Search results for "systematic"

showing 10 items of 7608 documents

The skeletal proteome of the coral Acropora millepora: the evolution of calcification by co-option and domain shuffling.

2013

14 pages; International audience; In corals, biocalcification is a major function that may be drastically affected by ocean acidification (OA). Scleractinian corals grow by building up aragonitic exoskeletons that provide support and protection for soft tissues. Although this process has been extensively studied, the molecular basis of biocalcification is poorly understood. Notably lacking is a comprehensive catalog of the skeleton-occluded proteins-the skeletal organic matrix proteins (SOMPs) that are thought to regulate the mineral deposition. Using a combination of proteomics and transcriptomics, we report the first survey of such proteins in the staghorn coral Acropora millepora. The or…

0106 biological sciencesProteomeCoralMolecular Sequence Datacalcium carbonate skeletonProteomics010603 evolutionary biology01 natural sciencesMass SpectrometryCalcium CarbonateEvolution Molecular03 medical and health sciencesAcropora milleporaCalcification PhysiologicproteomicsPhylogeneticsAnthozoa[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]evolutionGeneticsAnimals14. Life underwaterAmino Acid Sequencescleractinian[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMolecular BiologyEcology Evolution Behavior and SystematicsDiscoveriesPhylogeny030304 developmental biologyStaghorn coral0303 health sciencesbiologySequence Homology Amino AcidEcologyMolecular Sequence Annotationbiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsAnthozoabiomineralizationExtracellular MatrixProtein Structure TertiaryEvolutionary biology[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomeSequence AlignmentFunction (biology)
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Next-generation biological control

2020

Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Nex…

0106 biological sciencesProteomicsH10 Pests of plantsInternationalityComputer science[SDV]Life Sciences [q-bio]Laboratory of VirologySequence assemblybiological controlmicrobiome01 natural sciencesGenome editinggeneticsNagoya ProtocolLaboratory of EntomologyCYTOPLASMIC INCOMPATIBILITY2. Zero hunger0303 health sciencesQUANTITATIVE TRAIT LOCICommercefood and beveragesCONTROL AGENTSPE&RCBiosystematiekNASONIA-VITRIPENNISGUT CONTENT-ANALYSIS[SDE]Environmental SciencesTraitinsect breedingAXYRIDIS COLEOPTERA-COCCINELLIDAEOriginal ArticleLaboratory of GeneticsLIFE-HISTORY TRAITSGeneral Agricultural and Biological SciencesGenomicsContext (language use)Computational biology[SDV.BID]Life Sciences [q-bio]/Biodiversityartificial selectionQuantitative trait locusAnimal Breeding and GenomicsLaboratorium voor Erfelijkheidsleer010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyLaboratorium voor Virologiemodelling03 medical and health sciencesgenomics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyFokkerij en GenomicaPARASITOID WASPSelection (genetic algorithm)modelling.030304 developmental biologySEX DETERMINATIONOriginal ArticlesLaboratorium voor EntomologieWIASgenome assemblyBiosystematicsEPSartificial selection biological control genetics genome assembly genomics insect breeding microbiome modellingBiological Reviews
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Plant-phenotypic changes induced by parasitoid ichnoviruses enhance the performance of both unparasitized and parasitized caterpillars

2021

Early Access; International audience; There is increasing awareness that interactions between plants and insects can be mediated by microbial symbionts. Nonetheless, evidence showing that symbionts associated with organisms beyond the second trophic level affect plant-insect interactions are restricted to a few cases belonging to parasitoid-associated bracoviruses. Insect parasitoids harbor a wide array of symbionts which, like bracoviruses, can be injected into their herbivorous hosts to manipulate their physiology and behavior. Yet, the function of these symbionts in plant-based trophic webs remains largely overlooked. Here we provide the first evidence of a parasitoid-associated symbiont…

0106 biological sciencesProteomics[SDV]Life Sciences [q-bio]Waspsplant-mediated species interactionsInsect01 natural sciencesParasitoidLaboratory of Entomologymedia_commonTrophic levelparasitoid-associated symbiont2. Zero hunger[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesparasitoid‐associated symbiontsbiologyfood and beveragesPE&RChost-parasitoid interaction[SDV] Life Sciences [q-bio][SDV.EE] Life Sciences [q-bio]/Ecology environmentLarvapolydnaviruseOriginal Articleplant‐mediated species interactionsBracovirusfood.ingredientmedia_common.quotation_subjectZoologyContext (language use)Ecological Interactions010603 evolutionary biologyplant-herbivore-microbe interactionsHost-Parasite Interactions03 medical and health sciencesfoodplant-herbivore-microbe interactionGeneticsAnimalsHerbivoryCaterpillarplant‐herbivore‐microbe interactionsEcology Evolution Behavior and Systematics030304 developmental biologyHerbivorefungiOriginal Articlesbiology.organism_classificationLaboratorium voor EntomologiepolydnavirusesPolydnaviridaeparasitoid-associated symbiontsIchnovirusEPShost‐parasitoid interactionplant-mediated species interaction
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Towards understanding isotope variability in elephant ivory to establish isotopic profiling and source-area determination

2016

Abstract We present here new isotopic data (δ 13 C, δ 15 N, δ 18 O, δ 2 H, and δ 34 S) from pulverised ivory powder, measured by continuous flow isotope ratio mass spectrometry from an unprecedented large dataset of 507 ivory samples, derived from twenty-eight African and six Asian elephant range states. The aim of this study is to assess the accuracy of isotopic fingerprinting and to evaluate its forensic potential and limitations to predict the provenance of ivory of unknown origin. We constructed a nominal assignment framework for the African reference samples, consisting of 208 different sites and applied the weighted k -Nearest Neighbor Classifier with reference site as classifier and …

0106 biological sciencesProvenance010504 meteorology & atmospheric sciencesbiologyEcologyStable isotope ratioIvoryNiche differentiationGeneralist and specialist species010603 evolutionary biology01 natural sciencesAfrican elephantGeographyAsian elephantvisual_artbiology.animalvisual_art.visual_art_mediumIsotope-ratio mass spectrometryEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesNature and Landscape ConservationBiological Conservation
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Taxonomic and Phylogenetic Investigations on Psoralea Acaulis (Psoraleeae: Fabaceae) With the Description of A New Genus Kartalinia

2018

Salmeri, Cristina/0000-0002-5261-590X WOS: 000454161300003 Psoralea acaulis Hoffm. is a very peculiar and taxonomically isolated species of the tribe Psoraleeae, occurring in the Caucasian territories. Currently, this tribe contains 10 distinct genera, well differentiated morphologically. Due to some morphological similarities, P. acaulis was attributed to Bituminaria Heist ex Fabr., a genus with a Mediterranean-Macaronesian distribution. However, as it has many characters, some of which are autapomorphic, it was assigned its own subgenus: Christevenia Barneby ex C. H. Stirt. In light of detailed cladistic and phylogenetic analyses, this arrangement is taxonomically questionable and rather …

0106 biological sciencesPsoraleeaeChorologyKartaliniafodder graPlant Sciencetaxonomy.phylogeny010603 evolutionary biology01 natural sciencesBituminariakaryologytaxonomyGenusBotanyPsoraleeaeNomenclaturefodder grassEcology Evolution Behavior and SystematicsColchis regionbiologySettore BIO/02 - Botanica SistematicaBituminaria; Colchis region; endemic flora; fodder grass; Kartalinia; karyology; nomenclature; phylogeny; Psoraleeae; taxonomy.endemic florabiology.organism_classificationEcology Evolution Behavior and SystematicBituminariaCladisticsTaxonomy (biology)nomenclatureSubgenus010606 plant biology & botany
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Taxonomic investigations on Psoralea palaestina (Fabaceae), a critical species of Mediterranean flora

2016

Psoralea palaestina is a critical and unappreciated species described from Palestinian territories, and currently treated as synonym of P. bituminosa, nowadays known as Bituminaria bituminosa. Nomenclatural investigations allowed to ascertain that it was validly described for the first time by Bassi (1768) and not by Gouan (1773), as previously thought. Extensive taxonomic investigations revealed that this very peculiar legume is morphologically well differentiated from the other allied known species. Therefore, it has to be properly treated at specific level and transferred to the genus Bituminaria, thus proposing a new combination: Bituminaria palaestina. Based on literature, herbarium an…

0106 biological sciencesPsoraleeaeChorologyPlant Science010603 evolutionary biology01 natural sciencesBituminariaMiddle EastBituminaria; Endemic flora; Fodder grass; Middle East; Nomenclature; Psoraleeae; TaxonomyBituminaria endemic flora fodder grass Middle East nomenclature Psoraleeae taxonomy0502 economics and businessBotanyPsoraleeaeEudicotsEcology Evolution Behavior and SystematicsTaxonomybiologyNomenclatureSettore BIO/02 - Botanica SistematicaFodder grass05 social sciencesEndemic floraFabaceaebiology.organism_classificationBituminariaHerbariumBituminaria bituminosaTaxonomy (biology)050203 business & managementPhytotaxa
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Asymmetrical interspecific communication of predatory threat in mixed-species colonies of lesser kestrels (Falco naumanni) and jackdaws (Corvus moned…

2019

Sympatric species derive benefits by attending to information conveyed by heterospecifics. Our previous finding of reduced vigilance among jackdaws and lesser kestrels residing in mixed-species colonies suggested a reliance on interspecific communication of information regarding predatory threats. To test for interspecific communication of threat, we first determined whether jackdaw and lesser kestrel call structure varied with perceived threat. In this call production phase of our study, free-living birds in mixed-species colonies were presented with models representing a potential nest predator (European magpie) or with non-threatening stimuli (wood pigeon or wooden dowel) in proximity to…

0106 biological sciencesPublic informationalarm communicationgroup living05 social scienceseavesdroppingSettore BIO/05 - ZoologiaZoologyFalco naumanniresponse urgencyInterspecific competitionpublic&nbspGroup livingBiologybiology.organism_classification010603 evolutionary biology01 natural sciencesinformationMixed speciesinterspecific association0501 psychology and cognitive sciencesAnimal Science and Zoology050102 behavioral science & comparative psychologyEcology Evolution Behavior and Systematics
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Measuring environmental performance in the treatment of municipal solid waste: The case of the European Union-28

2021

Abstract This paper proposes a measure of environmental performance in the treatment of municipal solid waste, which is defined as a ratio between a composite indicator of waste treated through environmentally desirable operations –recycling and recovery in our case study– and a composite indicator of waste treated through undesirable operations –landfill and incineration. Moreover, it contributes both overall and treatment-specific indicators of performance. Data Envelopment Analysis (DEA) techniques are used to compute the environmental performance indicators and they are illustrated with an empirical assessment of the environmental performance of the European Union-28 (EU-28) members in …

0106 biological sciencesQ53Municipal solid wasteEcologyMember statesGeneral Decision Sciences010501 environmental sciencesComposite indicator010603 evolutionary biology01 natural sciencesIncinerationEastern europeanC61Environmental protectionData envelopment analysismedia_common.cataloged_instancePerformance indicatorBusinessEuropean unionC10C22QH540-549.5Ecology Evolution Behavior and Systematics0105 earth and related environmental sciencesmedia_commonEcological Indicators
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Positive impacts of important bird and biodiversity areas on wintering waterbirds under changing temperatures throughout Europe and North Africa

2020

Clausen, Preben/0000-0001-8986-294X WOS: 000536149100018 Migratory waterbirds require an effectively conserved cohesive network of wetland areas throughout their range and life-cycle. Under rapid climate change, protected area (PA) networks need to be able to accommodate climate-driven range shifts in wildlife if they are to continue to be effective in the future. Thus, we investigated geographical variation in the relationship between local temperature anomaly and the abundance of 61 waterbird species during the wintering season across Europe and North Africa during 1990-2015. We also compared the spatio-temporal effects on abundance of sites designated as PAs, Important Bird and Biodivers…

0106 biological sciencesRANGE SHIFTSRange (biology):Zoology and botany: 480 [VDP]Abundance trendsBiodiversityWetlandECOSYSTEM SERVICESabundance change01 natural sciencesAbundance (ecology)density changeImportant Bird and Biodiversity Areas (IBAs)Climate changespatiotemporal analysisHABITATTEMPERATURESITESCLIMATE-CHANGEWetland conservationgeography.geographical_feature_categoryEcologyNORTH-ATLANTIC OSCILLATIONGeography1181 Ecology evolutionary biologyCONSERVATION POLICYPOPULATIONSABUNDANCENorth Atlantic OscillationDEPENDSWildlifeClimate changeECOLOGY010603 evolutionary biologywetlandsPHENOLOGICAL RESPONSERange shiftSUITABILITYWetland conservation:Zoologiske og botaniske fag: 480 [VDP]1172 Environmental sciencesEcology Evolution Behavior and SystematicsNature and Landscape ConservationBIRDSwaterbirds010604 marine biology & hydrobiologywinter distribution15. Life on landTRENDSPROTECTED AREASProtected areas13. Climate actionbiodiversity conservationProtected areaBiological Conservation
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Northern refugia and recent expansion in the North Sea: The case of the wrasse Symphodus melops (Linnaeus, 1758)

2011

Pleistocene climate changes have imposed extreme conditions to intertidal rocky marine communities, forcing many species to significant range shifts in their geographical distributions. Phylogeographic analyses based on both mitochondrial and nuclear genetic markers provide a useful approach to unravel phylogeographic patterns and processes of species after this time period, to gain general knowledge of how climatic changes affect shifts in species distributions. We analyzed these patterns on the corkwing wrasse (Symphodus melops, Labridae), a rocky shore species inhabiting North Sea waters and temperate northeastern Atlantic Ocean from Norway to Morocco including the Azores, using a fragme…

0106 biological sciencesRange (biology)Intertidal zonePhylogenetic-Relationshipsphylogeography010603 evolutionary biology01 natural sciences03 medical and health sciencesRocky shoreRefugium (population biology)LabridaeMediterranean SeaNorth seaVDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 49714. Life underwaterGlacial periodglacial refugiaEcology Evolution Behavior and SystematicsOriginal Research030304 developmental biologyNature and Landscape ConservationMitochondrial-Dna Variation0303 health sciencesbiologyEcologyEcologyGenetic-structurePopulationsMtdnaLast Glacial Maximumbiology.organism_classificationBlenniidaePhylogeography13. Climate actionAtlantic coastInterglacialAtlanticspatial variation of genetic diversityCorkwing wrasseLipophrys-Pholis Pisces
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