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A Push-Pull Mechanism Helps Design Highly Competent G-Quadruplex-DNA Catalysts

2021

International audience; Massive efforts are currently being invested to improve the performance, versatility, and scope of applications of nucleic acid catalysts. G-quadruplex (G4)/hemin DNAzymes are of particular interest owing to their structural programmability and chemical robustness. However, optimized catalytic efficiency is still bottleneck and the activation mechanism is unclear. Herein, we have designed a series of parallel G4s with different proximal cytosine (dC) derivatives to fine-tune the hemin-binding pocket for G4-DNAzymes. Combining theoretical and experimental methods, we have assessed the dependence of catalytic enhancement on the electronic properties of proximal dCs and…

[SDV.BIO]Life Sciences [q-bio]/BiotechnologyDNAzymeDeoxyribozyme010402 general chemistryG-quadruplex01 natural sciencesCatalysischemistry.chemical_compoundPush–pull mechanismG-quadruplex010405 organic chemistryChemistryMechanism (biology)Robustness (evolution)[CHIM.CATA] Chemical Sciences/CatalysisGeneral Chemistry[CHIM.CATA]Chemical Sciences/CatalysisCombinatorial chemistry0104 chemical sciences[SDV.BIO] Life Sciences [q-bio]/Biotechnology[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry[CHIM.THEO] Chemical Sciences/Theoretical and/or physical chemistryNucleic acidHeminDNAHeminElectron density
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