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showing 10 items of 5637 documents

Advancing Through the Pandemic From the Perspective of Marine Graduate Researchers: Challenges, Solutions, and Opportunities

2020

The ongoing COVID-19 pandemic has brought about a new social and academic reality to researchers worldwide. The field of marine science, our own topic of interest, has also been impacted in multiple ways, from cancelation of laboratory and field activities to postponement of onboard research. As graduate researchers, we have a time-sensitive academic path, and our current situation may constrain our academic future. At the same time, the pandemic demands revised strategies to deal with the ongoing difficulties and tackle similar future situations. In this perspective, we have gathered information on the challenges, solutions and opportunities for graduate researchers in the field of marine …

0106 biological sciences2019-20 coronavirus outbreaklcsh:QH1-199.5010504 meteorology & atmospheric sciencesCoronavirus disease 2019 (COVID-19)Ocean Engineeringlcsh:General. Including nature conservation geographical distributionAquatic ScienceOceanography01 natural sciencesopportunitiescareerPolitical sciencePandemicSocial mediaearly career researcherslcsh:Sciencecoronavirus pandemic0105 earth and related environmental sciencesWater Science and TechnologyAcademic careerGlobal and Planetary Change010604 marine biology & hydrobiologyField (Bourdieu)PostponementPerspective (graphical)VDP::Matematikk og Naturvitenskap: 400marine science and technologylcsh:QEngineering ethicsFrontiers in Marine Science
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Potential use of machine learning methods in assessment of Fusarium culmorum and Fusariumproliferatum growth and mycotoxin production in treatments w…

2021

Abstract The use of Fusarium-controlling fungicides is necessary to limit crop loss. Little is known about the effect of commercial antifungal formulations at sub-lethal doses, and their interaction with abiotic factors, on Fusarium culmorum and F. proliferatum development and on zearalenone and fumonisin biosynthesis, respectively. In the present study different treatments based on sulfur, trifloxystrobin and demethylation inhibitor fungicides (cyproconazole, tebuconazole and prothioconazole) under different environmental conditions, in Maize Extract Medium (MEM), are assayed in vitro. Then, several machine learning methods (neural networks, random forest and extreme gradient boosted trees…

0106 biological sciencesAntifungal AgentsWater activityBiologyMachine learningcomputer.software_genre01 natural sciencesFumonisinsZea maysMachine Learning03 medical and health scienceschemistry.chemical_compoundFusariumFumonisinGeneticsFusarium culmorumMycotoxinZearalenoneEcology Evolution Behavior and Systematics030304 developmental biologyTebuconazoleAbiotic component0303 health sciencesbusiness.industryfood and beveragesbiology.organism_classificationFungicideInfectious DiseaseschemistryArtificial intelligencebusinesscomputer010606 plant biology & botanyFungal biology
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The effects of parasite age and intensity on variability in acanthocephalan-induced behavioural manipulation.

2008

10 pages; International audience; Numerous parasites with complex life cycles are able to manipulate the behaviour of their intermediate host in a way that increases their trophic transmission to the definitive host. Pomphorhynchus laevis, an acanthocephalan parasite, is known to reverse the phototactic behaviour of its amphipod intermediate host, Gammarus pulex, leading to an increased predation by fish hosts. However, levels of behavioural manipulation exhibited by naturally-infected gammarids are extremely variable, with some individuals being strongly manipulated whilst others are almost not affected by infection. To investigate parasite age and parasite intensity as potential sources o…

0106 biological sciencesBehavior ControlMale[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyAgingAcanthocephalansHelminthiasisZoology010603 evolutionary biology01 natural sciences030308 mycology & parasitologyPredationAcanthocephalaHost-Parasite InteractionsBehavioural manipulation03 medical and health sciencesFish DiseasesPhotophobia[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hostingAnimals[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyAmphipodaTrophic level0303 health sciencesLife Cycle StagesbiologyHost (biology)Intermediate hostFishesbiology.organism_classificationGammaridsGammarus pulexInfectious DiseasesExperimental infectionsImmunologyParasitologyPomphorhynchus laevisFemaleAcanthocephala[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisInternational journal for parasitology
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Eye fluke-induced cataracts in natural fish populations: is there potential for host manipulation?

2010

SUMMARYManipulation of host phenotype (e.g. behaviour, appearance) is suggested to be a common strategy to enhance transmission in trophically transmitted parasites. However, in many systems, evidence of manipulation comes exclusively from laboratory studies and its occurrence in natural host populations is poorly understood. Here, we examined the potential for host manipulation by Diplostomum eye flukes indirectly by quantifying the physiological effects of parasites on fish. Earlier laboratory studies have shown that Diplostomum infection predisposes fish to predation by birds (definitive hosts of the parasites) by reducing fish vision through cataract formation. However, occurrence of ca…

0106 biological sciencesBehavior Controlgenetic structuresOceans and SeasGasterosteusEye010603 evolutionary biology01 natural sciencesCataractHost-Parasite Interactions03 medical and health sciencesLeuciscusFish DiseasesfoodCoregonus lavaretusDiplostomum; Parasite-host interactions; Parasite transmission; Predation; TrematodaVision in fishesAnimalsGymnocephalus030304 developmental biology0303 health sciencesbiologyfood.dishRaptorsEcologyta1184Fishesbiology.organism_classificationeye diseases3. Good healthObligate parasiteInfectious DiseasesPredatory Behaviorta1181Animal Science and ZoologyParasitologyTrematodaRutilusTrematodaParasitology
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Pleurotus opuntiae revisited e An insight to the phylogeny of dimitic Pleurotus species with emphasis on the P. djamor complex

2018

Abstract The name Pleurotus opuntiae is indiscriminately used for describing mushrooms with white to off-white to white-grey pilei with short or absent stipe and dimitic hyphal system, which grow on plants of the genera Opuntia, Yucca, Agave, Phytolacca etc. However, the outcome of the present study evidences that this name should be reserved for specimens deriving from the Mediterranean area only; an epitype originating from Italy on Opuntia ficus-indica is designated. Pertinent material was sequenced by using the internal transcribed spacer region (ITS) and found to be phylogenetically related to P. djamor from Kenya and Nigeria, while members of the P. djamor complex from other continent…

0106 biological sciencesContext (language use)Pleurotus01 natural sciences03 medical and health sciencesStipe (botany)BotanyDNA Ribosomal SpacerRNA Ribosomal 28SGeneticsCluster AnalysisInternal transcribed spacerDNA FungalRibosomal DNAEcology Evolution Behavior and SystematicsPhylogeny030304 developmental biology0303 health sciencesPleurotusbiologyMediterranean RegionSettore BIO/02 - Botanica SistematicaSequence Analysis DNAPlantsbiology.organism_classificationAgaveInfectious DiseasesTaxonGenetic distanceItalySettore BIO/03 - Botanica Ambientale E ApplicataRNA Polymerase IIFungal taxonomy ITS Multi-gene phylogeny Opuntia ficus-indica Oyster mushroom Pleurotus opuntiae epitype010606 plant biology & botany
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Genetic and phenotypic variation of the malaria vector Anopheles atroparvus in southern Europe

2011

Abstract Background There is a growing concern that global climate change will affect the potential for pathogen transmission by insect species that are vectors of human diseases. One of these species is the former European malaria vector, Anopheles atroparvus. Levels of population differentiation of An. atroparvus from southern Europe were characterized as a first attempt to elucidate patterns of population structure of this former malaria vector. Results are discussed in light of a hypothetical situation of re-establishment of malaria transmission. Methods Genetic and phenotypic variation was analysed in nine mosquito samples collected from five European countries, using eight microsatell…

0106 biological sciencesEntomologylcsh:Arctic medicine. Tropical medicinelcsh:RC955-962PopulationBiology010603 evolutionary biology01 natural sciencesGene flowlcsh:Infectious and parasitic diseases03 medical and health sciencesSDG 3 - Good Health and Well-beingAnophelesGenetic variationGeneticsSDG 13 - Climate ActionAnimalsWings Animallcsh:RC109-216educationEcology Evolution Behavior and Systematics030304 developmental biologySDG 15 - Life on LandMorphometrics0303 health scienceseducation.field_of_studyGenetic diversity[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]GeographyResearchAnophelesGenetic Variationbiology.organism_classification3. Good healthEurope[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsInfectious DiseasesEvolutionary biologyInsect ScienceMicrosatelliteParasitologyMicrosatellite RepeatsMalaria Journal
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An optimised multi-host trematode life cycle: fishery discards enhance trophic parasite transmission to scavenging birds

2016

Overlapping distributions of hosts and parasites are critical for successful completion of multi-host parasite life cycles and even small environmental changes can impact on the parasite's presence in a host or habitat. The generalist Cardiocephaloides longicollis was used as a model for multi-host trematode life cycles in marine habitats. This parasite was studied to quantify parasite dispersion and transmission dynamics, effects of biological changes and anthropogenic impacts on life cycle completion. We compiled the largest host dataset to date, by analysing 3351 molluscs (24 species), 2108 fish (25 species) and 154 birds (17 species) and analysed the resultant data based on a number of …

0106 biological sciencesFood ChainFish farmingSnailsFishingFisheriesTrematode InfectionsBiologyDNA Ribosomal010603 evolutionary biology01 natural sciencesHost SpecificityBirdsFish DiseasesAquacultureRNA Ribosomal 28SMediterranean SeaAnimalsBody SizeHuman ActivitiesCardiocephaloides longicollisEcosystemTrophic levelLife Cycle StagesBird Diseasesbusiness.industryEcology010604 marine biology & hydrobiologyFishesMarine habitatsIntermediate hostSequence Analysis DNADiscardsFisheryInfectious DiseasesBlack SeaMolluscaParasitologyTrematodabusinessInternational Journal for Parasitology
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Host manipulation in the face of environmental changes: Ecological consequences

2015

Several parasite species, particularly those having complex life-cycles, are known to induce phenotypic alterations in their hosts. Most often, such alterations appear to increase the fitness of the parasites at the expense of that of their hosts, a phenomenon known as “host manipulation”. Host manipulation can have important consequences, ranging from host population dynamics to ecosystem engineering. So far, the importance of environmental changes for host manipulation has received little attention. However, because manipulative parasites are embedded in complex systems, with many interacting components, changes in the environment are likely to affect those systems in various ways. Here, …

0106 biological sciencesFuture studiesPopulationBiologyEnvironment010603 evolutionary biology01 natural sciencesSpecial section: Impact of Environmental changes on Infectious Diseases (IECID)Ecosystems03 medical and health scienceslcsh:Zoology[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisEcosystemlcsh:QL1-991educationHost–parasite interactions030304 developmental biologyTrophic level0303 health scienceseducation.field_of_study[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyEcologyHost (biology)Host manipulationInfectious DiseasesAnimal Science and ZoologyParasitology[SDE.BE]Environmental Sciences/Biodiversity and EcologyGlobal changes[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisInternational Journal for Parasitology: Parasites and Wildlife
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III. Biochemistry of S-layers

1997

During evolution prokaryotes have developed different envelope structures exterior to the cell wall proper. Among these surface components are regularly arranged S-layers and capsules. The structural characterization and the detailed chemical analysis of these surface molecules is a prerequisite to understand their biosynthesis and functional role(s) at the molecular level. Of particular interest are the glycosylated S-layer proteins which belong to the first prokaryotic glycoproteins ever described. Their characterization was performed on strains belonging to the thermophilic Bacillaceae and included structural studies and experiments to learn about the pathways for the glycan biosynthesis…

0106 biological sciencesGlycansurface cellulairecapsuleElectrospray ionization[SDV]Life Sciences [q-bio]macromoléculeMass spectrometry01 natural sciencesMicrobiologystructure moléculaire03 medical and health sciencesspectrométrie de masse010608 biotechnologyComputingMilieux_MISCELLANEOUS030304 developmental biologyglycoprotéinechemistry.chemical_classification0303 health sciencesmicroorganismebiologyPolyglutamate030306 microbiologyChemistrypolyglutamatebiology.organism_classificationInfectious DiseasesNatronococcusBiochemistrybiology.proteinCell envelopeGlycoproteinS-layer
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Root fungal endophytes: identity, phylogeny and roles in plant tolerance to metal stress.

2021

International audience; Metal trace elements accumulate in soils mainly because of anthropic activities, leading living organisms to develop strategies to handle metal toxicity. Plants often associate with root endophytic fungi, including nonmycorrhizal fungi, and some of these organisms are associated with metal tolerance. The lack of synthetic analyses of plant-endophyte-metal tripartite systems and the scant consideration for taxonomy led to this review aiming (1) to inventory non-mycorrhizal root fungal endophytes described with respect to their taxonomic diversity and (2) to determine the mutualistic roles of these plant-fungus associations under metal stress. More than 1500 species in…

0106 biological sciencesHypocrealesMetal toxicity[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy01 natural sciencesPlant RootsPlant use of endophytic fungi in defense03 medical and health sciencesAscomycotaPhylogeneticsBotanyGeneticsEndophytesPleosporalesSymbiosisEcology Evolution Behavior and SystematicsPhylogeny030304 developmental biology0303 health sciencesbiologyFungi15. Life on landPlantsbiology.organism_classificationInfectious Diseases[SDE]Environmental SciencesTaxonomy (biology)Metallic trace element Fungal endophytes Taxonomy Accumulation Mutualism Plant-fungi interactions010606 plant biology & botanyFungal biology
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