Search results for "plant root"

showing 10 items of 232 documents

Combined phosphate and nitrogen limitation generates a nutrient stress transcriptome favorable for arbuscular mycorrhizal symbiosis in M edicago trun…

2013

International audience; Arbuscular mycorrhizal (AM) symbiosis is stimulated by phosphorus (P) limitation and contributes to P and nitrogen (N) acquisition. However, the effects of combined P and N limitation on AM formation are largely unknown. Medicago truncatula plants were cultivated in the presence or absence of Rhizophagus irregularis (formerly Glomus intraradices) in P-limited (LP), N-limited (LN) or combined P- and N-limited (LPN) conditions, and compared with plants grown in sufficient P and N. The highest AM formation was observed in LPN, linked to systemic signaling by the plant nutrient status. Plant free phosphate concentrations were higher in LPN than in LP, as a result of cros…

0106 biological sciencesRhizophagus irregularisNitrogenPhysiologyPlant SciencePlant Roots01 natural sciencesPhosphatesPhosphorus metabolismTranscriptome03 medical and health scienceschemistry.chemical_compoundNutrientSymbiosisGene Expression Regulation PlantStress PhysiologicalMycorrhizaeMedicago truncatulaBotanyPlant defense against herbivory[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyPhosphate Transport ProteinsGlomeromycotaSymbiosisPlant Proteins030304 developmental biology2. Zero hunger0303 health sciencesbiologyTerpenesfungifood and beveragesPhosphorusPhosphatebiology.organism_classificationMedicago truncatulaErythritolchemistrySugar PhosphatesTranscriptomeSignal Transduction010606 plant biology & botanyNew Phytologist
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Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula

2004

To construct macro- and microarray tools suitable for expression profiling in root endosymbioses of the model legume Medicago truncatula, we PCR-amplified a total of 6048 cDNA probes representing genes expressed in uninfected roots, mycorrhizal roots and young root nodules [Nucleic Acids Res. 30 (2002) 5579]. Including additional probes for either tissue-specific or constitutively expressed control genes, 5651 successfully amplified gene-specific probes were used to grid macro- and to spot microarrays designated Mt6k-RIT (M. truncatula 6k root interaction transcriptome). Subsequent to a technical validation of microarray printing, we performed two pilot expression profiling experiments usin…

0106 biological sciencesRoot nodule[SDV]Life Sciences [q-bio]Plant Roots01 natural sciencesApplied Microbiology and BiotechnologyTranscriptomeADNCGene Expression Regulation PlantGene Expression Regulation FungalMycorrhizaeMedicagoPCR-basedComputingMilieux_MISCELLANEOUSOligonucleotide Array Sequence AnalysisPlant ProteinsExpressed Sequence Tags2. Zero hunger0303 health sciencesnodulin genesroot nodule symbiosisarbuscular mycorrhizafood and beveragesEquipment DesignGeneral MedicineMedicago truncatulaArbuscular mycorrhiza[SDV] Life Sciences [q-bio]expression profilingDNA microarrayBiotechnologyBioengineeringComputational biologyBiologySensitivity and Specificity03 medical and health sciencesComplementary DNABotanySymbiosisLeghemoglobin030304 developmental biologyGene Expression ProfilingfungiReproducibility of Resultsbiology.organism_classificationEquipment Failure AnalysisGene expression profilingphosphate transportercDNA array010606 plant biology & botany
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25S rDNA-based molecular monitoring of glomalean fungi in sewage sludge-treated field plots

2001

Recycling of sewage wastes in agriculture is likely to affect the biological activity of soils through contamination of ecosystems by pathogens and metallic or organic micropollutants. The impact of sewage sludge spreading under field conditions on arbuscular mycorrhiza (AM) formation by a community of glomalean fungi was evaluated using a nested polymerase chain reaction (PCR) and discriminating primers based on 25S rDNA polymorphisms to detect different fungal species within root systems. Medicago truncatula was grown in soil of field plots amended or not with a composted sewage sludge, spiked or not with organic or metallic micropollutants. Overall AM development in roots decreased with …

0106 biological sciencesSewageRoot systemPlant RootsPolymerase Chain Reaction01 natural sciencesMicrobiologyGLOMALESADN RIBOSOMIALSoil PollutantsDNA FungalSymbiosisRelative species abundance[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologySoil MicrobiologyComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and Systematics2. Zero hungerPollutantSewagebiologybusiness.industryEcologyfungiFungiAgricultureFabaceae04 agricultural and veterinary sciences15. Life on landContaminationbiology.organism_classificationArbuscular mycorrhizaBiodegradation Environmental[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyRNA Ribosomal13. Climate actionEnvironmental chemistrySoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesbusinessSludgeEnvironmental Monitoring010606 plant biology & botany
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Sucrose amendment enhances phytoaccumulation of the herbicide atrazine in Arabidopsis thaliana.

2006

International audience; Growth in the presence of sucrose was shown to confer to Arabidopsis thaliana (thale cress or mustard weed) seedlings, under conditions of in vitro culture, a high level of tolerance to the herbicide atrazine and to other photosynthesis inhibitors. This tolerance was associated with root-to-shoot transfer and accumulation of atrazine in shoots, which resulted in significant decrease of herbicide levels in the growth medium. In soil microcosms, application of exogenous sucrose was found to confer tolerance and capacity to accumulate atrazine in Arabidopsis thaliana plants grown on atrazine-contaminated soil, and resulted in enhanced decontamination of the soil. Applic…

0106 biological sciencesSucroseHealth Toxicology and MutagenesisArabidopsisSoluble sugars010501 environmental sciencesBiologyToxicologyPhotosynthesis01 natural sciencesPlant Rootschemistry.chemical_compoundSoilArabidopsisBotanyArabidopsis thalianaSoil PollutantsAtrazinePhotosynthesis[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces environmentEcosystem0105 earth and related environmental sciencesGrowth mediumHerbicides[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]fungifood and beveragesGeneral Medicinebiology.organism_classificationPollutionPhytoremediationPhytoremediationBiodegradation EnvironmentalchemistryShootAtrazineWeedPlant Shoots010606 plant biology & botany
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Decoupling of light intensity effects on the growth and development of C3 and C4 weed species through sucrose supplementation

2002

Light availability has a profound effect on plant growth and development. One of the ways to study the effects of light intensity on plant growth and development without the confounding problem of photosynthate availability is sucrose injection/supplementation. A greenhouse experiment was conducted to evaluate the effects of light levels (0% and 75% shade) and sucrose injection (distilled water or 150 g sucrose l(-1)) on three weed species: redroot pigweed (Amaranthus retroflexus L., C4), lambsquarters (Chenopodium album L., C3) and velvetleaf (Abutilon theophrasti Medic., C3). The average total sucrose uptake was 7.6 and 5.9 g per plant for 0% and 75% shading, respectively, representing 47…

0106 biological sciencesSucroseSucroseLightPhysiologyPlant DevelopmentPlant ScienceBiologyPhotosynthesisPlant Roots01 natural sciencesCHENOPODE[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/BotanicsChenopodiumchemistry.chemical_compoundDry weightBotanyDry matterMalvaceaeComputingMilieux_MISCELLANEOUS2. Zero hungerAmaranthusPlant Stemsfungifood and beverages04 agricultural and veterinary sciences[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/BotanicsPlants15. Life on landAMARANTEPlant LeavesLight intensityHorticulturechemistrySeedsShoot040103 agronomy & agriculture0401 agriculture forestry and fisheriesShadingWeed010606 plant biology & botanyJournal of Experimental Botany
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Interaction between Medicago truncatula and Pseudomonas fluorescens: evaluation of costs and benefits across an elevated atmospheric CO2.

2012

10 pages; International audience; Soil microorganisms play a key role in both plants nutrition and health. Their relation with plant varies from mutualism to parasitism, according to the balance of costs and benefits for the two partners of the interaction. These interactions involved the liberation of plant organic compounds via rhizodeposition. Modification of atmospheric CO2 concentration may affect rhizodeposition and as a consequence trophic interactions that bind plants and microorganisms. Positive effect of elevated CO2 on plants are rather well known but consequences for micoorganisms and their interactions with plants are still poorly understood. A gnotobiotic system has been devel…

0106 biological scienceslcsh:MedicineplantPlant Science01 natural sciencesPlant RootsPlant reproductionnitrogenPlant Microbiologyterrestrial ecosystem[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosislcsh:ScienceSoil Microbiology2. Zero hungerMutualism (biology)Abiotic componentPlant Growth and Development0303 health sciencesRhizospheredynamicMultidisciplinaryresponsebiologyEcologyfood and beveragesMedicago truncatulacarbon-dioxide;terrestrial ecosystem;development;dynamic;nitrogen;plant;soil;rhizosphere;response;Pseudomonas fluorescensSeedsSoil microbiologyEcosystem FunctioningResearch Article[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil studyPseudomonas fluorescensFlowers[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studycarbon-dioxidePseudomonas fluorescensMicrobiologyEcosystemsMicrobial Ecologysoil03 medical and health sciencesSymbiosisPlant-Environment InteractionsBotanyMedicago truncatulaSymbiosisBiologydevelopment030304 developmental biology[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyAnalysis of VarianceAtmospherePlant Ecologylcsh:RfungiComputational Biology15. Life on landCarbon Dioxidebiology.organism_classificationPlant LeavesAgronomylcsh:Q[SDE.BE]Environmental Sciences/Biodiversity and EcologyrhizosphereEcosystem Modeling010606 plant biology & botany[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Nitric oxide and glutathione impact the expression of iron uptake- and iron transport-related genes as well as the content of metals in A. thaliana p…

2012

International audience; Mounting evidence indicate that nitric oxide (NO) acts as a signaling molecule mediating iron deficiency responses through the upregulation of the expression of iron uptake-related genes. Accordingly, NO donors such as nitrosoglutathione (GSNO) were reported to improve the fitness of plants grown under iron deficiency. Here, we showed that glutathione, a by-product of GSNO, triggered the upregulation of the expression of iron uptake- and transport-related gene and an increase of iron concentration in Arabidopsis thaliana seedlings facing iron deficiency. Furthermore, we provided evidence that under iron deficiency, NO released by GSNO did not improve the root iron co…

0106 biological sciencesmineral contentShort CommunicationIron[SDV]Life Sciences [q-bio]ArabidopsisPlant ScienceGenes PlantNitric Oxide01 natural sciencesPlant RootsNitric oxideS-Nitrosoglutathione03 medical and health scienceschemistry.chemical_compoundDownregulation and upregulationGene Expression Regulation PlantArabidopsismineral deficienciesmedicineArabidopsis thalianaglutathione030304 developmental biologymineral uptakeRegulation of gene expression0303 health sciencesManganesebiologyArabidopsis Proteinsarabidopsis thalianaBiological TransportIron deficiencyGlutathioneIron Deficienciesbiology.organism_classificationmedicine.diseaseZincchemistryBiochemistryS-Nitrosoglutathione[SDE]Environmental Sciencesgene expressionCopper010606 plant biology & botany
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In Vitro Study of the Cytotoxic, Cytostatic, and Antigenotoxic Profile of Hemidesmus indicus (L.) R.Br. (Apocynaceae) Crude Drug Extract on T Lymphob…

2018

In traditional Indian medicine, the crude drug Hemidesmus indicus root—commonly known as Indian sarsaparilla—is used alone or in poly-herbal preparations for the treatment of a wide range of diseases. The present study focuses on the cancer chemopreventive and therapeutic potential of H. indicus extracts on an acute lymphoblastic leukemia cell line (CCRF-CEM). With this aim in mind, we subjected H. indicus roots to two subsequent extractions (hydro-alcoholic extraction and soxhlet extraction). As DNA damage is an important prerequisite for the induction of mutations/cancer by genotoxic carcinogens, cancer chemoprevention may be achieved by preventing genotoxicity. Through an integrated …

0301 basic medicineDNA damageCell SurvivalHealth Toxicology and MutagenesisPhytochemicalsHemidesmus indicus; cancer cells; apoptosis; cell cycle; genotoxicity; antigenotoxicityantigenotoxicitylcsh:MedicineCancer cellCrude drugPharmacologymedicine.disease_causeToxicologyProtective AgentsPlant RootsArticleNOHemidesmus indicus03 medical and health sciences0302 clinical medicineCell Line TumormedicineHumansCarcinogenHemidesmus indicusHemidesmusbiologyChemistryPlant Extractslcsh:RgenotoxicityapoptosisApoptosiHemidesmus indicuCell cyclePrecursor Cell Lymphoblastic Leukemia-Lymphomabiology.organism_classificationAntineoplastic Agents Phytogenic030104 developmental biologyApoptosis030220 oncology & carcinogenesisCancer cellcancer cellscell cycleGenotoxicity<i>Hemidesmus indicus</i>; cancer cells; apoptosis; cell cycle; genotoxicity; antigenotoxicityDNA DamageToxins
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Marinomonas spartinae sp. nov., a novel species with plant-beneficial properties.

2016

Two strains of Gram-stain-negative, chemo-organotrophic, aerobic and halophilic gammaproteobacteria, isolated from within the stem and roots of Spartina maritima in salt marshes from the south Atlantic Spanish coast, were found to represent a novel species in the genus Marinomonas through phylogenetic analysis of their 16S rRNA genes and phenotypic characterization. 16S rRNA gene sequences of the two strains shared < 96.2 % similarity with other Marinomonas species, with Marimonas alcarazii being the most similar in sequence. They required sodium ions for growth, were able to thrive at low (4 °C) temperatures and at salinities of 12–15 %, were unable to hydrolyse any tested macromolecule ex…

0301 basic medicineDNA BacterialMarinomonasMolecular Sequence DataBiologyPoaceaeMicrobiologyPlant Roots03 medical and health sciencesRNA Ribosomal 16SGammaproteobacteriaBotanyEndophytesSugarMarinomonasEcology Evolution Behavior and SystematicsPhylogenychemistry.chemical_classificationBase CompositionPhylogenetic treePlant StemsFatty AcidsNucleic Acid HybridizationGeneral MedicineSequence Analysis DNA16S ribosomal RNAbiology.organism_classificationHalophileAmino acidBacterial Typing Techniques030104 developmental biologychemistrySpainWetlandslipids (amino acids peptides and proteins)Spartina maritimaInternational journal of systematic and evolutionary microbiology
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Identification and characterization of durum wheat microRNAs in leaf and root tissues.

2017

MicroRNAs are a class of post-transcriptional regulators of plant developmental and physiological processes and responses to environmental stresses. Here, we present the study regarding the annotation and characterization of MIR genes conducted in durum wheat. We characterized the miRNAome of leaf and root tissues at tillering stage under two environmental conditions: irrigated with 100% (control) and 55% of evapotranspiration (early water stress). In total, 90 microRNAs were identified, of which 32 were classified as putative novel and species-specific miRNAs. In addition, seven microRNA homeologous groups were identified in each of the two genomes of the tetraploid durum wheat. Differenti…

0301 basic medicineDifferential expression analysisBiology580 Plants (Botany)Triticum turgidumGenomePlant Roots03 medical and health sciencesGene Expression Regulation PlantStress PhysiologicalSettore AGR/07 - Genetica AgrariamicroRNABotanyGeneticsGeneTranscription factorDurum wheatTriticumGeneticsDroughtmicroRNAGene ontologyWater stressfood and beveragesPlant RootGeneral MedicineSettore AGR/02 - Agronomia E Coltivazioni ErbaceeDroughtsPlant LeavesLeafMicroRNAs030104 developmental biologyRootOrgan SpecificityRNA PlantIdentification (biology)Plant LeaveFunctionalintegrative genomics
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