Search results for "structures"

showing 10 items of 4815 documents

Characterization and phylogenetic analysis of a cDNA encoding the Fes/FER related, non-receptor protein-tyrosine kinase in the marine sponge Sycon ra…

1998

Abstract In search of ancient versions of phylogenetically conserved genes/proteins, which are typical for multicellular animals, we have decided to analyse marine sponges (Porifera), the most ancient and most primitive metazoan organisms. We report here the complete nucleotide sequence of Sycon raphanus cDNA coding for a 879 aa long protein (100 kDa), which displays high overall similarity in primary structure and organization of domains with non-receptor tyrosine kinases (TKs) from the Fes/FER family. The encoded protein, which we named Fes/FER_SR, has a highly conserved, 260 aa long tyrosine kinase domain at the C-terminus. Amino-terminal to the catalytic domain is an 85 aa long SH2 doma…

DNA Complementaryanimal structuresMolecular Sequence DataBiologySH2 domainHomology (biology)PhylogeneticsProto-Oncogene ProteinsComplementary DNAGeneticsAnimalsAmino Acid SequenceSycon raphanusPhylogenyGeneticsSequence Homology Amino AcidProtein primary structureNucleic acid sequenceSequence Analysis DNAGeneral MedicineProtein-Tyrosine Kinasesbiology.organism_classificationPoriferaBiochemistryOncogenes; Signal transduction; SH2 domain; Metazoa; Porifera; PhylogenySequence AlignmentTyrosine kinaseGene
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The Mutation without childrenrgl Causes Ecdysteroid Deficiency in Third-Instar Larvae of Drosophila melanogaster

2000

Larvae homozygous for the recessive lethal allele without children(rgl) (woc(rgl)) fail to pupariate. Application of exogenous 20-hydroxyecdysone elicits puparium formation and pupation. Ecdysteroid titer measurements on mutant larvae show an endocrine deficiency in the brain-ring gland complex, which normally synthesizes ecdysone, resulting in a failure of the larvae to achieve a threshold whole body hormone titer necessary for molting. Ultrastructural investigation revealed extensive degeneration of the prothoracic cells of the ring gland in older larvae. The woc gene, located in polytene chromosomal region 97F, consists of 11 exons. A 6.8-kb transcript is expressed throughout development…

DNA Complementaryanimal structuresMolecular Sequence DataMutantwithout childrenmental retardation03 medical and health scienceschemistry.chemical_compoundExon0302 clinical medicineAnimalsDrosophila ProteinsHumansAmino Acid SequenceecdysoneMolecular BiologyAlleles030304 developmental biology0303 health sciencesEcdysteroidPolytene chromosomeBase Sequencezinc fingerbiologyHomozygotefungiEcdysteroidsCell Biologybiology.organism_classificationMolecular biology3. Good healthDNA-Binding ProteinsMicroscopy ElectronDrosophila melanogasterPhenotypechemistryMutagenesisLarvaring glandChromosomal regionInsect ProteinsSteroidsDrosophila melanogaster030217 neurology & neurosurgeryDrosophila ProteinEcdysoneTranscription FactorsDevelopmental BiologyDevelopmental Biology
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Src proteins/src genes: from sponges to mammals

2004

The genome of marine sponge Suberites domuncula, a member of the most ancient and most simple metazoan phylum Porifera, encodes at least five genes for Src-type proteins, more than, i.e., Caenorhabditis elegans or Drosophila melanogaster (two in each). Three proteins, SRC1SD, SRC2SD and SRC3SD, were fully characterized. The overall homology (identity+similarity) among the three S. domuncula Srcs (68-71%) is much lower than the sequence conservation between orthologous Src proteins from freshwater sponges (82-85%). It is therefore very likely that several src genes/proteins were already present in the genome of Urmetazoa, the hypothetical metazoan ancestor. We have identified in the S. domun…

DNA Complementaryanimal structuresMolecular Sequence DataProto-Oncogene Proteins pp60(c-src)SH2 domainHomology (biology)SH3 domainEvolution Molecularsrc Homology DomainsExonGeneticsAnimalsProtein IsoformsAmino Acid SequenceCloning MolecularGenePhylogenyMammalsGeneticsSequence Homology Amino AcidbiologyIntronDNASequence Analysis DNAGeneral Medicinebiology.organism_classificationIntronsPoriferaSuberites domunculaSequence AlignmentProto-oncogene tyrosine-protein kinase SrcGene
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Cloning and Sequencing of a cDNA Encoding a Larval-Pupal-Specific Cuticular Protein in Tenebrio Molitor (Insecta, Coleoptera). Developmental Expressi…

1996

A cDNA clone encoding a larval-pupal cuticular protein, named TMLPCP-22, has been isolated by screening a library in expression vector with a monoclonal antibody made against pupal cuticular proteins of Tenebrio molitor. Northern-blot and in situ hybridization analyses showed that the expression of TMLPCP-22 is regulated in a stage-specific and tissue-specific manner; the transcript was present during the secretion of preecdysial larval and pupal cuticles and was restricted to epidermal cells. No expression was observed during adult cuticle deposition. In supernumerary pupae obtained after application of a juvenile hormone analogue, which is known to inhibit the adult programme, TMLPCP-22 m…

DNA Complementaryanimal structuresmedia_common.quotation_subjectCuticleMolecular Sequence DataGenes InsectIn situ hybridizationBiologyBiochemistryComplementary DNAGene expressionAnimalsAmino Acid SequenceRNA MessengerCloning MolecularMetamorphosisTenebrioIn Situ HybridizationDNA Primersmedia_commonCloningExpression vectorBase SequenceSequence Homology Amino AcidfungiMetamorphosis BiologicalPupaGene Expression Regulation DevelopmentalProteinsMolecular biologyJuvenile HormonesLarvaJuvenile hormoneEuropean Journal of Biochemistry
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Divergent Distribution in Vascular and Avascular Mammalian Retinae Links Neuroglobin to Cellular Respiration

2005

The visual function of the vertebrate retina relies on sufficient supply with oxygen. Neuroglobin is a respiratory protein thought to play an essential role in oxygen homeostasis of neuronal cells. For further understanding of its function, we compared the distribution of neuroglobin and mitochondria in both vascular and avascular mammalian retinae. In the vascular retinae of mouse and rat, oxygen is supplied by the outer choroidal, deep retinal, and inner capillaries. We show that in this type of retina, mitochondria are concentrated in the inner segments of photoreceptor cells, the outer and the inner plexiform layers, and the ganglion cell layer. These are the same regions in which oxyge…

DNA Complementarygenetic structuresGuinea PigsMolecular Sequence DataRespiratory chainNeuroglobinNerve Tissue ProteinsMitochondrionBiologyBiochemistryRetinaMicechemistry.chemical_compoundOxygen ConsumptionOxygen homeostasismedicineAnimalsPhotoreceptor CellsTissue DistributionAmino Acid SequenceCloning MolecularMolecular BiologyGanglion cell layerMice Inbred BALB CRetinaChoroidAntibodies MonoclonalCytochromes cRetinal VesselsRetinalCell BiologyAnatomyImmunohistochemistryeye diseasesCapillariesGlobinsMitochondriaRatsCell biologyRespiratory proteinmedicine.anatomical_structurechemistryNeuroglobinsense organsSequence AlignmentJournal of Biological Chemistry
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Manipulating mtDNA in vivo reprograms metabolism via novel response mechanisms.

2019

Mitochondria have been increasingly recognized as a central regulatory nexus for multiple metabolic pathways, in addition to ATP production via oxidative phosphorylation (OXPHOS). Here we show that inducing mitochondrial DNA (mtDNA) stress in Drosophila using a mitochondrially-targeted Type I restriction endonuclease (mtEcoBI) results in unexpected metabolic reprogramming in adult flies, distinct from effects on OXPHOS. Carbohydrate utilization was repressed, with catabolism shifted towards lipid oxidation, accompanied by elevated serine synthesis. Cleavage and translocation, the two modes of mtEcoBI action, repressed carbohydrate rmetabolism via two different mechanisms. DNA cleavage activ…

DYNAMICSLife CyclesSTRESSMITOCHONDRIAL-DNAADN mitocondrialQH426-470BiochemistryOxidative PhosphorylationLarvaeAdenosine TriphosphateTRANSCRIPTIONPost-Translational ModificationEnergy-Producing OrganellesProtein MetabolismOrganic CompoundsDrosophila MelanogasterChemical ReactionsMETHYLATIONEukaryotaAcetylationAnimal ModelsDNA Restriction EnzymesKetonesCellular ReprogrammingMitochondrial DNAMitochondriaTRANSLOCATIONNucleic acidsInsectsChemistryDROSOPHILAExperimental Organism SystemsPhysical SciencesSURVIVALCarbohydrate MetabolismCellular Structures and OrganellesMetabolic Networks and PathwaysResearch ArticlePyruvateArthropodaForms of DNAeducationCarbohydratesBioenergeticsResearch and Analysis MethodsDNA MitochondrialBiokemia solu- ja molekyylibiologia - Biochemistry cell and molecular biologyModel OrganismsGenetiikka kehitysbiologia fysiologia - Genetics developmental biology physiologyGeneticsAnimalsHumansBiology and life sciencesOrganic ChemistryOrganismsChemical CompoundsProteinsDNACell BiologyInvertebratesDELETIONSOxidative StressMetabolismMAINTENANCEDiabetes Mellitus Type 2Animal Studies1182 Biochemistry cell and molecular biologyAcidsDevelopmental BiologyPLoS Genetics
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Nonintrusive monitoring and quantitative analysis of strong laser-field-induced impulsive alignment

2004

We report the observation of impulsive alignment of $\mathrm{C}{\mathrm{O}}_{2}$ molecules produced through their interaction with a nonresonant, strong laser pulse. The periodic alignment is monitored using a polarization technique generally employed in optical Kerr effect experiments; the birefringence produced by alignment of the molecular sample is measured with a weak pulse, time-delayed with respect to the alignment pulse. The technique provides a signal proportional to $⟨{\mathrm{cos}}^{2}\phantom{\rule{0.2em}{0ex}}\ensuremath{\theta}⟩\ensuremath{-}\frac{1}{3}$, where $\ensuremath{\theta}$ is the polar angle between the molecular axis and the strong-field polarization axis. Experimen…

DYNAMICSPhysicsI-2BirefringenceKerr effectWave packetWAVE-PACKETSALIGNING MOLECULESPOLARIZABILITYPolarization (waves)Electromagnetic radiationAtomic and Molecular Physics and OpticsPULSESSchrödinger equationMOLECULAR ALIGNMENTMOLECULESsymbols.namesakeREVIVAL STRUCTURESPolarizabilityIonizationQuantum mechanicssymbolsAtomic physicsPhysical Review A
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FRIPON: a worldwide network to track incoming meteoroids

2020

Context. Until recently, camera networks designed for monitoring fireballs worldwide were not fully automated, implying that in case of a meteorite fall, the recovery campaign was rarely immediate. This was an important limiting factor as the most fragile - hence precious - meteorites must be recovered rapidly to avoid their alteration. Aims. The Fireball Recovery and InterPlanetary Observation Network (FRIPON) scientific project was designed to overcome this limitation. This network comprises a fully automated camera and radio network deployed over a significant fraction of western Europe and a small fraction of Canada. As of today, it consists of 150 cameras and 25 European radio receiver…

DYNAMICS[INFO.INFO-AR]Computer Science [cs]/Hardware Architecture [cs.AR]MeteorsComputer scienceRadio receiver[INFO.INFO-DM]Computer Science [cs]/Discrete Mathematics [cs.DM]Surveys010502 geochemistry & geophysicsTrack (rail transport)01 natural sciencesMeteorites meteors meteoroidslaw.inventionPlanets and planetary system[INFO.INFO-TS]Computer Science [cs]/Signal and Image ProcessingMethods: observationallaw[INFO.INFO-RB]Computer Science [cs]/Robotics [cs.RO]meteoroids010303 astronomy & astrophysicsComputingMilieux_MISCELLANEOUSObservational methodsEarth and Planetary Astrophysics (astro-ph.EP)meteoroids -surveys -methods: observational -interplanetary medium[SDU.ASTR]Sciences of the Universe [physics]/Astrophysics [astro-ph]ORIGIN[INFO.INFO-AO]Computer Science [cs]/Computer Arithmeticmeteorites meteors meteoroids – surveys – methods: observational – interplanetary mediumMeteoroidsRECOVERYORBITMeteoriteFully automatedInterplanetary medium; Meteorites meteors meteoroids; Methods: observational; Surveys[INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV][INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]Astrophysics - Instrumentation and Methods for Astrophysics[SPI.SIGNAL]Engineering Sciences [physics]/Signal and Image processingFLUXReal-time computingfripon[INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS]FOS: Physical sciencesContext (language use)CAMERA[INFO.INFO-SE]Computer Science [cs]/Software Engineering [cs.SE][SPI.AUTO]Engineering Sciences [physics]/Automatic[SDU.STU.PL]Sciences of the Universe [physics]/Earth Sciences/Planetology0103 physical sciencesFIREBALL NETWORKobservational [Methods]meteorsInstrumentation and Methods for Astrophysics (astro-ph.IM)0105 earth and related environmental sciencesMeteoroidINNISFREE METEORITE[INFO.INFO-CV]Computer Science [cs]/Computer Vision and Pattern Recognition [cs.CV]Astronomy and AstrophysicsMETEORITE FALLMeteorites meteors meteoroidCamera networkSpace and Planetary Science[SDU]Sciences of the Universe [physics]Interplanetary spaceflightmeteroids trackingmeteoroids - surveys - methods: observationalSYSTEMInterplanetary mediumAstrophysics - Earth and Planetary AstrophysicsMeteorites
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Telerehabilitation for COPD Patients across Sectors: Using Technology to Promote Cooperation among Healthcare Professionals

2011

A telerehabilitation programme for patients with chronic obstructive pulmonary lung disease has been developed. Aim: The aim of the paper is to explore how telerehabilitation technology influences cooperation and coordination between healthcare professionals in the Telekat network. Theory: Network theory has been applied. Methods: A triangulation of data collection techniques such as documentary materials, participant observations (n=163 hours), and qualitative interviews (n=24) has been used in a case study of the Telekat project. Findings: Telerehabilitation technologies influences cooperation and coordination between healthcare professionals in themes like: interdisciplinary decision mak…

Data collectiongenetic structuresHealth professionalsbusiness.industryCopd patientsQualitative interviewseducationNursingLung diseaseTelerehabilitationFacilitatorMedicinebusinessMutual learning
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Reverse-Safe Text Indexing

2021

We introduce the notion of reverse-safe data structures. These are data structures that prevent the reconstruction of the data they encode (i.e., they cannot be easily reversed). A data structure D is called z - reverse-safe when there exist at least z datasets with the same set of answers as the ones stored by D . The main challenge is to ensure that D stores as many answers to useful queries as possible, is constructed efficiently, and has size close to the size of the original dataset it encodes. Given a text of length n and an integer z , we propose an algorithm that constructs a z -reverse-safe data structure ( z -RSDS) that has size O(n) and answers decision and counting pattern matc…

Data structuresComputer scienceSuffix treesuffix tree0102 computer and information sciences02 engineering and technologytext indexing01 natural sciencesTheoretical Computer Sciencelaw.inventionSet (abstract data type)law020204 information systems0202 electrical engineering electronic engineering information engineeringPattern matchingdata privacySettore INF/01 - InformaticaSearch engine indexingdata privacy; Data structures; pattern matching; suffix tree; text indexingData structureMatrix multiplicationpattern matching010201 computation theory & mathematicsData structureAlgorithmAdversary modelInteger (computer science)ACM Journal of Experimental Algorithmics
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