Search results for "sorting"

showing 10 items of 187 documents

Extracellular vesicles from parasitic helminths contain specific excretory/secretory proteins and are internalized in intestinal host cells.

2012

The study of host-parasite interactions has increased considerably in the last decades, with many studies focusing on the identification of parasite molecules (i.e. surface or excretory/secretory proteins (ESP)) as potential targets for new specific treatments and/or diagnostic tools. In parallel, in the last few years there have been significant advances in the field of extracellular vesicles research. Among these vesicles, exosomes of endocytic origin, with a characteristic size ranging from 30-100 nm, carry several atypical secreted proteins in different organisms, including parasitic protozoa. Here, we present experimental evidence for the existence of exosome-like vesicles in parasitic…

ProteomicsFascioliasisScienceEndocytic cycleHelminth InfectionSoil-Transmitted HelminthsExosomesBiochemistryMicrobiologyHost-Parasite InteractionsCell Line TumorEchinostomaMolecular Cell BiologyParasitic DiseasesAnimalsHumansSecretionIntestinal MucosaBiologyEchinostomiasisMultidisciplinarybiologyVesicleQRParasite PhysiologyProteinsHelminth ProteinsImmunogold labellingFasciola hepaticabiology.organism_classificationMicrovesiclesRatsCell biologyHost-Pathogen InteractionInfectious DiseasesSecretory proteinSmall MoleculesExcretory systemMedicineProtozoaParasitologyMembranes and SortingZoologyResearch ArticleHelminthologyNeglected Tropical Diseases
researchProduct

Mineralogical and chemical variability of fluvial sediments 2. Suspended-load silt (Ganga–Brahmaputra, Bangladesh)

2011

Sediments carried in suspension represent a fundamental part of fluvial transport. Nonetheless, largely because of technical problems, they have been hitherto widely neglected in provenance studies. In order to determine with maximum possible precision the mineralogy of suspended load collected in vertical profiles from water surface to channel bottom of Rivers Ganga and Brahmaputra, we combined Raman spectroscopy with traditional heavy-mineral and X-ray diffraction analyses, carried out separately on low-density and dense fractions of all significant size classes in each sample (multiple-window approach). Suspended load resulted to be a ternary mixture of dominant silt enriched in phyllosi…

REE geochemistryProvenanceSuspension sortingsilt mineralogy settling equivalence suspension sorting Raman spectroscopy REE geochemistry weathering indicesSedimentFluvialMineralogySiltSettore GEO/08 - Geochimica E VulcanologiaSettling equivalenceGeophysicsSpace and Planetary ScienceGeochemistry and PetrologyWeathering indicesRaman spectroscopySilt mineralogyEarth and Planetary Sciences (miscellaneous)ErosionGEO/02 - GEOLOGIA STRATIGRAFICA E SEDIMENTOLOGICASedimentary rockSuspended loadSediment transportGeology
researchProduct

Clathrin-independent entry of baculovirus triggers uptake of E. coli in non-phagocytic human cells

2008

The prototype baculovirus, Autographa californica multiple nucleopolyhedrovirus, an insect pathogen, holds great potential as a gene therapy vector. To develop transductional targeting and gene delivery by baculovirus, we focused on characterizing the nature and regulation of its uptake in human cancer cells. Baculovirus entered the cells along fluid-phase markers from the raft areas into smooth-surfaced vesicles devoid of clathrin. Notably, regulators associated with macropinocytosis, namely EIPA, Pak1, Rab34, and Rac1, had no significant effect on viral transduction, and the virus did not induce fluid-phase uptake. The internalization and nuclear uptake was, however, affected by mutants o…

RHOASciencevirusesmedia_common.quotation_subjecteducationGene deliveryClathrinCell LineMembrane Lipids03 medical and health sciencesPhagocytosisCell Biology/Membranes and SortingViral entryVirologyEscherichia coliBiochemistry/Cell Signaling and Trafficking StructuresHumansInternalization030304 developmental biologymedia_commonAdenosine Triphosphatases0303 health sciencesMultidisciplinaryBase SequencebiologyADP-Ribosylation FactorsQ030302 biochemistry & molecular biologyHEK 293 cellsRTransfectionMolecular biologyClathrinEndocytosisNucleopolyhedroviruses3. Good healthCell biologyvirologiaADP-Ribosylation Factor 6Cell culturebiology.proteinMedicineRNA InterferenceResearch Article
researchProduct

Analyzing assessors and products in sorting tasks: DISTATIS, theory and applications

2007

Abstract In this paper we present a new method called distatis that can be applied to the analysis of sorting data. D istatis is a generalization of classical multidimensional scaling which allows one to analyze 3-ways distance tables. When used for analyzing sorting tasks, distatis takes into account individual sorting data. Specifically, when distatis is used to analyze the results of an experiment in which several assessors sort a set of products, we obtain two types of maps: One for the assessors and one for the products. In these maps, the proximity between two points reflects their similarity, and therefore these maps can be read using the same rules as standard metric multidimensiona…

RV coefficientNutrition and DieteticsSimilarity (geometry)GeneralizationSortingcomputer.software_genreSet (abstract data type)Metric (mathematics)sortData miningMultidimensional scalingAlgorithmcomputerFood ScienceMathematicsFood Quality and Preference
researchProduct

In vivo Trafficking and Localization of p24 Proteins in Plant Cells

2008

p24 proteins constitute a family of putative cargo receptors that traffic in the early secretory pathway. p24 proteins can be divided into four subfamilies (p23, p24, p25 and p26) by sequence homology. In contrast to mammals and yeast, most plant p24 proteins contain in their cytosolic C-terminus both a dilysine motif in the -3, -4 position and a diaromatic motif in the -7, -8 position. We have previously shown that the cytosolic tail of Arabidopsis p24 proteins has the ability to interact with ARF1 and coatomer (through the dilysine motif) and with COPII subunits (through the diaromatic motif). Here, we establish the localization and trafficking properties of an Arabidopsis thaliana p24 pr…

Recombinant Fusion ProteinsMolecular Sequence DataArabidopsisGolgi ApparatusVacuoleProtein Sorting SignalsBiologyEndoplasmic ReticulumBiochemistrysymbols.namesakeStructural BiologyArabidopsisGeneticsAnimalsHumansProtein IsoformsAmino Acid SequenceMolecular BiologyCOPIISecretory pathwayArabidopsis ProteinsLysineEndoplasmic reticulumMembrane ProteinsCell BiologyCOPIGolgi apparatusbiology.organism_classificationActinsCell biologyDNA-Binding ProteinsProtein TransportBiochemistryCoatomerVacuolessymbolsCOP-Coated VesiclesCarrier ProteinsTranscription FactorsTraffic
researchProduct

The ubiquitin-specific protease USP8 is critical for the development and homeostasis of T cells

2015

The modification of proteins by ubiquitin has a major role in cells of the immune system and is counteracted by various deubiquitinating enzymes (DUBs) with poorly defined functions. Here we identified the ubiquitin-specific protease USP8 as a regulatory component of the T cell antigen receptor (TCR) signalosome that interacted with the adaptor Gads and the regulatory molecule 14-3-3β. Caspase-dependent processing of USP8 occurred after stimulation of the TCR. T cell-specific deletion of USP8 in mice revealed that USP8 was essential for thymocyte maturation and upregulation of the gene encoding the cytokine receptor IL-7Rα mediated by the transcription factor Foxo1. Mice with T cell-specifi…

Regulatory T cellT-LymphocytesImmunologyReceptors Antigen T-Cell610 Medicine & healthBiologyCD8-Positive T-LymphocytesJurkat cellsJurkat CellsMiceddc:570EndopeptidasesmedicineImmunology and AllergyAnimalsHomeostasisHumans10239 Institute of Laboratory Animal ScienceIL-2 receptorAdaptor Proteins Signal Transducing2403 ImmunologyReceptors Interleukin-7ThymocytesEndosomal Sorting Complexes Required for TransportForkhead Box Protein O1ZAP70T-cell receptorCD28Cell DifferentiationForkhead Transcription FactorsColitisCell biologyThymocytemedicine.anatomical_structure2723 Immunology and Allergy570 Life sciences; biology590 Animals (Zoology)Ubiquitin ThiolesteraseCD8
researchProduct

Lentiviral transduction of face and limb flaps: implications for immunomodulation of vascularized composite allografts.

2012

Background Ex vivo introduction of an immunomodulatory transgene into a face or hand allograft may improve the risk-to-benefit ratio of vascularized composite allografts. Abrogation of the immunogenicity of the skin component of a face or hand allograft may decrease alloreactivity and permit the induction of immunologic tolerance. Proof-of-principle demonstrations of transduction of composite tissue have been established using adenoviral vectors, producing transient gene expression. The authors hypothesized that transduction, integration, and long-term expression of transgenes in a vascularized composite allograft could be achieved using lentiviral vectors. Methods Ex vivo transduction of h…

Reporter genePathologymedicine.medical_specialtybusiness.industryTransgeneLentivirusGene Transfer TechniquesExtremitiesTransfectionCell sortingSurgical FlapsViral vectorRatsImmunomodulationTransduction (genetics)Transduction GeneticFaceCancer researchMedicineAnimalsHumansSurgeryIntradermal injectionbusinessEx vivoPlastic and reconstructive surgery
researchProduct

Schematic or taxonomic organisation of the reality and the development of class logic

1994

Abstract The experiment studied the effect of various methods of organising reality (taxonomic vs. schematic) on success in inclusion and logical complementation tasks. Seventy-two nine-year-old children were divided into four groups on the basis of their logical structuring abilities. Using three sets of material (Animals, Plants, Means of Transportation), the subjects performed a sorting task and an evaluation task in which the taxonomic and schematic modes of organising reality were opposed. Contrary to our hypothesis, the ″;logical included' did not exhibit a greater capacity for taxonomic organisation than the “empirical includers” of the same age, either in the sorting or the evaluati…

RestructuringSortingSchematicGeneral MedicineStructuringTask (project management)Mode (music)Arts and Humanities (miscellaneous)Class logicPsychologySocial psychologyCategorical variableGeneral PsychologyCognitive psychologyInternational Journal of Psychology
researchProduct

Identification and purification of human erythroid progenitor cells by monoclonal antibody to the transferrin receptor (T� 67)

1988

Anti-TU 67 is a murine monoclonal antibody that recognizes the transferrin receptor. With respect to hematopoietic cells TU 67 is expressed by human multipotent colony-forming cells (CFU-Mix), erythroid progenitor cells (BFU-E and CFU-E) and a fraction of granulocyte/monocyte colony forming cells, but is not expressed by mature hematopoietic cells including erythrocytes, platelets, lymphocytes, and peripheral blood myeloid cells. The TU 67-positive fraction of normal bone marrow, separated by fluorescence-activated cell sorting (FACS) or immune rosettes, contained 87% of the erythroid progenitor cells. Erythroid progenitor cells were enriched up to 50-fold by using a combination of monoclon…

Rosette FormationErythroblastsmedicine.drug_classMonocyteAntibodies MonoclonalFluorescent Antibody TechniqueTransferrin receptorCell SeparationHematologyGeneral MedicineCell sortingBiologyFlow CytometryMonoclonal antibodyMolecular biologyHaematopoiesismedicine.anatomical_structurehemic and lymphatic diseasesReceptors TransferrinMonoclonalmedicinebiology.proteinAntibodyInterleukin 3Blut
researchProduct

Bezier curves approximation of triangularized surfaces using SVG

2006

This paper presents a technique to convert surfaces, obtained through a Data Dependent Triangulation, in Bezier Curves by using a Scalable Vector Graphics File format. The method starts from a Data Dependent Triangulation, traces a map of the boundaries present into the triangulation, using the characteristics of the triangles, then the estimated barycenters are connected, and a final conversion of the resulting polylines in curves is performed. After the curves have been estimated and closed the final representation is obtained by sorting the surfaces in a decreasing order. The proposed techniques have been compared with other raster to vector conversions in terms of perceptual quality.

SVG Triangulation Bezier curvesScalable Vector GraphicsSortingTriangulation (social science)Image processingBézier curvecomputer.file_formatComputer Science::Computational GeometryFile formatVisualizationComputer graphics (images)Representation (mathematics)computerComputingMethodologies_COMPUTERGRAPHICSMathematicsSPIE Proceedings
researchProduct