Search results for "structural"

showing 10 items of 5047 documents

Evidence for specific, high-affinity binding sites for a proteinaceous elicitor in tobacco plasma membrane

1995

Abstract Binding of cryptogein, a proteinaceous elicitor, was studied on tobacco plasma membrane. The binding of the [125I]cryptogein was saturable, reversible and specific with an apparent Kd of 2 nM. A single class of cryptogein binding sites was found with a sharp optimum pH for binding at about pH 7.0. The high-affinity correlates with cryptogein concentrations required for biological activity in vivo.

0106 biological sciencesNicotiana tabacumBiophysics[SDV.BC]Life Sciences [q-bio]/Cellular Biology01 natural sciencesBiochemistryFungal Proteins03 medical and health sciencesStructural BiologyIn vivoTobaccoGeneticsBinding siteReceptor[SDV.BC] Life Sciences [q-bio]/Cellular BiologyMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesBinding SitesbiologyNicotiana tabacumChemistryAlgal ProteinsCell MembraneElicitinBiological activityCell BiologyElicitorbiology.organism_classification3. Good healthElicitorKineticsPlants ToxicMembraneBiochemistryCryptogeinPlasma membraneReceptor010606 plant biology & botany
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Proposed Environmental Risk Management Elements in a Carpathian Valley Basin, within the Roşia Montană European Historical Mining Area

2021

Non-ferrous metals mining activities have long accompanied people, and began in the study area of South East Europe over 2000 years ago. The environment quality is significantly affected by both historic mining activities and contemporary impacts. All these problems, inducing synergic negative effects on local organism communities, have created a chronic state of pollution. The Corna Valley has one of the oldest historical human impacts in Romania due to the influence of mining. Fish and benthic macroinvertebrates have exhibited significant responses to long term mining effects on lotic systems. The analysis of macroinvertebrate communities, correlated with the lack of fish and some biotope…

0106 biological sciencesPollutionBiotopehuman impactlentic and lotic ecosystemsRiver ecosystemHealth Toxicology and Mutagenesismedia_common.quotation_subject010501 environmental sciencesStructural basinrisk management01 natural sciencesArticleRiversAnimalsHumansRisk management0105 earth and related environmental sciencesmedia_commonInvertebratefishhuman impact; lentic and lotic ecosystems; aquatic macroinvertebrates; fish; threats; risk management; Corna BasinCorna BasinthreatsMontanaRomaniabusiness.industry010604 marine biology & hydrobiologyEnvironmental resource managementRPublic Health Environmental and Occupational HealthInvertebratesaquatic macroinvertebratesEuropeGeographyBenthic zoneMedicineFish <Actinopterygii>businessWater Pollutants ChemicalEnvironmental MonitoringInternational Journal of Environmental Research and Public Health
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Amount, composition, and spatial distribution of floating macro litter along fixed trans-border transects in the Mediterranean basin

2018

Marine litter is a major source of pollution in the Mediterranean basin, but despite legislative requirements, scant information is available for the ongoing assessment of this threat. Using higher size classes as proxy for litter distribution, this study gave a synoptic estimation of the amount, composition, and distribution of floating macro-litter in the Mediterranean. The average amount of macro-litter was in a range of 2-5 items/km2, with the highest in the Adriatic basin. Seasonal patterns were present in almost all study areas and were significant in the Ligurian Sea, Sardinian-Balearic basin, and Central Tyrrhenian Sea. Plastic accounted for &gt; 80% of litter in all areas and seaso…

0106 biological sciencesPollutionMediterranean climateSettore BIO/07 - Ecologiamedia_common.quotation_subject010501 environmental sciencesAquatic ScienceStructural basinOceanographySpatial distribution01 natural sciencesMediterranean BasinMarine debrisMediterranean SeaTransect0105 earth and related environmental sciencesmedia_commonWaste ProductsSpatial AnalysisMediterranean RegionMarine litter Mediterranean Plastic Pollution010604 marine biology & hydrobiologyPollutionOceanographyGeographic Information SystemsEnvironmental scienceSeasonsPlasticsWater Pollutants ChemicalEnvironmental Monitoring
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Testing hypotheses in evolutionary ecology with imperfect detection: capture-recapture structural equation modeling.

2012

8 pages; International audience; Studying evolutionary mechanisms in natural populations often requires testing multifactorial scenarios of causality involving direct and indirect relationships among individual and environmental variables. It is also essential to account for the imperfect detection of individuals to provide unbiased demographic parameter estimates. To cope with these issues, we developed a new approach combining structural equation models with capture-recapture models (CR-SEM) that allows the investigation of competing hypotheses about individual and environmental variability observed in demographic parameters. We employ Markov chain Monte Carlo sampling in a Bayesian frame…

0106 biological sciencesPopulation Dynamicsselection gradient analysesBiologystate-space models010603 evolutionary biology01 natural sciencesModels BiologicalStructural equation modelingMark and recapture010104 statistics & probabilitystructural equation modelslife history tradeoffsAnimalsPasseriformes0101 mathematicsSet (psychology)Ecology Evolution Behavior and SystematicsSelection (genetic algorithm)Ecosystemcapture-recapture models[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyEcologyModel selectionCyanistesindividual heterogeneitybiology.organism_classificationCausalityBiological Evolutionevolutionary ecologyEvolutionary ecology[SDE.BE]Environmental Sciences/Biodiversity and EcologyEcology
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Reticulon-like proteins in Arabidopsis thaliana: structural organization and ER localization

2007

International audience; Reticulons are proteins that have been found predominantly associated with the endoplasmic reticulum in yeast and mammalian cells. While their functions are still poorly understood, recent findings suggest that they participate in the shaping of the tubular endoplamic reticulum (ER). Although reticulon-like proteins have been identified in plants, very little is known about their cellular localization and functions. Here, we characterized the reticulon-like protein family of Arabidopsis thaliana. Three subfamilies can be distinguished on the basis of structural organization and sequence homology. We investigated the subcellular localization of two members of the larg…

0106 biological sciencesProtein familyMolecular Sequence DataBiophysicsArabidopsis[SDV.BC]Life Sciences [q-bio]/Cellular BiologyRTLNB01 natural sciencesBiochemistryPlant Epidermis03 medical and health sciencesProtein structureStructural BiologyArabidopsisGeneticsArabidopsis thalianaAmino Acid SequenceMolecular BiologyCellular localizationConserved SequencePhylogeny030304 developmental biology0303 health sciencesbiologySequence Homology Amino AcidArabidopsis ProteinsEndoplasmic reticulumENDOPLASMIC RETICULUMCHLOROPLASTARABIDOPSIS THALIANACell BiologySubcellular localizationbiology.organism_classificationRETICULONBiochemistryReticulonRETICULON-LIKE PROTEIN BSequence Alignment010606 plant biology & botany
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Ecological effects of aquaculture on living and non-living suspended fractions of the water column: a meta-analysis.

2006

The effects of aquaculture on the ecology of the water column have been extensively studied in the last two decades. However, to date, it has not been possible to extrapolate homogeneous information from the peer-reviewed literature. In the present study, 68 peer-reviewed articles were analysed and about 1087 study cases were used to test whether worldwide cultivations of aquatic organisms (shrimps, fish, bivalves and polyculture) have a differential effect on living and non-living fractions of the water column (suspended matter, chlorophyll-a, particulate organic carbon, nitrogen and phosphorus, bacteria and plankton). Meta-analysis feasibility depends on obtaining an estimate of the effec…

0106 biological sciencesSettore BIO/07 - EcologiaChlorophyllEnvironmental EngineeringWater columnNitrogenAquaculture010501 environmental sciencesBiologyParticulate Living and non-living fractionEnvironmentAquaculture impact01 natural sciencesWater columnBiopolymersAquaculturePhytoplanktonAnimalsMeta-analysi14. Life underwaterPolycultureWaste Management and Disposal0105 earth and related environmental sciencesWater Science and TechnologyCivil and Structural EngineeringBacteriaEcologybusiness.industryEcology010604 marine biology & hydrobiologyEcological ModelingChlorophyll ABivalvePhosphorusParticulatesPlanktonPollutionCarbonShrimpShrimpFishPolyculturePhytoplanktonOrganic aquaculturebusinessWater MicrobiologyWater research
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Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium

2010

Abstract Background Synechocystis sp. PCC6803 is a cyanobacterium considered as a candidate photo-biological production platform - an attractive cell factory capable of using CO2 and light as carbon and energy source, respectively. In order to enable efficient use of metabolic potential of Synechocystis sp. PCC6803, it is of importance to develop tools for uncovering stoichiometric and regulatory principles in the Synechocystis metabolic network. Results We report the most comprehensive metabolic model of Synechocystis sp. PCC6803 available, iSyn669, which includes 882 reactions, associated with 669 genes, and 790 metabolites. The model includes a detailed biomass equation which encompasses…

0106 biological sciencesSystems biologyIn silicoMetabolic networkComputational biologyBiologyModels Biological01 natural sciencesMetabolic engineeringGene Knockout Techniques03 medical and health sciencesStructural BiologyModelling and Simulation010608 biotechnologyBotanyBiomassPhotosynthesislcsh:QH301-705.5Molecular Biology030304 developmental biologyAutotrophic Processes0303 health sciencesGene Expression ProfilingApplied MathematicsSynechocystisSynechocystisGenomicsDarknessbiology.organism_classificationComputer Science ApplicationsFlux balance analysislcsh:Biology (General)Genes BacterialAutotrophic ProcessesModeling and SimulationEnergy sourceGenome BacterialResearch ArticleBMC Systems Biology
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Morphology of spermatheca in Scutelleridae (Hemiptera: Pentatomoidea) and its taxonomic significance

2016

AbstractStructures of spermatheca in 63 species of Scutelleridae (Hemiptera) representing 46 genera and all subfamilies currently recognised in the family were examined and compared. The morphology of three main parts of the spermatheca (receptacle, intermediate part, and spermathecal duct) was described and three main types of spermatheca in Scutelleridae were identified. The taxonomic importance of spermathecal features for the higher classification of scutellerids is discussed.

0106 biological sciencesbiologyPentatomoideaPhysiology010607 zoologyZoologyScutelleridaebiology.organism_classification010603 evolutionary biology01 natural sciencesHemipteramedicine.anatomical_structureSpermathecaStructural BiologyInsect ScienceReceptaclemedicineMolecular BiologyDuct (anatomy)Ecology Evolution Behavior and SystematicsCanadian Entomologist
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Sediments as Factor in the Fate of the Threatened Endemic Fish Species Romanichthys Valsanicola Dumitrescu, Bănărescu and Stoica, 1957 (Vâlsan River …

2020

Abstract The main emphasis of this paper is on the negative effects of sedimentation on the most highly endangered fish of Europe Romanichthys valsanicola and the habitats of its main trophic resource Rhithrogena semicolorata. Some inexpensive and easy-to-implement solutions are identified and proposed (dam reservoir related recommendations for basin sediments management, forestry related recommendations for sediment basin management, basin sediments general management recommendations, riverbed ecological reconstruction approach proposal, etc.) in the paper with the same conservative purpose for Romanichthys valsanicola species in the actual situation of habitat loss and drastic regress of …

0106 biological sciencesfishgeographygeography.geographical_feature_categorybiologyEcology010604 marine biology & hydrobiologyDrainage basinFish speciesRomanichthys010501 environmental sciencesStructural basinaquatic habitatsbiology.organism_classificationsediments management01 natural sciencesFisheryverge of extinctionThreatened speciesQH540-549.50105 earth and related environmental sciencesTransylvanian Review of Systematical and Ecological Research
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Iridescent structurally based coloration of eyespots correlates with mating success in the peacock.

2007

Gaudy plumage coloration is a widespread ornamental trait in birds and thought to be sexually selected. Although much attention has been devoted to structural coloration reflecting in UV, the signaling function of structural colors lacking UV reflectance and those that exhibit iridescence coloration are poorly documented. The train of the peacock (Pavo cristatus), a classical example of a sexually selected trait, is composed of iridescent structurally colored eyespots not reflecting in UV. Until today, the role played by the structural color of the eyespots in female mate choice has never been investigated using spectrometry. We measured eyespot coloration from a stationary angle (static co…

0106 biological sciencesfood.ingredientZoologyBiologyavian vision010603 evolutionary biology01 natural sciences03 medical and health sciencesfood[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisCrab spidersmultiple traitsEcology Evolution Behavior and Systematics030304 developmental biologyHuephysiological model0303 health sciencesEcology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]intersexual selectionIridescence[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]PlumageSexual selectionFeathervisual_artvisual_art.visual_art_mediumEyespotAnimal Science and ZoologyStructural coloration[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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