Search results for "phylogeny"

showing 10 items of 1398 documents

Morphological and molecular diversity patterns of the genus Tropodiaptomus Kiefer, 1932 (Copepoda, Calanoida, Diaptomidae) in Thailand

2022

AbstractTropodiaptomus is one of the most specious genera in the family Diaptomidae, but it is often rare in terms of distribution and abundance. Moreover, Tropodiaptomus species show a noteworthy variability in some of the morphological characters considered of prime importance in diaptomid taxonomy, and the presence of cryptic or pseudocryptic species is likely. Thus, through a geographically-wide sampling in Thailand, we aimed to investigate the local diversity of the genus and to compare the morphological and molecular diversity pattern based on mitochondrial and nuclear genes sequences. DNA taxonomy was also implemented in order to check whether the Tropodiaptomus lineages were indepen…

MaleMultidisciplinaryScienceQRSettore BIO/05 - ZoologiaThailandDNA MitochondrialCopepodaEvolution MolecularMedicineAnimalsFemaleSequence AlignmentPhylogeny
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Lung-worms (Nematoda: Pseudaliidae) of harbour porpoises (Phocoena phocoena) in Norwegian waters: patterns of colonization

1994

SUMMARYWe studied the component community of lung-worms of the harbour porpoise, attempting to establish the relative importance of ecological and evolutionary factors on its development. The lungs of 64 porpoises by-caught in Norwegian waters were examined for helminths. Three pseudaliid species were detected. The porpoises appear to be readily colonized by lung-worms, the structure of the component community of calves being fairly similar to that of the remainder. Prenatal and/or transmammary infections might partly account for these early infections. However, host age was correlated with the number of lung-worm species, suggesting that the lung-worms may have heteroxenous cycles similar …

MaleNematodaLung Diseases ParasiticDolphinsCetaceaPhocoenaBiologybiology.animalparasitic diseasesPrevalenceAnimalsHelminthsNematode InfectionsLungPhylogenyPhylogenetic treeNorwayEcologyAge FactorsSpecies diversitybiology.organism_classificationColonisationInfectious DiseasesFemaleAnimal Science and ZoologyParasitologySpecies richnessPorpoiseParasitology
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Finding of Parastrongylus cantonensis (Chen, 1935) in Rattus rattus in Tenerife, Canary Islands (Spain).

2010

Parastrongylus cantonensis is a parasite of murid rodents that can infect humans and cause health problems as eosinophilic meningitis. Although it is endemic in south Asia, the Pacific islands, Australia, USA, and a few Caribbean islands, it has been extended to new geographical regions. In the Canary Islands (Spain) a survey of helminths of Rattus rattus, Rattus norvegicus and Mus musculus domesticus was carried out. Furthermore, five species of molluscs were examined for nematode larvae to determine whether they are potential intermediate hosts of P. cantonensis. Nematodes were found in the lungs of 15% of 67 R. rattus examined in Tenerife, one of the four studied islands, with a prevalen…

MaleNematodaVeterinary (miscellaneous)Molecular Sequence DataZoologyHelminth geneticsBiologyDNA RibosomalRodent DiseasesMiceDNA Ribosomal SpacermedicinePrevalenceRNA Ribosomal 18SHelminthsParasite hostingAnimalsCluster AnalysisInternal transcribed spacerMolluscaLungPhylogenyStrongylida InfectionsCaribbean islandBase SequenceAngiostrongylus cantonensisSequence Analysis DNARibosomal RNADNA Helminthmedicine.diseasebiology.organism_classificationRatsInfectious DiseasesMolluscaSpainInsect ScienceAngiostrongyliasisParasitologyFemaleSequence AlignmentActa tropica
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Ultraviolet vision in lacertid lizards: evidence from retinal structure, eye transmittance, SWS1 visual pigment genes, and behaviour

2014

Abstract Ultraviolet (UV) vision and UV colour patches have been reported in a wide range of taxa and are increasingly appreciated as an integral part of vertebrate visual perception and communication systems. Previous studies with Lacertidae, a lizard family with diverse and complex coloration, have revealed the existence of UV-reflecting patches that may function as social signals. However, confirmation of the signalling role of UV coloration requires demonstrating that the lizards are capable of vision in the UV waveband. Here we use a multidisciplinary approach to characterize the visual sensitivity of a diverse sample of lacertid species. Spectral transmission measurements of the ocula…

MaleOpsinVisual perceptiongenetic structuresUltraviolet RaysPhysiologyAquatic ScienceRetinaOpticsbiology.animalmedicineAnimalsLacertidaePhotopigmentMolecular BiologyPhylogenyVision OcularEcology Evolution Behavior and SystematicsRetinabiologyLizardbusiness.industryLizardsbiology.organism_classificationeye diseasesPodarcis muralismedicine.anatomical_structureMicroscopy FluorescenceEvolutionary biologyInsect ScienceOil dropletRetinal Cone Photoreceptor CellsVisual PerceptionAnimal Science and Zoologysense organsbusinessRetinal PigmentsJournal of Experimental Biology
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Exploring the potential of life-history key innovation: brook breeding in the radiation of the Malagasy treefrog genus Boophis

2002

The treefrog genus Boophis is one of the most species-rich endemic amphibian groups of Madagascar. It consists of species specialized to breeding in brooks (48 species) and ponds (10 species). We reconstructed the phylogeny of Boophis using 16S ribosomal DNA sequences (558 bp) from 27 species. Brook-breeders were monophyletic and probably derived from an ancestral pond-breeding lineage. Pond-breeders were paraphyletic. The disparity in diversification among pond-breeders and brook-breeders was notable among endemic Malagasy frogs, although it was not significant when considering Boophis alone. Sibling species which have different advertisement calls but are virtually indistinguishable by mo…

MaleParaphylyLineage (evolution)MantellidaeMolecular Sequence DataMantellidaeZoologyFresh WaterBreedingphylogenyAmphibiaMonophylysibling speciesGenusddc:570RNA Ribosomal 16SMadagascarGeneticsAnimalsPhylogenyEcology Evolution Behavior and SystematicsKey innovationLikelihood FunctionsbiologyReproductionGenetic Variationbiology.organism_classificationGenetic divergenceBoophisFemaleAnuraMolecular Ecology
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ABCC transporters mediate insect resistance to multiple Bt toxins revealed by bulk segregant analysis

2014

[EN] Background: Relatively recent evidence indicates that ABCC2 transporters play a main role in the mode of action of Bacillus thuringiensis (Bt) Cry1A-type proteins. Mapping of major Cry1A resistance genes has linked resistance to the ABCC2 locus in Heliothis virescens, Plutella xylostella, Trichoplusia ni and Bombyx mori, and mutations in this gene have been found in three of these Bt-resistant strains. Results: We have used a colony of Spodoptera exigua (Xen-R) highly resistant to a Bt commercial bioinsecticide to identify regions in the S. exigua genome containing loci for major resistance genes by using bulk segregant analysis (BSA). Results reveal a region containing three genes fro…

MalePhysiologyGenes InsectPlant ScienceBt resistanceInsecticide ResistanceHemolysin ProteinsStructural BiologyBacillus thuringiensisChromosome SegregationPhylogenyGeneticsbiologyAgricultural and Biological Sciences(all)LarvaFemaleGeneral Agricultural and Biological SciencesBiotechnologyResearch ArticleMolecular Sequence DataBacillus thuringiensisSpodopteraSpodopteraABCC2 transporterPolymorphism Single NucleotideGeneral Biochemistry Genetics and Molecular BiologyBacterial ProteinsExiguaAnimalsAmino Acid SequenceGeneEcology Evolution Behavior and SystematicsCrosses GeneticBombyxBacillus thuringiensis ToxinsBiochemistry Genetics and Molecular Biology(all)Gene Expression ProfilingfungiWild typeCell BiologySequence Analysis DNAbiology.organism_classificationBombyxMolecular biologyEndotoxinsKineticsGENETICACry1AcMembrane proteinATP-Binding Cassette TransportersCry toxinsDevelopmental Biology
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Post-Messinian evolutionary relationships across the Sicilian channel: Mitochondrial and nuclear markers link a new green toad from Sicily to African…

2008

19 páginas, 6 figuras y 3 tables

MalePleistoceneEvolutionAfrica; Animals; Biodiversity; Bufonidae; DNA Mitochondrial; Evolution Molecular; Female; Male; Phylogeny; RNA Ribosomal 16S; SicilyRange (biology)BiogeographyPLEISTOCENESettore BIO/05 - ZoologiaZoologyDNA MitochondrialPHYLOGEOGRAPHYEvolution MolecularRNA Ribosomal 16SDNA POLYMORPHISMMTDNAQH359-425AnimalsSicilyPhylogenyREPTILIAEcology Evolution Behavior and SystematicsmtDNAnDNA green toadSALINITY CRISISmtDNA control regionPOPULATION-GROWTHbiologyBufo balearicusFROGSBiodiversitybiology.organism_classificationBufonidaelanguage.human_languageCOALESCENTPhylogeographyAfricalanguageFemaleBUFO-VIRIDISMediterranean IslandsSicilianResearch ArticleBMC Evolutionary Biology
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Canal construction destroys the barrier between major European invasion lineages of the zebra mussel.

2002

Since the mid-1980s the zebra mussel, Dreissena polymorpha, Pallas 1771, has become the protagonist of a spectacular freshwater invasion in North America due to its large economic and biological impact. Several genetic studies on American populations have failed to detect any large-scale geographical patterns. In western Europe, where D. polymorpha has been a classical invader from the Pontocaspian since the early 19th century, the situation is strikingly different. Here, we show with genetic markers that two major western European invasion lineages with lowered genetic variability within and among populations can be discriminated. These two invasion lineages correspond with two separate na…

MalePopulation DynamicsZoologyEnvironmentDreissenaGeneral Biochemistry Genetics and Molecular BiologyPhylogeneticsGenetic variationAnimalsGenetic variabilityCrosses GeneticPhylogenyGeneral Environmental ScienceGeneral Immunology and MicrobiologybiologyEcologyGenetic VariationGeneral Medicinebiology.organism_classificationBivalviaBivalviaEuropeGenetics PopulationGenetic markerFacility Design and ConstructionZebra musselMicrosatelliteFemaleGeneral Agricultural and Biological SciencesMicrosatellite RepeatsResearch ArticleProceedings. Biological sciences
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Androglobin: a chimeric globin in metazoans that is preferentially expressed in mammalian testes

2012

Abstract: Comparative genomic studies have led to the recent identification of several novel globin types in the Metazoa. They have revealed a surprising evolutionary diversity of functions beyond the familiar O2 supply roles of hemoglobin and myoglobin. Here we report the discovery of a hitherto unrecognized family of proteins with a unique modular architecture, possessing an N-terminal calpain-like domain, an internal, circular permuted globin domain, and an IQ calmodulin-binding motif. Putative orthologs are present in the genomes of many metazoan taxa, including vertebrates. The calpain-like region is homologous to the catalytic domain II of the large subunit of human calpain-7. The glo…

MaleProtein subunitAmino Acid MotifsMolecular Sequence DataProtein domain610 Medicine & healthBiologyGenome10052 Institute of PhysiologyEvolution MolecularMice03 medical and health scienceschemistry.chemical_compound0302 clinical medicine1311 GeneticsTestisGene expressionGenetics1312 Molecular BiologyAnimalsHumansGene familyAmino Acid SequenceGlobinBiologyMolecular BiologyGenePhylogenyEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health sciencesCalpainRecombinant ProteinsGlobinsProtein Structure TertiaryChemistry1105 Ecology Evolution Behavior and SystematicsMyoglobinchemistryMultigene Family10076 Center for Integrative Human Physiology570 Life sciences; biologyCalmodulin-Binding ProteinsHuman medicineSequence Alignment030217 neurology & neurosurgeryResearch Article
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Tracking Five Millennia of Horse Management with Extensive Ancient Genome Time Series

2019

Summary Horse domestication revolutionized warfare and accelerated travel, trade, and the geographic expansion of languages. Here, we present the largest DNA time series for a non-human organism to date, including genome-scale data from 149 ancient animals and 129 ancient genomes (≥1-fold coverage), 87 of which are new. This extensive dataset allows us to assess the modern legacy of past equestrian civilizations. We find that two extinct horse lineages existed during early domestication, one at the far western (Iberia) and the other at the far eastern range (Siberia) of Eurasia. None of these contributed significantly to modern diversity. We show that the influence of Persian-related horse …

MaleRange (biology)BiologíaBreeding horsesBreedingGenomeDomestication0302 clinical medicinePaleobiologíaComputingMilieux_MISCELLANEOUSHistory AncientPhylogenyhorses0303 health sciencesDiversityGenomeAncient DNAanimal breedingBiological EvolutionmuleshumanitiesManagementEuropeDomestication animalEquestrian civilizationsEthnologyFemalemanagementequestrian civilizationsExtinct lineagesAsia[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and PrehistoryselectionMultiple allelesCaballosBiologyMulesArticleGeneral Biochemistry Genetics and Molecular Biologydiversity03 medical and health sciencesdomesticationCaballo de Przewalskiddc:570[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]AnimalsGenetic variationHorsesDNA AncientDomesticationSelectionancient DNAInstitut für Biochemie und Biologie030304 developmental biologyAnimal breedingSeries (stratigraphy)Genetic diversityGenetic VariationEquidaeGenéticaextinct lineagesAncient DNAdomestication ; selection ; equestrian civilizations ; horses ; ancient DNA ; mules ; animal breeding ; extinct lineages ; management ; diversityAnálisisancient DNA ; domestication ; animal breeding ; horses ; mules ; extinct lineages ; selection ; diversity ; management ; equestrian civilizations030217 neurology & neurosurgery
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