Search results for "substitut"

showing 10 items of 1337 documents

An ab initio softness metric to measure the similarity between all pairs of amino acids

2010

Abstract The search for quantitative index of similarity between molecular moeties is important for its applications in pharmacology. Similarity is also an important concept in computational biology to measure the exchangeability of an amino acid by another in a protein sequence. In the present work, a distance between two molecules based on local and global softnesses of their fragments is defined. The method proposed is general and could be applied to any molecular library. It is first applied to compute the distance between the 190 pairs of different amino acids in their neutral states. Two amino acids belonging to the one of the biochemical class (aliphatic, sulfur-containing, acidic, ……

chemistry.chemical_classificationSequenceChemistryPhysicsAb initioBLOSUMCondensed Matter PhysicsBiochemistryMeasure (mathematics)Substitution matrixAmino acidChemistrySimilarity (network science)Computational chemistryMetric (mathematics)Physical and Theoretical ChemistryJournal of Molecular Structure: THEOCHEM
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O-Alkylation of a lignite humic acid by phase-transfer catalysis

2006

A mild phase-transfer catalytic reaction has been conducted to O-alkylate the acidic functions of a lignite humic acid (HA), using tetrabutylammonium hydroxide as the phase-transfer catalyst. The HA acidic functional groups were made to react, in tetrahydrofuran, by nucleophilic substitution with several alkyl halides-methyl iodide, and ethyl, propyl, and butyl, and benzyl bromide. The occurrence of the O-alkylation reaction was assessed by elemental analysis and 1H NMR, CPMAS 13C NMR, and FTIR spectroscopy. Bonding of alkyl groups increased the carbon and hydrogen content and the H/C ratios of all the humic reaction products. Increased nitrogen in the reaction products suggested incomplete…

chemistry.chemical_classificationSettore AGR/13 - Chimica AgrariaEtherAlkylationCarbon-13 NMRBiochemistryAnalytical ChemistryCatalysischemistry.chemical_compoundchemistryProton NMRNucleophilic substitutionHumic acidOrganic chemistrylipids (amino acids peptides and proteins)Humic substances O-Alkylation Phase-transfer catalysis Tetrabutylammonium hydroxide NMR FTIRAlkylAnalytical and Bioanalytical Chemistry
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Diastereoselective formation of highly functionalised α-substituted amino acid derivatives via aldol addition

2005

Abstract Highly diastereoselective aldol additions of (2 R ,4 S )-3- tert -butyl 4-methyl 2- tert -butyloxazolidine-3,4-dicarboxylate ( 1 ) are reported. The utility of the highly substituted oxazolidines of type 1 for diastereoselective α-addition of the fully protected amino acid l -serine with achiral and chiral carbonyl compounds is demonstrated and the relative and absolute configuration of the aldol products are discussed on the basis of NOESY data and solid state structures of selected examples. The aldol products represent highly useful intermediates in the syntheses of sphingosine-related metabolites.

chemistry.chemical_classificationStereochemistryOrganic ChemistryAbsolute configurationSolid-stateAnalytical ChemistryAmino acidInorganic ChemistrySerineAldol reactionchemistrySubstituted Amino AcidTwo-dimensional nuclear magnetic resonance spectroscopySpectroscopyJournal of Molecular Structure
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Conjugated Oligomers with Terminal Donor–Acceptor Substitution

2005

Conjugated oligomers represent a prominent class of compounds from a viewpoint of their theory, synthesis, and applications in materials science. Push-pull substitution with an electron donor D at one end of the conjugation and an electron acceptor A at the other end results in them having outstanding optical and electronical properties. This Review highlights fundamental synthetic strategies for the preparation of such oligomers with n repeat units (n=1, 2, 3, 4, ..) and the rules that govern their linear and nonlinear optical properties (absorption, frequency doubling and tripling). The unification of chemical, physical, and theoretical aspects with an interdisciplinary image of this clas…

chemistry.chemical_classificationStereochemistrySubstitution (logic)Nonlinear opticsElectron donorGeneral MedicineGeneral ChemistryConjugated systemElectron acceptorCombinatorial chemistryCatalysisNonlinear opticalchemistry.chemical_compoundchemistryTerminal (electronics)Absorption (chemistry)Donor acceptorAngewandte Chemie International Edition
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Dual application of (aqua)(chlorido)(porphyrinato)chromium(III) as hypersensitive amine-triggered ON switch and for dioxygen activation.

2014

Although synthesis and substitution reactions of chlorido chromium(III) porphyrins Cr(III)(TPP)(Cl)(L) (H2TPP = 5,10,15,20-tetraphenyl porphyrin, L = pyridine, H2O, ROH, etc.), have been well-established in coordination chemistry for decades, an unexpected dichotomous reactivity of Cr(III)(TPP)(Cl)(H2O) (1) toward amines is disclosed here. This reactivity leads to the application of 1 as highly sensitive substoichiometric and irreversible ON switch for amine detection by an autocatalytic pathway. The concomitant activation of O2 by the 1/amine system is furthermore exploited in an electrochemically driven epoxidation of norbonene using O2 as initial oxidant.

chemistry.chemical_classificationSubstitution reactionChemistrychemistry.chemical_elementPhotochemistryMedicinal chemistryPorphyrinCoordination complexInorganic ChemistryAutocatalysischemistry.chemical_compoundChromiumPyridineAmine gas treatingReactivity (chemistry)Physical and Theoretical ChemistryInorganic chemistry
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Pentachloro(pyrazine)rhenate(iv) complex as precursor of heterobimetallic pyrazine-containing ReIV2MII (M = Ni, Cu) species: synthesis, crystal struc…

2008

Three novel Re(IV) mononuclear complexes of formulae NBu4[ReC15(pyz)] (1), NH2Me2[ReCl5(pyz)] (2) and NH4[ReCl5(pyz)].0.75H2O (3), (pyz being pyrazine; NBu4+ = tetra-n-butylammonium cation, NH2Me2+ = dimethylammonium cation and NH4+ = ammonium cation), were synthesized by ligand substitution reaction from [ReCl6]2- anion and pyrazine in N,N-dimethylformamide (DMF). In addition, two new heterobimetallic compounds, the salt namely [ReCl5(pyz)]2[Ni(cyclam)](4) (cyclam = 1,4,8,11-tetraazacyclotetradecane) and the heterotrinuclear [{ReCl5(mu-pyz)}2Cu(DMF)4] (5) complex, were prepared by using as precursor 1 and 3, respectively. Compounds 1-5 were characterized by single-crystal X-ray diffraction…

chemistry.chemical_classificationSubstitution reactionPyrazineLigandMetal ions in aqueous solutionInorganic chemistrySalt (chemistry)Crystal structureInorganic Chemistrychemistry.chemical_compoundCrystallographychemistryCyclamAntiferromagnetismDalton Transactions
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Synthesis of 1,3- and 2,3-Diglycosylated Indoles as Potential Trisaccharide Mimetics

2012

Diglycosylated heteroaromatics may serve as metabolically stable mimetics of trisaccharides. Herein, the preparation of several 1,3- and 2,3-diglycosylindoles by direct C-glycosylation of monoglycosylated precursors is described.

chemistry.chemical_classificationchemistry.chemical_compoundGlycosylationChemistryStereochemistryOrganic ChemistryGlycosideOrganic chemistryTrisaccharideElectrophilic aromatic substitutionCatalysisSynthesis
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H-NMR and FT-IR study of the state of melatonin confined in membrane models: location and interactions of melatonin in water free lecithin and AOT re…

2004

The state of melatonin confined either in dry lecithin or bis(2-ethylhexyl) sulfosuccinate sodium salt (AOT) reversed micelles has been investigated by H-NMR and FT-IR spectroscopies as a function of the melatonin to surfactant molar ratio (R). The analysis of experimental results leads to hypothesize that, independently of R and the surfactant nature and as a consequence of anisotropic melatonin/surfactant interactions, melatonin is totally solubilized in reversed micelles and mainly located by opportune orientation in the nanodomain constituted by the surfactant head groups. The absence of significant spectral changes related to the protons linked to the first carbon atoms of surfactant a…

chemistry.chemical_classificationendocrine systemfood.ingredientOrganic ChemistryPhotochemistryMicelleLecithinlcsh:QD241-441MelatoninfoodMembranelcsh:Organic chemistrychemistryPulmonary surfactantmedicineProton NMRFourier transform infrared spectroscopyhormones hormone substitutes and hormone antagonistsAlkylmedicine.drugArkivoc
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Sex Differences in Mitochondrial Antioxidant Gene Expression

2020

Females live longer than males. This could be in part due to the higher levels of estrogens in females, which protect them against aging. Physiological concentrations of estrogens have antioxidant effects as they induce the expression of manganese superoxide dismutase and glutathione peroxidase by stimulating estrogen receptors and the mitogen-activated protein kinase and nuclear factor kappa B pathways. However, estrogens can have undesirable effects such as they are feminizing to males, so other alternatives need to be searched. Phytoestrogens are good candidates as they can also bind to estrogens receptors, and in fact, they are able to mimic the antioxidant properties of estrogens. It i…

chemistry.chemical_classificationmedicine.medical_specialtyAntioxidantmedicine.medical_treatmentGlutathione peroxidaseEstrogen receptorBiologyManganese Superoxide Dismutasechemistry.chemical_compoundEndocrinologychemistryInternal medicineGene expressionmedicinePhytoestrogensProtein kinase AReceptorhormones hormone substitutes and hormone antagonists
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ChemInform Abstract: Enantioselective Allylic Substitution Using a Novel (Phosphino-α-D-glucopyrano-oxazoline)palladium Catalyst.

2010

chemistry.chemical_compoundAllylic rearrangementchemistrySubstitution (logic)Enantioselective synthesisOrganic chemistryGeneral MedicineOxazolinePalladium catalystChemInform
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