Search results for "ta217"

showing 10 items of 28 documents

Infrared microspectroscopic determination of collagen cross-links in articular cartilage

2017

Collagen forms an organized network in articular cartilage to give tensile stiffness to the tissue. Due to its long half-life, collagen is susceptible to cross-links caused by advanced glycation end-products. The current standard method for determination of cross-link concentrations in tissues is the destructive high-performance liquid chromatography (HPLC). The aim of this study was to analyze the cross-link concentrations nondestructively from standard unstained histological articular cartilage sections by using Fourier transform infrared (FTIR) microspectroscopy. Half of the bovine articular cartilage samples ( n = 27 ) were treated with threose to increase the collagen cross-linking whi…

0301 basic medicineCartilage ArticularGlycation End Products AdvancedcollagenSpectrophotometry InfraredPROTEOGLYCAN01 natural sciencesHigh-performance liquid chromatographychemistry.chemical_compoundBiomedicinsk laboratorievetenskap/teknologiPartial least squares regressionBiomedical Laboratory Science/Technologyinfrared spectroscopyPyridinolineThreoseChemistryMedicinsk bildbehandlingSTIFFNESSinfrapunaspektroskopiata3141AnatomyAtomic and Molecular Physics and OpticsDIFFUSIONElectronic Optical and Magnetic Materialsmedicine.anatomical_structuremultivariate analysisGLYCATION END-PRODUCTSNONENZYMATIC GLYCATIONBiomedical EngineeringInfrared spectroscopyI COLLAGENFORMALIN FIXATIONcross-linksOrthopaedicsBiomaterials03 medical and health sciencesmedicineAnimalsarticular cartilageFourier transform infrared spectroscopyPentosidineLeast-Squares Analysista217ChromatographyCartilage010401 analytical chemistry3126 Surgery anesthesiology intensive care radiology0104 chemical sciencesMedical Image Processing030104 developmental biologyOrtopedi1182 Biochemistry cell and molecular biologyCattleJournal of Biomedical Optics
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Analyzing the feasibility of time correlated spectral entropy for the assessment of neuronal synchrony

2016

In this paper, we study neuronal network analysis based on microelectrode measurements. We search for potential relations between time correlated changes in spectral distributions and synchrony for neuronal network activity. Spectral distribution is quantified by spectral entropy as a measure of uniformity/complexity and this measure is calculated as a function of time for the recorded neuronal signals, i.e., time variant spectral entropy. Time variant correlations in the spectral distributions between different parts of a neuronal network, i.e., of concurrent measurements via different microelectrodes, are calculated to express the relation with a single scalar. We demonstrate these relati…

0301 basic medicineSpectral power distributionhippocampusta3112Correlation03 medical and health sciences0302 clinical medicineStatisticsBiological neural networkAnimalsEntropy (information theory)Neuronal synchronyAnalysis methodMathematicsta217Quantitative Biology::Neurons and Cognitionta213Spectral entropybiological neural networkselectrodesrats030104 developmental biologycorrelationBiological systementropyprobesMicroelectrodes030217 neurology & neurosurgery
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Cognitive and Motor Loops of the Human Cerebro-cerebellar System

2010

Abstract We applied fMRI and diffusion-weighted MRI to study the segregation of cognitive and motor functions in the human cerebro-cerebellar system. Our fMRI results show that a load increase in a nonverbal auditory working memory task is associated with enhanced brain activity in the parietal, dorsal premotor, and lateral prefrontal cortices and in lobules VII–VIII of the posterior cerebellum, whereas a sensory-motor control task activated the motor/somatosensory, medial prefrontal, and posterior cingulate cortices and lobules V/VI of the anterior cerebellum. The load-dependent activity in the crus I/II had a specific relationship with cognitive performance: This activity correlated negat…

AdultMaleCerebellumBrain activity and meditationMovementCognitive NeuroscienceStatistics as TopicSomatosensory systemFunctional Laterality050105 experimental psychologyYoung Adult03 medical and health sciencesCognition0302 clinical medicineCerebellumNeural PathwaysImage Processing Computer-AssistedReaction TimemedicineHumansta3180501 psychology and cognitive sciencesEffects of sleep deprivation on cognitive performanceta116ta515ta217Cerebral Cortexta113Brain Mappingta114Working memory05 social sciencesCognitionMagnetic Resonance ImagingOxygenDiffusion Magnetic Resonance Imagingmedicine.anatomical_structureAcoustic Stimulationnervous systemFemalePsychologyNeuroscience030217 neurology & neurosurgeryCognitive loadTractographyJournal of Cognitive Neuroscience
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Dimension reduction: additional benefit of an optimal filter for independent component analysis to extract event-related potentials.

2011

The present study addresses benefits of a linear optimal filter (OF) for independent component analysis (ICA) in extracting brain event-related potentials (ERPs). A filter such as the digital filter is usually considered as a denoising tool. Actually, in filtering ERP recordings by an OF, the ERP' topography should not be changed by the filter, and the output should also be able to be modeled by the linear transformation. Moreover, an OF designed for a specific ERP source or component may remove noise, as well as reduce the overlap of sources and even reject some non-targeted sources in the ERP recordings. The OF can thus accomplish both the denoising and dimension reduction (reducing the n…

AdultMaleUnderdetermined systemSpeech recognitionNoise reductionYoung AdultHumansChildEvoked Potentialsta515ta217Mathematicsta113Principal Component Analysisbusiness.industryGeneral NeuroscienceDimensionality reductionPattern recognitionElectroencephalographyFilter (signal processing)Independent component analysisNoisePrincipal component analysisLinear ModelsFemaleArtificial intelligencebusinessDigital filterPhotic StimulationJournal of neuroscience methods
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P 042 - Gait complexity quantified using inertial measurement units in children with cerebral palsy

2018

Abstract Children with cerebral palsy (CP) have gait impairments, and their gait is affected by concurrent tasks. We used inertial measurement units (IMU) to quantify CP-related gait complexity alterations, and identify effects of dual tasks on gait variability from 12 children with CP and 23 typically developed (TD) controls. The data were collected for normal and dual-tasks (motor; carrying a tray, cognitive; word naming) during walking. Step duration and adjusted multiscale entropy (MSE) index were computed. In overall, children with CP had shorter step duration and greater gait complexity than TD. Gait complexity was higher in vertical direction during the cognitive than normal and moto…

CP-oireyhtymämedicine.medical_specialtyKinematicsGait kinematicstasapainoBiophysicslapset (ikäryhmät)WalkingKinematicsCerebral palsyMultiscale entropy03 medical and health sciencesUnits of measurement0302 clinical medicineGait (human)Physical medicine and rehabilitationchildrenInertial measurement unitMedicineOrthopedics and Sports Medicine030212 general & internal medicineta315ta217cerebral palsy (CP)business.industryCP-vammaisetRehabilitationGait variabilitykehonhallintaCognitionmedicine.diseaseDual-taskCerebral palsybusinessStabilityhuman activities030217 neurology & neurosurgeryGait & Posture
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Association between radiography-based subchondral bone structure and MRI-based cartilage composition in postmenopausal women with mild osteoarthritis

2016

Summary Objective Our aim was to investigate the relation between radiograph-based subchondral bone structure and cartilage composition assessed with delayed gadolinium enhanced magnetic resonance imaging of cartilage (dGEMRIC) and T 2 relaxation time. Design Ninety-three postmenopausal women (Kellgren–Lawrence grade 0: n  = 13, 1: n  = 26, 2: n  = 54) were included. Radiograph-based bone structure was assessed using entropy of the Laplacian-based image ( E Lap ) and local binary patterns ( E LBP ), homogeneity indices of the local angles (HI Angles,mean , HI Angles,Perp , HI Angles,Paral ), and horizontal (FD Hor ) and vertical fractal dimensions (FD Ver ). Mean dGEMRIC index and T 2 relax…

Cartilage ArticularpolvetRadiographyluuContrast MediaGadoliniumrustoOsteoarthritisSeverity of Illness Indexbone030218 nuclear medicine & medical imaging0302 clinical medicinemagneettitutkimusOrthopedics and Sports Medicineta315kneesradiographersta3141AnatomyMiddle AgedOsteoarthritis KneeMagnetic Resonance ImagingPostmenopauseTrabecular bonemedicine.anatomical_structureSubchondral boneFemaleradiographyMRInivelrikkobone structureBiomedical Engineering03 medical and health sciencesRheumatologymedicineHumansAgedta217030203 arthritis & rheumatologyPostmenopausal womenTibiabusiness.industryCartilageröntgentutkimusDelayed Gadolinium Enhanced Magnetic Resonance Imaging of Cartilagemedicine.diseasecartilage compositionosteoarthritisCross-Sectional StudiesbusinessBone structureOsteoarthritis and Cartilage
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Multi-modality of polysomnography signals’ fusion for automatic sleep scoring

2019

Abstract Objective The study aims to develop an automatic sleep scoring method by fusing different polysomnography (PSG) signals and further to investigate PSG signals’ contribution to the scoring result. Methods Eight combinations of four modalities of PSG signals, namely electroencephalogram (EEG), electrooculogram (EOG), electromyogram (EMG), and electrocardiogram (ECG) were considered to find the optimal fusion of PSG signals. A total of 232 features, covering statistical characters, frequency characters, time-frequency characters, fractal characters, entropy characters and nonlinear characters, were derived from these PSG signals. To select the optimal features for each signal fusion, …

Computer science0206 medical engineeringHealth InformaticsFeature selection02 engineering and technologyPolysomnographyElectroencephalographyta3112Approximate entropy03 medical and health sciences0302 clinical medicinepolysomnographymedicineEntropy (information theory)aivotutkimusta217ta113Sleep Stagesmedicine.diagnostic_testsignaalinkäsittelybusiness.industryPattern recognitionautomatic sleep scoringMutual informationuni (biologiset ilmiöt)020601 biomedical engineeringmulti-modality analysisRandom forestSignal ProcessingArtificial intelligencebusiness030217 neurology & neurosurgeryBiomedical Signal Processing and Control
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Quantification and automatized adaptive detection of in vivo and in vitro neuronal bursts based on signal complexity.

2015

In this paper, we propose employing entropy values to quantify action potential bursts in electrophysiological measurements from the brain and neuronal cultures. Conventionally in the electrophysiological signal analysis, bursts are quantified by means of conventional measures such as their durations, and number of spikes in bursts. Here our main aim is to device metrics for burst quantification to provide for enhanced burst characterization. Entropy is a widely employed measure to quantify regularity/complexity of time series. Specifically, we investigate the applicability and differences of spectral entropy and sample entropy in the quantification of bursts in in vivo rat hippocampal meas…

Computer scienceQuantitative Biology::Tissues and OrgansAstrophysics::High Energy Astrophysical PhenomenaEntropyCell Culture TechniquesElectrophysiological PhenomenaAction Potentialsta3112HippocampusEntropy (classical thermodynamics)In vivoEntropy (information theory)AnimalsEntropy (energy dispersal)Rats WistarEntropy (arrow of time)ta217NeuronsSignal processingQuantitative Biology::Neurons and Cognitionta213Entropy (statistical thermodynamics)Signal Processing Computer-Assistedadaptive detectionelectrophysiological signal analysisquantificationneuronal burstsElectrophysiological PhenomenaSample entropyElectrophysiologyElectrophysiologyMicroelectrodeBiological systemNeuroscienceMicroelectrodesEntropy (order and disorder)Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
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Compensation of missing wedge effects with sequential statistical reconstruction in electron tomography.

2014

Electron tomography (ET) of biological samples is used to study the organization and the structure of the whole cell and subcellular complexes in great detail. However, projections cannot be acquired over full tilt angle range with biological samples in electron microscopy. ET image reconstruction can be considered an ill-posed problem because of this missing information. This results in artifacts, seen as the loss of three-dimensional (3D) resolution in the reconstructed images. The goal of this study was to achieve isotropic resolution with a statistical reconstruction method, sequential maximum a posteriori expectation maximization (sMAP-EM), using no prior morphological knowledge about …

Electron Microscope TomographyComputer scienceImage Processinglcsh:MedicineBioinformaticsDiagnostic Radiologylaw.inventionComputer-AssistedMathematical and Statistical TechniqueslawImage Processing Computer-AssistedMedicine and Health SciencesElectron Microscopylcsh:ScienceTomographyMicroscopyMultidisciplinaryMaximum Likelihood EstimationPhysical SciencesBiomedical ImagingTomographyCellular Structures and OrganellesArtifactsAlgorithmAlgorithmsStatistics (Mathematics)Research ArticleGeneral Science & TechnologyImaging TechniquesBioengineeringImage processingIterative reconstructionResearch and Analysis MethodsImaging phantomElectron Beam TomographyDiagnostic MedicineExpectation–maximization algorithmMaximum a posteriori estimationStatistical Methodsta217lcsh:Rta1182Biology and Life SciencesComputational BiologyCell BiologyElectron tomographyTransmission Electron Microscopylcsh:QGeneric health relevanceElectron microscopeMathematicsElectron Microscope TomographyPLoS ONE
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Obstructing propagation of interfering modes improves detection of guided waves in coated bone models

2014

Interference due to wave propagation in soft tissue that covers the bone is a major challenge to in vivo assessment of the fundamental flexural guided wave (FFGW) in bone. To improve signal-to-interference ratio (SIR) we propose to obstruct the propagation of interfering modes by locally deforming the coating by external mechanical compression. This approach was modeled by 2D finite-element transient domain (FEMTD) simulations in a fluid-coated (7 mm) solid plate (3 mm). The fluid layer mimics the soft tissue that covers the bone. A single emitter or a 6-element phased array excited ultrasound pulses at 50 kHz on the surface of the coating, and a receiver array was placed on the surface, 20…

Guided wave testingMaterials scienceta114Wave propagationPhased arraybusiness.industryWave packetDeformation (meteorology)engineering.materialOpticsInterference (communication)CoatingengineeringbusinessCommon emitterta217
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