Search results for "reference"

showing 10 items of 2491 documents

Evolutionary Changes after Translational Challenges Imposed by Horizontal Gene Transfer

2019

International audience; Genes acquired by horizontal gene transfer (HGT) may provide the recipient organism with potentially new functions, but proper expression level and integration of the transferred genes in the novel environment are not granted. Notably, transferred genes can differ from the receiving genome in codon usage preferences, leading to impaired translation and reduced functionality. Here, we characterize the genomic and proteomic changes undergone during experimental evolution of Escherichia coli after HGT of three synonymous versions, presenting very different codon usage preference, of an antibiotic resistance gene. The experimental evolution was conducted with and without…

0106 biological sciencesantibiotic resistanceGene Transfer HorizontalProteome[SDV]Life Sciences [q-bio]Bacterial genome sizeBiology010603 evolutionary biology01 natural sciencesGenomeEvolution Molecular03 medical and health sciences[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Drug Resistance BacterialEscherichia coliGeneticsexperimental evolutionGeneEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health sciencesExperimental evolution[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]compensatory evolutionGenomicsPhenotype[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM][SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriologycodon usage preferencesGenòmicaGenesCodon usage biasHorizontal gene transferProteomehorizontal gene transferResearch ArticleGens
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Macrophytes in boreal streams: Characterizing and predicting native occurrence and abundance to assess human impact

2016

Abstract Macrophytes are a structurally and functionally essential element of stream ecosystems and therefore indispensable in assessment, protection and restoration of streams. Modelling based on continuous environmental gradients offers a potential approach to predict natural variability of communities and thereby improve detection of anthropogenic community change. Using data from minimally disturbed streams, we described natural macrophyte assemblages in pool and riffle habitats separately and in combination, and explored their variation across large scale environmental gradients. Specifically, we developed RIVPACS-type models to predict the presence and abundance of macrophyte taxa at …

0106 biological sciencesbioassessmentRiffleEcologyEcologyNull model010604 marine biology & hydrobiologyagricultural pressureGeneral Decision SciencesSTREAMSpredictive modelsreference condition010603 evolutionary biology01 natural sciencesMacrophyteRIVPACSRIVPACSBorealHabitatwater framework directiveta1181Environmental scienceEcosystemEcology Evolution Behavior and SystematicsEcological Indicators
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An annotated checklist of the leech (Annelida: Hirudinida) species of the Moulouya River basin, Morocco, with several new distribution records and a …

2019

A historical overview of the leech fauna of Morocco, based on both literature data, museum collections and new material, sampled in more than 100 sites in the Moulouya River basin (eastern region of Morocco), is provided. Twenty species from five families and ten genera are currently known, of which Helobdella europea Kutschera, 1987, is a new record for the country and North Africa as a whole. Herein, we add many new distribution records. The current list will need to be revised as new species distributions are recorded in the region. Notes on the species distribution are given along with comments on their habitat preferences. A concise biogeographic analysis outlines the similarities in t…

0106 biological sciencesgeography.geographical_feature_categorybusiness.industryFauna010607 zoologyDrainage basinLeechDistribution (economics)010603 evolutionary biology01 natural sciencesArchaeologyChecklistGeographydistribution habitat preferences Helobdella europea leech fauna new recordAnimal Science and ZoologybusinessAfrican Zoology
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Honeybees prefer novel insect-pollinated flower shapes over bird-pollinated flower shapes

2019

AbstractPlant–pollinator interactions have a fundamental influence on flower evolution. Flower color signals are frequently tuned to the visual capabilities of important pollinators such as either bees or birds, but far less is known about whether flower shape influences the choices of pollinators. We tested European honeybee Apis mellifera preferences using novel achromatic (gray-scale) images of 12 insect-pollinated and 12 bird-pollinated native Australian flowers in Germany; thus, avoiding influences of color, odor, or prior experience. Independent bees were tested with a number of parameterized images specifically designed to assess preferences for size, shape, brightness, or the number…

0106 biological sciencesmedia_common.quotation_subjectInsectBiologybird-pollinated010603 evolutionary biology01 natural sciences[SCCO]Cognitive sciencepollinatorApis mellifera (European honeybee)PollinatorGuest Editor: David Baracchi Dipartimento di Biologia Università degli Studi di Firenze Italy0501 psychology and cognitive sciencesFloral symmetry050102 behavioral science & comparative psychologyinsect-pollinatedangiospermComputingMilieux_MISCELLANEOUSmedia_commonSpecial Column: Behavioural and Cognitive Plasticity in Foraging Pollinators[SCCO.NEUR]Cognitive science/Neuroscience[SDV.BA]Life Sciences [q-bio]/Animal biology05 social sciencesArticlesPreferenceflowerEvolutionary biologyColor preferences[SCCO.PSYC]Cognitive science/PsychologyAnimal Science and Zoology
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Size-assortative pairing in Gammarus pulex (Crustacea: Amphipoda): a test of the prudent choice hypothesis.

2010

6 pages; International audience; Positive assortative mating is a widespread phenomenon in the animal kingdom. Several hypotheses have been proposed to explain this reproductive pattern in natural populations, but growing evidence suggests that assortative mating most often results from sexual mating preferences. Recently, conditiondependent mate choice in the face of costly competition for mates has been proposed to explain assortative mating in natural populations. Variation in competitive ability may generate variation in both the strength and the direction of mate preference, resulting in assortative mating with respect to individual quality if low-quality competitors are less choosy, o…

0106 biological sciencesmedia_common.quotation_subjectPopulationZoology010603 evolutionary biology01 natural sciencesCompetition (biology)Gammarus pulex[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosisprudent choicesexual selection0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyMatingeducationassortative pairingEcology Evolution Behavior and Systematicsmedia_commoneducation.field_of_study[ SDE.BE ] Environmental Sciences/Biodiversity and EcologybiologyEcology05 social sciencesAssortative matingbiology.organism_classificationMating preferencesGammarus pulexMate choiceSexual selectionAnimal Science and Zoology[SDE.BE]Environmental Sciences/Biodiversity and Ecology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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European catfish (Silurus glanis) as a freshwater apex predator drives ecosystem via its diet adaptability

2017

AbstractApex predators play a key role in ecosystem stability across environments but their numbers in general are decreasing. By contrast, European catfish (Silurus glanis), the European freshwater apex predator, is on the increase. However, studies concerning apex predators in freshwaters are scarce in comparison to those in terrestrial and marine ecosystems. The present study combines stomach content and stable isotope analyses with diet preferences of catfish to reveal its impact on the ecosystem since stocking. Catfish niche width is extremely wide in comparison to the typical model predator, Northern pike (Esox lucius). Catfish and pike have different individual dietary specialization…

0106 biological sciencespredatory fishes:Zoology and botany: 480 [VDP]lcsh:MedicineFresh Water01 natural sciencesPredationFood chainBiomasslcsh:ScienceCatfishesApex predatorBiomass (ecology)education.field_of_studyCarbon IsotopesMultidisciplinaryEcologyStomachvesiekosysteemitSilurus glanisAdaptation PhysiologicalSeasonsCatfishanimal structuresFood Chainfood chainsPopulationBiology010603 evolutionary biologyArticleFood PreferencesAnimalsEcosystemMarine ecosystem14. Life underwatereducation:Zoologiske og botaniske fag: 480 [VDP]ravintoketjutEcosystemaquatic ecosystemsNitrogen Isotopes010604 marine biology & hydrobiologylcsh:Rfungiapex predatorDietLakesPredatory BehaviorEsocidaelcsh:QpetokalatmonniScientific Reports
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The Strategic Reference Gene: an organismal theory of inclusive fitness

2019

How to define and use the concept of inclusive fitness is a contentious topic in evolutionary theory. Inclusive fitness can be used to calculate selection on a focal gene, but it is also applied to whole organisms. Individuals are then predicted to appear designed as if to maximise their inclusive fitness, provided that certain conditions are met (formally when interactions between individuals are 'additive'). Here we argue that applying the concept of inclusive fitness to organisms is justified under far broader conditions than previously shown, but only if it is appropriately defined. Specifically, we propose that organisms should maximise the sum of their offspring (including any accrued…

0106 biological sciencesselfish geneHamilton’s ruleEvolutionevoluutioKin selection010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesReference genekausaaliteettiSelection GeneticsukulaisvalintaQuantitative Biology - Populations and Evolutionsocial evolutionEvolutionary theorySelection (genetic algorithm)030304 developmental biologyGeneral Environmental Sciencesopeutuminen0303 health sciencesgeenitModels GeneticGeneral Immunology and MicrobiologyReproductionPopulations and Evolution (q-bio.PE)Inclusive fitnessGeneral MedicineBiological EvolutionCausalityPhenotypeEvolutionary biologyFOS: Biological scienceskausaliteettiGenetic FitnessAdaptationSocial evolutionGeneral Agricultural and Biological SciencesPsychology
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Assortative mating by size without a size-based preference: the female-sooner norm as a mate-guarding criterion.

2013

7 pages; International audience; The study of size-assortative mating, or homogamy, is of great importance in speciation and sexual selection. However, the proximate mechanisms that lead to such patterns are poorly understood. Homogamy is often thought to come from a directional preference for larger mates. However, many constraints affect mating preferences and understanding the causes of size assortment requires a precise evaluation of the pair formation mechanism. Mate-guarding crustaceans are a model group for the study of homogamy. Males guard females until moult and reproduction. They are also unable to hold a female during their own moult and tend to pair with females closer to moult…

0106 biological sciencestime left to moultamplexusBiology010603 evolutionary biology01 natural sciencessize-assortative matingAmplexus[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosis0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyEcology Evolution Behavior and Systematics[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyMate guarding05 social sciencesAssortative matingstate-dependent preferenceDecision ruleMating preferencesmale mate choicePair formationinferential fallacymale-taller normSexual selectionAnimal Science and ZoologyNorm (social)[SDE.BE]Environmental Sciences/Biodiversity and EcologycrustaceanSocial psychology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Out in the open : behavior’s effect on predation risk and thermoregulation by aposematic caterpillars

2020

Abstract Warning coloration should be under strong stabilizing selection but often displays considerable intraspecific variation. Opposing selection on color by predators and temperature is one potential explanation for this seeming paradox. Despite the importance of behavior for both predator avoidance and thermoregulation, its role in mediating selection by predators and temperature on warning coloration has received little attention. Wood tiger moth caterpillars, Arctia plantaginis, have aposematic coloration, an orange patch on the black body. The size of the orange patch varies considerably: individuals with larger patches are safer from predators, but having a small patch is beneficia…

0106 biological sciencesvaroitusväriZoologyAposematismBiology010603 evolutionary biology01 natural scienceseläinten käyttäytyminenIntraspecific competitiontäpläsiilikäsPredation03 medical and health sciencesParus majoraposematismStabilizing selectionCaterpillarArctia plantaginisPredatorEcology Evolution Behavior and Systematicslämmönsäätely030304 developmental biologyParus0303 health sciencesthermoregulationAcademicSubjects/SCI01330Original Articlestalitiainen15. Life on landThermoregulationbiology.organism_classificationmicrohabitat preferencesaalistuscolorAnimal Science and Zoology
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Low-Power, Subthreshold Reference Circuits for the Space Environment : Evaluated with -rays, X-rays, Protons and Heavy Ions

2019

The radiation tolerance of subthreshold reference circuits for space microelectronics is presented. The assessment is supported by measured results of total ionization dose and single event transient radiation-induced effects under &gamma

02 engineering and technologyHardware_PERFORMANCEANDRELIABILITYgammasäteily7. Clean energy01 natural sciencesanalog single-event transient (ASET)Ionizationsingle-event effects (SEE)0202 electrical engineering electronic engineering information engineeringAnnan elektroteknik och elektronikElectronic circuitPhysicsprotonsSubthreshold conductionionisoiva säteilyröntgensäteilyGamma raygamma-raysHardware and ArchitectureAtomic physicsVoltage referencemikroelektroniikkaprotonitComputer Networks and Communicationslcsh:TK7800-8360voltage referenceIonheavy-ions0103 physical sciencesionizationradiation hardening by design (RHBD)X-raysHardware_INTEGRATEDCIRCUITSMicroelectronicsElectrical and Electronic Engineeringhiukkassäteilybandgap voltage reference (BGR)Other Electrical Engineering Electronic Engineering Information Engineering010308 nuclear & particles physicsbusiness.industry020208 electrical & electronic engineeringlcsh:Electronicsspace electronicstotal ionization dose (TID)Analog single-event transient (ASET); Bandgap voltage reference (BGR); CMOS analog integrated circuits; Gamma-rays; Heavy-ions; Ionization; Protons; Radiation hardening by design (RHBD); Reference circuits; Single-event effects (SEE); Space electronics; Total ionization dose (TID); Voltage reference; X-raysmikropiiritsäteilyfysiikkaControl and Systems Engineeringreference circuitsSignal ProcessingbusinessSpace environmentHardware_LOGICDESIGNCMOS analog integrated circuits
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