study methanol-fed denitrification biofilters of municipal wastewater treatment plants, bacterial communities of two full-scale biofilters were compared through fingerprinting and sequencing of the 16S rRNA genes. Additionally, 16S rRNA gene fingerprinting was used for 10-week temporal monitoring of the bacterial community in one of the biofilters. Combining the data with previous study results, the family Methylophilaceae and genus Hyphomicrobium were determined as suitable target groups for monitoring. An increase in the relative abundance …
Revised classification of the New World Cylapini (Heteroptera: Miridae: Cylapinae): taxonomic review of the genera Cylapinus, Cylapoides and Peltidoc…
2021
Cylapini, as currently circumscribed, is a relatively small group of plant bugs currently comprising 17 genera and 65 species. Most representatives of the tribe are distributed in the New World (10 genera and 47 species) with other members occurring in the Afrotropical, Oriental, and Australian regions. They have primarily tropical and subtropical distributions with only a few members inhabiting temperate regions. This paper provides a taxonomic review of three of the New World Cylapini genera: Cylapinus Carvalho, 1986, Cylapoides Carvalho, 1952, and Peltidocylapus Poppius, 1909. Most species are diagnosed and redescribed. Eight new species are described as new: Cylapinus yasunagai sp. nov.…